comparison seqtk_mutfa.xml @ 9:4b494533146a draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/seqtk commit 2f75805e2e6cfa2af15076e6f4929b87631360a6

8:3da72230c066

<?xml version="1.0"?>
<tool id="seqtk_mutfa" name="seqtk_mutfa" version="@TOOL_VERSION@.1">
    <description>point mutate FASTA at specified positions</description>
    <expand macro="bio_tools"/>
    <macros>
        <import>macros.xml</import>
    </macros>
    <expand macro="requirements"/>
    <expand macro="stdio"/>
    <command><![CDATA[
seqtk mutfa
'$in_file'

    <inputs>
        <expand macro="in_faq"/>
        <param name="in_snp" type="data" format="tabular" label="Input SNP file"/>
    </inputs>
    <outputs>
        <data name="default" format_source="in_file" label="Mutated $in_file.name"/>
    </outputs>
    <tests>
        <test>
            <param name="in_file" value="seqtk_mutfa.fa"/>
            <param name="in_snp" value="seqtk_mutfa.snp"/>

9:4b494533146a

<?xml version="1.0"?>
<tool id="seqtk_mutfa" name="seqtk_mutfa" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="22.05">
    <description>point mutate FASTA at specified positions</description>
    <macros>
        <import>macros.xml</import>
    </macros>
    <expand macro="bio_tools"/>
    <expand macro="requirements"/>
    <expand macro="stdio"/>
    <command><![CDATA[
seqtk mutfa
'$in_file'

    <inputs>
        <expand macro="in_faq"/>
        <param name="in_snp" type="data" format="tabular" label="Input SNP file"/>
    </inputs>
    <outputs>
        <data name="default" format_source="in_file" label="${tool.name} on ${on_string}: Mutated"/>
    </outputs>
    <tests>
        <test>
            <param name="in_file" value="seqtk_mutfa.fa"/>
            <param name="in_snp" value="seqtk_mutfa.snp"/>