Mercurial > repos > iuc > seqtk
changeset 9:4b494533146a draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/seqtk commit 2f75805e2e6cfa2af15076e6f4929b87631360a6
author | iuc |
---|---|
date | Sat, 09 Dec 2023 11:14:21 +0000 |
parents | 3da72230c066 |
children | a019807f4e67 |
files | macros.xml seqtk_comp.xml seqtk_cutN.xml seqtk_dropse.xml seqtk_fqchk.xml seqtk_hety.xml seqtk_listhet.xml seqtk_mergefa.xml seqtk_mergepe.xml seqtk_mutfa.xml seqtk_randbase.xml seqtk_sample.xml seqtk_seq.xml seqtk_subseq.xml seqtk_telo.xml seqtk_trimfq.xml test-data/seqtk_telo.fa test-data/seqtk_telo.fa.gz test-data/seqtk_telo.out test-data/seqtk_telogz.out |
diffstat | 20 files changed, 253 insertions(+), 44 deletions(-) [+] |
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--- a/macros.xml Thu Oct 14 09:22:39 2021 +0000 +++ b/macros.xml Sat Dec 09 11:14:21 2023 +0000 @@ -12,7 +12,8 @@ <xref type="bio.tools">seqtk</xref> </xrefs> </xml> - <token name="@TOOL_VERSION@">1.3</token> + <token name="@TOOL_VERSION@">1.4</token> + <token name="@VERSION_SUFFIX@">0</token> <token name="@AWK_VERSION@">4.2.1</token> <xml name="stdio"> <stdio> @@ -41,6 +42,17 @@ ]]></token> <xml name="citation"> <citations> + <citation type="bibtex"> + @misc{seqtk, + author = {Heng Li}, + year = {2023}, + title = {seqtk}, + publisher = {GitHub}, + journal = {GitHub repository}, + howpublished{\url{https://github.com/lh3/seqtk}}, + } + </citation> </citations> </xml> + </macros>
--- a/seqtk_comp.xml Thu Oct 14 09:22:39 2021 +0000 +++ b/seqtk_comp.xml Sat Dec 09 11:14:21 2023 +0000 @@ -1,10 +1,10 @@ <?xml version="1.0"?> -<tool id="seqtk_comp" name="seqtk_comp" version="@TOOL_VERSION@.1"> +<tool id="seqtk_comp" name="seqtk_comp" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="22.05"> <description>get the nucleotide composition of FASTA/Q</description> - <expand macro="bio_tools"/> <macros> <import>macros.xml</import> </macros> + <expand macro="bio_tools"/> <expand macro="requirements"> <requirement type="package" version="@AWK_VERSION@">gawk</requirement> </expand> @@ -22,7 +22,7 @@ <param name="in_bed" type="data" format="bed" optional="true" label="BED file"/> </inputs> <outputs> - <data name="default" format="tabular" label="Nucleotide composition of $in_file.name"/> + <data name="default" format="tabular" label="${tool.name} on ${on_string}: Nucleotide composition"/> </outputs> <tests> <test>
--- a/seqtk_cutN.xml Thu Oct 14 09:22:39 2021 +0000 +++ b/seqtk_cutN.xml Sat Dec 09 11:14:21 2023 +0000 @@ -1,10 +1,9 @@ -<?xml version="1.0"?> -<tool id="seqtk_cutN" name="seqtk_cutN" version="@TOOL_VERSION@.1"> +<tool id="seqtk_cutN" name="seqtk_cutN" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="22.05"> <description>cut sequence at long N</description> - <expand macro="bio_tools"/> <macros> <import>macros.xml</import> </macros> + <expand macro="bio_tools"/> <expand macro="requirements"/> <expand macro="stdio"/> <command><![CDATA[ @@ -22,7 +21,11 @@ <param argument="-g" type="boolean" truevalue="-g" falsevalue="" checked="false" label="Print gaps only, no sequence" /> </inputs> <outputs> - <data name="default" format_source="in_file" label="$in_file.name split on N runs longer than $n"/> + <data name="default" format_source="in_file" label="${tool.name} on ${on_string}: split on N runs longer than $n"> + <change_format> + <when input="g" value="-g" format="bed" /> + </change_format> + </data> </outputs> <tests> <test>
