Mercurial > repos > iuc > seqkit_split2
comparison seqkit_split2.xml @ 3:0c7fadfe52e2 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/seqkit commit 3f642e2789c23709a041d4165285bcdce9a5c135
| author | iuc |
|---|---|
| date | Thu, 05 Mar 2026 14:04:18 +0000 |
| parents | 911de3a36b31 |
| children |
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| 2:22a535d54360 | 3:0c7fadfe52e2 |
|---|---|
| 138 <param name="by_part" value="2"/> | 138 <param name="by_part" value="2"/> |
| 139 </conditional> | 139 </conditional> |
| 140 <output_collection name="outputs_files" type="list" count="2"> | 140 <output_collection name="outputs_files" type="list" count="2"> |
| 141 <element name="seqkit_split2.part_001" ftype="fastqsanger.gz"> | 141 <element name="seqkit_split2.part_001" ftype="fastqsanger.gz"> |
| 142 <assert_contents> | 142 <assert_contents> |
| 143 <has_n_lines n="4958"/> | 143 <has_n_lines n="4949"/> |
| 144 </assert_contents> | 144 </assert_contents> |
| 145 </element> | 145 </element> |
| 146 <element name="seqkit_split2.part_002" ftype="fastqsanger.gz"> | 146 <element name="seqkit_split2.part_002" ftype="fastqsanger.gz"> |
| 147 <assert_contents> | 147 <assert_contents> |
| 148 <has_n_lines n="4949"/> | 148 <has_n_lines n="4955"/> |
| 149 </assert_contents> | 149 </assert_contents> |
| 150 </element> | 150 </element> |
| 151 </output_collection> | 151 </output_collection> |
| 152 </test> | 152 </test> |
| 153 | 153 |
| 168 </conditional> | 168 </conditional> |
| 169 <output_collection name="outputs_paired_files" type="list:paired" count="2"> | 169 <output_collection name="outputs_paired_files" type="list:paired" count="2"> |
| 170 <element name="seqkit_split2_001"> | 170 <element name="seqkit_split2_001"> |
| 171 <element name="forward" ftype="fastqsanger.gz"> | 171 <element name="forward" ftype="fastqsanger.gz"> |
| 172 <assert_contents> | 172 <assert_contents> |
| 173 <has_n_lines n="4958"/> | |
| 174 </assert_contents> | |
| 175 </element> | |
| 176 <element name="reverse" ftype="fastqsanger.gz"> | |
| 177 <assert_contents> | |
| 178 <has_n_lines n="3792"/> | |
| 179 </assert_contents> | |
| 180 </element> | |
| 181 </element> | |
| 182 <element name="seqkit_split2_002"> | |
| 183 <element name="forward" ftype="fastqsanger.gz"> | |
| 184 <assert_contents> | |
| 185 <has_n_lines n="4949"/> | 173 <has_n_lines n="4949"/> |
| 186 </assert_contents> | 174 </assert_contents> |
| 187 </element> | 175 </element> |
| 188 <element name="reverse" ftype="fastqsanger.gz"> | 176 <element name="reverse" ftype="fastqsanger.gz"> |
| 189 <assert_contents> | 177 <assert_contents> |
| 190 <has_n_lines n="3657"/> | 178 <has_n_lines n="3710"/> |
| 179 </assert_contents> | |
| 180 </element> | |
| 181 </element> | |
| 182 <element name="seqkit_split2_002"> | |
| 183 <element name="forward" ftype="fastqsanger.gz"> | |
| 184 <assert_contents> | |
| 185 <has_n_lines n="4955"/> | |
| 186 </assert_contents> | |
| 187 </element> | |
| 188 <element name="reverse" ftype="fastqsanger.gz"> | |
| 189 <assert_contents> | |
| 190 <has_n_lines n="3782"/> | |
| 191 </assert_contents> | 191 </assert_contents> |
| 192 </element> | 192 </element> |
| 193 </element> | 193 </element> |
| 194 </output_collection> | 194 </output_collection> |
| 195 </test> | 195 </test> |
| 205 <param name="by_part" value="2"/> | 205 <param name="by_part" value="2"/> |
| 206 </conditional> | 206 </conditional> |
| 207 <output_collection name="outputs_files" type="list" count="2"> | 207 <output_collection name="outputs_files" type="list" count="2"> |
| 208 <element name="seqkit_split2.part_001" ftype="fasta.gz"> | 208 <element name="seqkit_split2.part_001" ftype="fasta.gz"> |
| 209 <assert_contents> | 209 <assert_contents> |
| 210 <has_n_lines n="2988"/> | 210 <has_n_lines n="2937"/> |
| 211 </assert_contents> | 211 </assert_contents> |
| 212 </element> | 212 </element> |
| 213 <element name="seqkit_split2.part_002" ftype="fasta.gz"> | 213 <element name="seqkit_split2.part_002" ftype="fasta.gz"> |
| 214 <assert_contents> | 214 <assert_contents> |
| 215 <has_n_lines n="2987"/> | 215 <has_n_lines n="2904"/> |
| 216 </assert_contents> | 216 </assert_contents> |
| 217 </element> | 217 </element> |
| 218 </output_collection> | 218 </output_collection> |
| 219 </test> | 219 </test> |
| 220 | 220 |
| 253 <param name="by_length" value="50K"/> | 253 <param name="by_length" value="50K"/> |
| 254 </conditional> | 254 </conditional> |
| 255 <output_collection name="outputs_files" type="list" count="10"> | 255 <output_collection name="outputs_files" type="list" count="10"> |
| 256 <element name="seqkit_split2.part_001" ftype="fasta.gz"> | 256 <element name="seqkit_split2.part_001" ftype="fasta.gz"> |
| 257 <assert_contents> | 257 <assert_contents> |
| 258 <has_n_lines n="642"/> | 258 <has_n_lines n="643"/> |
| 259 </assert_contents> | 259 </assert_contents> |
| 260 </element> | 260 </element> |
| 261 <element name="seqkit_split2.part_002" ftype="fasta.gz"> | 261 <element name="seqkit_split2.part_002" ftype="fasta.gz"> |
| 262 <assert_contents> | 262 <assert_contents> |
| 263 <has_n_lines n="589"/> | 263 <has_n_lines n="608"/> |
| 264 </assert_contents> | 264 </assert_contents> |
| 265 </element> | 265 </element> |
| 266 </output_collection> | 266 </output_collection> |
| 267 </test> | 267 </test> |
| 268 </tests> | 268 </tests> |