comparison scater-plot-dist-scatter.xml @ 2:81e5bdff4853 draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scater commit 154318f74839a4481c7c68993c4fb745842c4cce"

1:2e41b35b5bdd

<tool id="scater_plot_dist_scatter" name="Scater: plot library QC" version="@TOOL_VERSION@">
    <description>Create plots to visualise library size, feature counts and mito gene expression</description>
    <macros>
        <import>macros.xml</import>
    </macros>
    <expand macro="requirements">
        <requirement type="package" version="0.2.2">r-ggpubr</requirement>
        <requirement type="package" version="1.0.0">r-scales</requirement>
    </expand>
    <command detect_errors="exit_code"><![CDATA[
Rscript '$__tool_directory__/scater-plot-dist-scatter.R'
-i '$input_loom'
-o '$output_plot'

2:81e5bdff4853

<tool id="scater_plot_dist_scatter" name="Scater: plot library QC" version="@TOOL_VERSION@" profile="@PROFILE@">
    <description>to visualise library size, feature counts and mito gene expression</description>
    <expand macro="bio_tools"/>
    <macros>
        <import>macros.xml</import>
    </macros>
    <expand macro="requirements">
        <requirement type="package" version="0.4.0">r-ggpubr</requirement>
        <requirement type="package" version="1.1.1">r-scales</requirement>
    </expand>
    <command detect_errors="exit_code"><![CDATA[
Rscript '$__tool_directory__/scater-plot-dist-scatter.R'
-i '$input_loom'
-o '$output_plot'