--- a/seqtk_dropse.xml Thu Oct 14 09:22:39 2021 +0000 +++ b/seqtk_dropse.xml Sat Dec 09 11:14:21 2023 +0000 @@ -1,10 +1,10 @@ <?xml version="1.0"?> -<tool id="seqtk_dropse" name="seqtk_dropse" version="@TOOL_VERSION@.1"> +<tool id="seqtk_dropse" name="seqtk_dropse" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="22.05"> <description>drop unpaired from interleaved Paired End FASTA/Q</description> - <expand macro="bio_tools"/> <macros> <import>macros.xml</import> </macros> + <expand macro="bio_tools"/> <expand macro="requirements"/> <expand macro="stdio"/> <command><![CDATA[ @@ -16,7 +16,7 @@ <expand macro="in_faq"/> </inputs> <outputs> - <data name="default" format_source="in_file" label="Only paired-end reads from $in_file.name"/> + <data name="default" format_source="in_file" label="${tool.name} on ${on_string}: only paired-end reads"/> </outputs> <tests> <test>
--- a/seqtk_fqchk.xml Thu Oct 14 09:22:39 2021 +0000 +++ b/seqtk_fqchk.xml Sat Dec 09 11:14:21 2023 +0000 @@ -1,10 +1,10 @@ <?xml version="1.0"?> -<tool id="seqtk_fqchk" name="seqtk_fqchk" version="@TOOL_VERSION@.1"> +<tool id="seqtk_fqchk" name="seqtk_fqchk" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="22.05"> <description>fastq QC (base/quality summary)</description> - <expand macro="bio_tools"/> <macros> <import>macros.xml</import> </macros> + <expand macro="bio_tools"/> <expand macro="requirements"> <requirement type="package" version="@AWK_VERSION@">gawk</requirement> </expand> @@ -20,7 +20,7 @@ <param argument="-q" type="integer" value="20" label="Quality values" help="Use 0 to get the distribution of all quality values"/> </inputs> <outputs> - <data name="default" format="tabular" label="Quality information for $in_file.name"/> + <data name="default" format="tabular" label="${tool.name} on ${on_string}: Quality information"/> </outputs> <tests> <test>
--- a/seqtk_hety.xml Thu Oct 14 09:22:39 2021 +0000 +++ b/seqtk_hety.xml Sat Dec 09 11:14:21 2023 +0000 @@ -1,10 +1,10 @@ <?xml version="1.0"?> -<tool id="seqtk_hety" name="seqtk_hety" version="@TOOL_VERSION@.1"> +<tool id="seqtk_hety" name="seqtk_hety" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="22.05"> <description>regional heterozygosity</description> - <expand macro="bio_tools"/> <macros> <import>macros.xml</import> </macros> + <expand macro="bio_tools"/> <expand macro="requirements"> <requirement type="package" version="@AWK_VERSION@">gawk</requirement> </expand> @@ -24,7 +24,7 @@ <param argument="-m" type="boolean" truevalue="-m" falsevalue="" checked="false" label="Treat lowercases as masked" /> </inputs> <outputs> - <data name="default" format="tabular" label="Heterozygous regions in $in_file.name"/> + <data name="default" format="tabular" label="${tool.name} on ${on_string}: Heterozygous regions"/> </outputs> <tests> <test>
--- a/seqtk_listhet.xml Thu Oct 14 09:22:39 2021 +0000 +++ b/seqtk_listhet.xml Sat Dec 09 11:14:21 2023 +0000 @@ -1,10 +1,10 @@ <?xml version="1.0"?> -<tool id="seqtk_listhet" name="seqtk_listhet" version="@TOOL_VERSION@.1"> +<tool id="seqtk_listhet" name="seqtk_listhet" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="22.05"> <description>extract the position of each het</description> - <expand macro="bio_tools"/> <macros> <import>macros.xml</import> </macros> + <expand macro="bio_tools"/> <expand macro="requirements"> <requirement type="package" version="@AWK_VERSION@">gawk</requirement> </expand> @@ -18,7 +18,7 @@ <expand macro="in_faq"/> </inputs> <outputs> - <data name="default" format="tabular" label="Positions of heterozygous bases in $in_file.name"/> + <data name="default" format="tabular" label="${tool.name} on ${on_string}: Positions of heterozygous bases"/> </outputs> <tests> <test>
