comparison seqtk_subseq.xml @ 9:4b494533146a draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/seqtk commit 2f75805e2e6cfa2af15076e6f4929b87631360a6

8:3da72230c066

<?xml version="1.0"?>
<tool id="seqtk_subseq" name="seqtk_subseq" version="@TOOL_VERSION@.1">
    <description>extract subsequences from FASTA/Q files</description>
    <expand macro="bio_tools"/>
    <macros>
        <import>macros.xml</import>
        <requirement type="package" version="@AWK_VERSION@">gawk</requirement>
    </macros>
    <expand macro="requirements"/>
    <expand macro="stdio"/>
    <command><![CDATA[
seqtk subseq
$t

        </conditional>
        <param argument="-t" type="boolean" truevalue="-t" falsevalue="" label="TAB delimited output" />
        <param argument="-l" type="integer" value="0" label="Sequence line length" />
    </inputs>
    <outputs>
        <data name="default" format_source="in_file" label="Selected sequences from $in_file.name">
            <change_format>
                <when input="t" value="-t" format="tabular"/>
            </change_format>
        </data>
    </outputs>

9:4b494533146a

<?xml version="1.0"?>
<tool id="seqtk_subseq" name="seqtk_subseq" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="22.05">
    <description>extract subsequences from FASTA/Q files</description>
    <macros>
        <import>macros.xml</import>
        <requirement type="package" version="@AWK_VERSION@">gawk</requirement>
    </macros>
    <expand macro="bio_tools"/>
    <expand macro="requirements"/>
    <expand macro="stdio"/>
    <command><![CDATA[
seqtk subseq
$t

        </conditional>
        <param argument="-t" type="boolean" truevalue="-t" falsevalue="" label="TAB delimited output" />
        <param argument="-l" type="integer" value="0" label="Sequence line length" />
    </inputs>
    <outputs>
        <data name="default" format_source="in_file" label="${tool.name} on ${on_string}: Selected sequences">
            <change_format>
                <when input="t" value="-t" format="tabular"/>
            </change_format>
        </data>
    </outputs>