Mercurial > repos > iuc > seqtk
diff seqtk_mergepe.xml @ 5:a09586d5149a draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/seqtk commit 83ecfe7d9bbf03c91f27ba18776352a1ebf8cf6f
author | iuc |
---|---|
date | Fri, 11 Jan 2019 05:15:20 -0500 |
parents | ecf1c30da3a2 |
children | 58c8ece95b53 |
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--- a/seqtk_mergepe.xml Wed Oct 17 05:59:21 2018 -0400 +++ b/seqtk_mergepe.xml Fri Jan 11 05:15:20 2019 -0500 @@ -1,5 +1,5 @@ <?xml version="1.0"?> -<tool id="seqtk_mergepe" name="seqtk_mergepe" version="@WRAPPER_VERSION@.0"> +<tool id="seqtk_mergepe" name="seqtk_mergepe" version="@TOOL_VERSION@.1"> <description>interleave two unpaired FASTA/Q files for a paired-end file</description> <macros> <import>macros.xml</import> @@ -10,7 +10,7 @@ seqtk mergepe '$in_fq1' '$in_fq2' - #echo "| gzip --no-name" if $in_fq1.is_of_type('fasta.gz', 'fastq.gz') else "" # > '$default' + #echo "| pigz --no-name --no-time" if $in_fq1.is_of_type('fasta.gz', 'fastq.gz') else "" # > '$default' ]]></command> <inputs> <param name="in_fq1" type="data" format="fasta,fastq,fasta.gz,fastq.gz" label="Input FASTA/Q file #1"/>