--- a/seqtk_mergefa.xml Thu Oct 14 09:22:39 2021 +0000 +++ b/seqtk_mergefa.xml Sat Dec 09 11:14:21 2023 +0000 @@ -1,10 +1,10 @@ <?xml version="1.0"?> -<tool id="seqtk_mergefa" name="seqtk_mergefa" version="@TOOL_VERSION@.1"> +<tool id="seqtk_mergefa" name="seqtk_mergefa" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="22.05"> <description>merge two FASTA/Q files</description> - <expand macro="bio_tools"/> <macros> <import>macros.xml</import> </macros> + <expand macro="bio_tools"/> <expand macro="requirements"/> <expand macro="stdio"/> <command><![CDATA[ @@ -28,7 +28,7 @@ <param argument="-h" type="boolean" truevalue="-h" falsevalue="" checked="false" label="Suppress hets in the input" /> </inputs> <outputs> - <data name="default" format_source="in_fa1" label="Merger of $in_fa1.name and $in_fa2.name"/> + <data name="default" format_source="in_fa1" label="${tool.name} on ${on_string}"/> </outputs> <tests> <test>
--- a/seqtk_mergepe.xml Thu Oct 14 09:22:39 2021 +0000 +++ b/seqtk_mergepe.xml Sat Dec 09 11:14:21 2023 +0000 @@ -1,10 +1,10 @@ <?xml version="1.0"?> -<tool id="seqtk_mergepe" name="seqtk_mergepe" version="@TOOL_VERSION@.1"> +<tool id="seqtk_mergepe" name="seqtk_mergepe" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="22.05"> <description>interleave two unpaired FASTA/Q files for a paired-end file</description> - <expand macro="bio_tools"/> <macros> <import>macros.xml</import> </macros> + <expand macro="bio_tools"/> <expand macro="requirements"/> <expand macro="stdio"/> <command><![CDATA[ @@ -18,7 +18,7 @@ <param name="in_fq2" type="data" format="fasta,fastq,fasta.gz,fastq.gz" label="Input FASTA/Q file #2"/> </inputs> <outputs> - <data name="default" format_source="in_fq1" label="$in_fq1.name and $in_fq2.name as interleaved paired-end"/> + <data name="default" format_source="in_fq1" label="${tool.name} on ${on_string}: interleaved paired-end"/> </outputs> <tests> <test>
--- a/seqtk_mutfa.xml Thu Oct 14 09:22:39 2021 +0000 +++ b/seqtk_mutfa.xml Sat Dec 09 11:14:21 2023 +0000 @@ -1,10 +1,10 @@ <?xml version="1.0"?> -<tool id="seqtk_mutfa" name="seqtk_mutfa" version="@TOOL_VERSION@.1"> +<tool id="seqtk_mutfa" name="seqtk_mutfa" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="22.05"> <description>point mutate FASTA at specified positions</description> - <expand macro="bio_tools"/> <macros> <import>macros.xml</import> </macros> + <expand macro="bio_tools"/> <expand macro="requirements"/> <expand macro="stdio"/> <command><![CDATA[ @@ -18,7 +18,7 @@ <param name="in_snp" type="data" format="tabular" label="Input SNP file"/> </inputs> <outputs> - <data name="default" format_source="in_file" label="Mutated $in_file.name"/> + <data name="default" format_source="in_file" label="${tool.name} on ${on_string}: Mutated"/> </outputs> <tests> <test>
