Mercurial > repos > iuc > semibin_train
comparison train.xml @ 2:8b77643cf479 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/semibin commit 13abac83068b126399ec415141007a48c2efaa84
author | iuc |
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date | Fri, 10 Nov 2023 20:49:30 +0000 |
parents | 43df7a4c33a2 |
children |
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1:43df7a4c33a2 | 2:8b77643cf479 |
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24 #else | 24 #else |
25 ln -s '$e' '${identifier}.fasta' && | 25 ln -s '$e' '${identifier}.fasta' && |
26 #end if | 26 #end if |
27 #end for | 27 #end for |
28 #end if | 28 #end if |
29 SemiBin train | 29 SemiBin2 train_semi |
30 --mode '$mode.select' | |
31 #if $mode.select == 'single' | 30 #if $mode.select == 'single' |
32 --input-fasta 'contigs.fasta' | 31 --input-fasta 'contigs.fasta' |
33 --data '$mode.data' | 32 --data '$mode.data' |
34 --data-split '$mode.data_split' | 33 --data-split '$mode.data_split' |
35 --cannot-link '$mode.cannot_link' | 34 --cannot-link '$mode.cannot_link' |
36 #else | 35 #else |
36 --train-from-many | |
37 #for $e in $mode.input_fasta | 37 #for $e in $mode.input_fasta |
38 --input-fasta '${e.element_identifier}.fasta' | 38 --input-fasta '${e.element_identifier}.fasta' |
39 #end for | 39 #end for |
40 #for $e in $mode.data | 40 #for $e in $mode.data |
41 --data '$e' | 41 --data '$e' |