diff seqtk_randbase.xml @ 3:bc7d99f46a5d draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/seqtk commit 7379d9f8823d3c639c8119b116e141d0a736ca1d
author iuc
date Mon, 05 Jun 2017 13:27:11 -0400
parents f73729b62b51
children ecf1c30da3a2
line wrap: on
line diff
--- a/seqtk_randbase.xml	Fri Jan 01 14:49:42 2016 -0500
+++ b/seqtk_randbase.xml	Mon Jun 05 13:27:11 2017 -0400
@@ -1,27 +1,29 @@
 <?xml version="1.0"?>
 <tool id="seqtk_randbase" name="seqtk_randbase" version="@WRAPPER_VERSION@.0">
-  <description>choose a random base from hets</description>
-  <macros>
-    <import>macros.xml</import>
-  </macros>
-  <expand macro="requirements"/>
-  <expand macro="stdio"/>
-  <command><![CDATA[seqtk randbase
-      $in_file
-> $default]]></command>
-  <inputs>
-    <expand macro="in_faq"/>
-  </inputs>
-  <outputs>
-    <data format_source="in_file" hidden="false" name="default" label="Unambiguous $in_file.name"/>
-  </outputs>
-  <tests>
-    <test>
-      <param name="in_file" value="seqtk_randbase.fa"/>
-      <output name="default" file="seqtk_randbase.out" ftype="fasta"/>
-    </test>
-  </tests>
-  <help><![CDATA[
+    <description>choose a random base from hets</description>
+    <macros>
+        <import>macros.xml</import>
+    </macros>
+    <expand macro="requirements"/>
+    <expand macro="stdio"/>
+    <command><![CDATA[
+seqtk randbase
+'$in_file'
+> '$default'
+    ]]></command>
+    <inputs>
+        <expand macro="in_faq"/>
+    </inputs>
+    <outputs>
+        <data name="default" format_source="in_file" label="Unambiguous $in_file.name"/>
+    </outputs>
+    <tests>
+        <test>
+            <param name="in_file" value="seqtk_randbase.fa"/>
+            <output name="default" file="seqtk_randbase.out" ftype="fasta"/>
+        </test>
+    </tests>
+    <help><![CDATA[
 **What it does**
 
 Randomly resolves ambiguous bases
@@ -41,6 +43,6 @@
     ACGTCGTGTT
 
 @ATTRIBUTION@
-]]></help>
-  <expand macro="citation" />
+    ]]></help>
+    <expand macro="citation" />
 </tool>