--- a/seqtk_randbase.xml Thu Oct 14 09:22:39 2021 +0000 +++ b/seqtk_randbase.xml Sat Dec 09 11:14:21 2023 +0000 @@ -1,10 +1,10 @@ <?xml version="1.0"?> -<tool id="seqtk_randbase" name="seqtk_randbase" version="@TOOL_VERSION@.1"> +<tool id="seqtk_randbase" name="seqtk_randbase" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="22.05"> <description>choose a random base from hets</description> - <expand macro="bio_tools"/> <macros> <import>macros.xml</import> </macros> + <expand macro="bio_tools"/> <expand macro="requirements"/> <expand macro="stdio"/> <command><![CDATA[ @@ -16,7 +16,7 @@ <expand macro="in_faq"/> </inputs> <outputs> - <data name="default" format_source="in_file" label="Unambiguous $in_file.name"/> + <data name="default" format_source="in_file" label="${tool.name} on ${on_string}: Unambiguous"/> </outputs> <tests> <test>
--- a/seqtk_sample.xml Thu Oct 14 09:22:39 2021 +0000 +++ b/seqtk_sample.xml Sat Dec 09 11:14:21 2023 +0000 @@ -1,10 +1,10 @@ <?xml version="1.0"?> -<tool id="seqtk_sample" name="seqtk_sample" version="@TOOL_VERSION@.2"> +<tool id="seqtk_sample" name="seqtk_sample" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="22.05"> <description>random subsample of fasta or fastq sequences</description> - <expand macro="bio_tools"/> <macros> <import>macros.xml</import> </macros> + <expand macro="bio_tools"/> <expand macro="requirements"/> <expand macro="stdio"/> <command><![CDATA[ @@ -24,7 +24,7 @@ </section> </inputs> <outputs> - <data name="default" format_source="in_file" label="Subsample of reads from $in_file.name"/> + <data name="default" format_source="in_file" label="${tool.name} on ${on_string}: Subsample of reads"/> </outputs> <tests> <test>
--- a/seqtk_seq.xml Thu Oct 14 09:22:39 2021 +0000 +++ b/seqtk_seq.xml Sat Dec 09 11:14:21 2023 +0000 @@ -1,10 +1,10 @@ <?xml version="1.0"?> -<tool id="seqtk_seq" name="seqtk_seq" version="@TOOL_VERSION@.3"> +<tool id="seqtk_seq" name="seqtk_seq" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="22.05"> <description>common transformation of FASTA/Q</description> - <expand macro="bio_tools"/> <macros> <import>macros.xml</import> </macros> + <expand macro="bio_tools"/> <expand macro="requirements"/> <expand macro="stdio"/> <command><![CDATA[ @@ -54,7 +54,7 @@ <param name="x2" argument="-2" type="boolean" truevalue="-2" falsevalue="" checked="false" label="Output the 2n reads only" /> </inputs> <outputs> - <data name="default" format_source="in_file" /> + <data name="default" format_source="in_file" label="${tool.name} on ${on_string}" /> </outputs> <tests> <!-- This is a sorry excuse for a test for a tool which does way more
--- a/seqtk_subseq.xml Thu Oct 14 09:22:39 2021 +0000 +++ b/seqtk_subseq.xml Sat Dec 09 11:14:21 2023 +0000 @@ -1,11 +1,11 @@ <?xml version="1.0"?> -<tool id="seqtk_subseq" name="seqtk_subseq" version="@TOOL_VERSION@.1"> +<tool id="seqtk_subseq" name="seqtk_subseq" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="22.05"> <description>extract subsequences from FASTA/Q files</description> - <expand macro="bio_tools"/> <macros> <import>macros.xml</import> <requirement type="package" version="@AWK_VERSION@">gawk</requirement> </macros> + <expand macro="bio_tools"/> <expand macro="requirements"/> <expand macro="stdio"/> <command><![CDATA[ @@ -41,7 +41,7 @@ <param argument="-l" type="integer" value="0" label="Sequence line length" /> </inputs> <outputs> - <data name="default" format_source="in_file" label="Selected sequences from $in_file.name"> + <data name="default" format_source="in_file" label="${tool.name} on ${on_string}: Selected sequences"> <change_format> <when input="t" value="-t" format="tabular"/> </change_format>
