Mercurial > repos > iuc > seqtk
comparison macros.xml @ 3:bc7d99f46a5d draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/seqtk commit 7379d9f8823d3c639c8119b116e141d0a736ca1d
author | iuc |
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date | Mon, 05 Jun 2017 13:27:11 -0400 |
parents | f73729b62b51 |
children | ecf1c30da3a2 |
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2:f73729b62b51 | 3:bc7d99f46a5d |
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1 <?xml version="1.0"?> | 1 <?xml version="1.0"?> |
2 <macros> | 2 <macros> |
3 <xml name="requirements"> | 3 <xml name="requirements"> |
4 <requirements> | 4 <requirements> |
5 <requirement type="package" version="1.0-r75-dirty">seqtk</requirement> | 5 <requirement type="package" version="1.2">seqtk</requirement> |
6 <yield/> | 6 <yield/> |
7 </requirements> | 7 </requirements> |
8 </xml> | 8 </xml> |
9 <token name="@WRAPPER_VERSION@">1.0-r75-dirty</token> | 9 <token name="@WRAPPER_VERSION@">1.2</token> |
10 <xml name="stdio"> | 10 <xml name="stdio"> |
11 <stdio> | 11 <stdio> |
12 <!-- Anything other than zero is an error --> | 12 <!-- Anything other than zero is an error --> |
13 <exit_code range="1:"/> | 13 <exit_code range="1:"/> |
14 <exit_code range=":-1"/> | 14 <exit_code range=":-1"/> |
15 <!-- In case the return code has not been set propery check stderr too --> | 15 <!-- In case the return code has not been set propery check stderr too --> |
16 <regex match="Error:"/> | 16 <regex match="Error:"/> |
17 <regex match="Exception:"/> | 17 <regex match="Exception:"/> |
18 </stdio> | 18 </stdio> |
19 </xml> | 19 </xml> |
20 <xml name="in_fq"> | 20 <xml name="in_fq"> |
21 <param name="in_file" type="data" format="fastq" label="Input FASTQ file"/> | 21 <param name="in_file" type="data" format="fastq" label="Input FASTQ file"/> |
22 </xml> | 22 </xml> |
23 <xml name="in_faq"> | 23 <xml name="in_faq"> |
24 <param name="in_file" type="data" format="fasta,fastq" label="Input FASTA/Q file"/> | 24 <param name="in_file" type="data" format="fasta,fastq" label="Input FASTA/Q file"/> |
25 </xml> | 25 </xml> |
26 <token name="@ATTRIBUTION@"><![CDATA[ | 26 <token name="@ATTRIBUTION@"><![CDATA[ |
27 **Attribution** | 27 **Attribution** |
28 | 28 |
29 This Galaxy tool relies on the seqtk toolkit from `lh3/seqtk | 29 This Galaxy tool relies on the seqtk toolkit from `lh3/seqtk |
30 <https://github.com/lh3/seqtk/>`_, developed by Heng Li at the Broad Institute | 30 <https://github.com/lh3/seqtk/>`_, developed by Heng Li at the Broad Institute |
31 ]]> | 31 ]]></token> |
32 </token> | 32 <xml name="citation"> |
33 <xml name="citation"> | 33 <citations> |
34 <citations> | 34 </citations> |
35 </citations> | 35 </xml> |
36 </xml> | |
37 </macros> | 36 </macros> |