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/seqtk_telo.xml Sat Dec 09 11:14:21 2023 +0000 @@ -0,0 +1,61 @@ +<?xml version="1.0"?> +<tool id="seqtk_telo" name="seqtk_telo" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="22.05"> + <description>find telomeres</description> + <macros> + <import>macros.xml</import> + </macros> + <expand macro="bio_tools"/> + <expand macro="requirements"/> + <expand macro="stdio"/> + <command><![CDATA[ +seqtk telo +-m '$m' +-p '$p' +-d '$d' +-s '$s' +$P +'$in_file' +> '$default' + ]]></command> + <inputs> + <expand macro="in_faq"/> + <param argument="-m" type="text" value="CCCTAA" label="Telomere repeat to search for. Default is vertebrate" /> + <param argument="-p" type="integer" value="1" label="Penalty for a non-repeat" /> + <param argument="-d" type="integer" value="2000" label="Maximum drop" /> + <param argument="-s" type="integer" value="300" label="Minimum score" /> + <param argument="-P" type="boolean" truevalue="-P" falsevalue="" checked="false" label="Print scoring" /> + </inputs> + <outputs> + <data name="default" format="bed" label="${tool.name} on ${on_string}: telomers"/> + </outputs> + <tests> + <test> + <param name="in_file" value="seqtk_telo.fa"/> + <output name="default" file="seqtk_telo.out" ftype="bed"/> + </test> + <test> + <param name="in_file" value="seqtk_telo.fa.gz" ftype="fasta.gz"/> + <output name="default" file="seqtk_telogz.out" ftype="bed"/> + </test> + </tests> + <help><![CDATA[ +**What it does** + +Identifies telomeres using a default vertebrate repeat sequence CCCTAA, or a user supplied one + + +:: + + Usage: seqtk telo [options] <in.fq> + Options: + -m STR motif [CCCTAA] + -p INT penalty [1] + -d INT max drop [2000] + -s INT min score [300] + -P print scoring + + +@ATTRIBUTION@ + ]]></help> + <expand macro="citation" /> +</tool>
--- a/seqtk_trimfq.xml Thu Oct 14 09:22:39 2021 +0000 +++ b/seqtk_trimfq.xml Sat Dec 09 11:14:21 2023 +0000 @@ -1,10 +1,10 @@ <?xml version="1.0"?> -<tool id="seqtk_trimfq" name="seqtk_trimfq" version="@TOOL_VERSION@.1"> +<tool id="seqtk_trimfq" name="seqtk_trimfq" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="22.05"> <description>trim FASTQ using the Phred algorithm</description> - <expand macro="bio_tools"/> <macros> <import>macros.xml</import> </macros> + <expand macro="bio_tools"/> <expand macro="requirements"/> <expand macro="stdio"/> <command><![CDATA[ @@ -37,7 +37,7 @@ </conditional> </inputs> <outputs> - <data name="default" format_source="in_file" label="$in_file.name trimmed"/> + <data name="default" format_source="in_file" label="${tool.name} on ${on_string}: trimmed"/> </outputs> <tests> <test>
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/seqtk_telo.fa Sat Dec 09 11:14:21 2023 +0000 @@ -0,0 +1,131 @@ +>test +CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAA +CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAA +CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAA +CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAA +CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAA +CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAA +CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAA +CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAA +CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAA +CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAA +CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAA +CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAA +CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAA +CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAA +CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAA +CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAA +GCACTCGCCGCGAGGGTTGCCGGGACGGGCCCAAGATGGCTGAGCGCCTT +GGTTCCGCTTCTGCCTGCCGCGCAGAGCCCCATTCATTGCCTTGCTGCTA +AGTGGCGCCGCGTAGTGCCAGTAGGCTCCAAGTCTTCAGGGTCTGTCCCA +TCGGGCAGGAAGCCGTCATGGCAACCCTGGAAAAGCTGATGAAGGCTTTC +GAGTCGCTCAAGTCGTTTCAGCAGCAACAGCAGCAGCAGCCACCGCCGCA +GGCGCCGCCGCCACCGCCGCCGCCGCCTCCGCCTCAACCCCCTCAGCCGC +CGCCTCAGGGGCAGCCGCCGCCGCCACCACCGCCGCTGCCAGGTCCGGCA +GAGGAACCGCTGCACCGACCGTGAGTCCGGGCGCCGCAGCTCCCGCCCGG +GCCCCGCGCCCCTGGCCTGCGTGCTGGGCATGGCCAACACTGTTCCCTGT +CCAGAGGGTCGCGGTACCTCCCTGAGGCCAGGCTTTCCCGGCCCGGGCCC +TCGTCTTGCGGGGTCTCTGGCCTCCCTCAGAGGAGACAGAGCCGGGTCAG +GCCAGCCAGGGACTCGCTGAGGGGCGTCACGACTCCAGTGCCTTCGCCGT +TCCCAGTTTGCGAAGTTAGGGAACGAACTTGTTTCTCTCTTCTGGAGAAA +CTGGGGCGGTGGCGCACATGACTGTTGTGAAGAGAACTTGGAGAGGCAGA +GATCTCTAGGGTTACCTCCTCATCAGGCCTAAGAGCTGGGAGTGCAGGAC +AGCGTGAGAGATGTGCGGGTAGTGGATGACATAATGCTTTTAGGAGGTCT +CGGCGGGAGTGCTGAGGGCGGGGGAGTGTGAACGCATCCAATGGGATATT +CTTTTTCCAAGTGACACTTGAAGCAGCCTGTGACTCGAGGCACTTCGTAC +TCTCCTGGCGTTTCATTTAGTTTGTGGTGTAGTGTAGTTAAACCAGGTTT +TAAGCATAGCCAGAGAGGTGTGCTTCTGTGTGTCTGCAGGCAGTTGGATG +AGTTGTATTTGTCAAGTACATGGTGAGTTACTTAGGTGTGATTATTAATA +AAAAACTATATGTGTGCATATATATGAAAGAGTCGACTTATACTTAACTG +CCTATCGATTTTTTGTTCTATATAAAACGGATACATTGGTGGTGCTCAGT +TTTCACCGGGGAATGAATTTTACTAGTGTTGCAGACAGGCTTGTTTTAGA +ACATAGGCCACTCTGACTCTGACTTTGTGCCAGTAAAAGTTCCTGTTTAG +TTCTTTGCTGACATCTTATAGATCTTTGGAAGCTAGCTGCTTGTGACTGG +AGAGAATATTGAAACAGAAGAGAGACCATGAGTCACAGTGCTCTAAGAGA +AAAGAGACGCTCAAAACATTTCCTGGAAATCCATGCTGAGTGTTGAGCCC +TGTGCTCTCTTGCAGCTCAGTCCTTTCTCTCAACTCTGGGCATTTTATTT +CTAATCTGGATTTGTATAATTAATAAGGAGAACTTTTGGGAACAACCTAC +TAAAGAATGTCATCATTAAAACTCACTTAGAAAATAAGTGTTCTGGTGAT +ATCATTGAGCTATGTTCCCAGTCCTGAGAGTTTGTTTTTTTTTTTTTTTT +TAAATAAAGATTTGGGGAGAAAAGGTGGCTTACTTGATAGAACAAAATAT +AGGAATAAAATTTCCTTCTATAAGGTGAAAAGTGTGAATAGAAAACTTCT +TATCCTCTAGATAAGTAGTTTCTTTTTGCTTTTGAGAGTCTCACTATGTA +ACTCTTGACCTGAACTCAGAGAGATCCATCCTCCTGCCTCTGCCTCCTCT +CTCTGGGATTAAAGGCATGTGGCACCATGCTGGGCTGTCCAAGTATGCCA +CAGACCCTCTAGGTCCCTGGTCTTCGAGGAACGGGATTTCTTAGGCAGAT +GGGTAAGGAGTCGGATGAAAATGACAATCAGCCACACACAAGAGAGGTGT +TGAATCTGAATGTAATGTTCTGGTTGAGCTTCAGACTTATATAACAACGA +ATTATCAGAGGATACAAATCACAAAAAGACAAGATACACTGAAATTCACC +AGTTACAGCAGAAAGGAATTTGCAGGGACTAATTAAATGTTTACATTAGG +GATAACAAGCCCTGCCTAGGATCAGCCTAATGCCAGGCAAGAATTTCACA +CTTTAAGGTTAAAAGCATCAGGGGGTTGTTAACTCTTGACAGGCCTTAAG +AGTAATGTGCTATCACTGAGCTCTAAATTCTTAGGTCTAGTAAAACTTAT +CCTGTCTGGAGAGTTCCCCCTTATCAGGGTAGTATATCAACTTATACTTG +ACATGGAATGAAGCCTGTAGTAAAACATTTCTATCTCAGTGAGACTTTTA +GTCTCTATCTGTAAACAGCTGAGTAAAATGGCAAGTGCTTAATTGTTTAC +TGAATGGGTTAAGCTCCTTGCTGCTATCTGGAATCTAAGAACACTGGGGA +AAGGCTTTAGCTATGTTAGAATACAATATTAAAAGGCATTTACTATAAGG +TGATGCTTAATAGAGTGCACGTGAATCTATACACTAGATTAATGTGGTGG +AAATTTGAATATAATGGGTTAGGGAAAGAGATGCCATAACTCTGGGAGGA +AAATTTCCCTGGACTCTTATCCTCGTGAAACAGCTTCCAGGCTTTTCGCC +TGACAAACCGATCCAAACTGGAGAGTTGGCTTTCGCCAGAATATCCAGGA +GGAGAGTCCTAGAAATTCATTTCTCATGAGCAGCTTTTTGGCATTTTTGC +CTCACAAGCTGACTCCACCAGAGTACCCTGACACAAGTATTGTCTAGTTA +TTTTGATTATTACCATGACTCTGCCTCTGGGTGAGAGGAATTGTGGAAGT +TTACATATTCCCCATATCTTCTATAAACCTCTGTGTGTGTGTGTGTGTGT +GTGTGTGTGTGTGTGTGTGTGTGTATGAGGGAGAGAGAGGGAGAGAGAGA +GAGGGAGGGAGGAAGAGAGAGAGAGAGATTGTTCTGTGCCTGCTTCGAAC +ACAAATTAGTTTGCAAAAGTAATTCATTAACATGATACAGTCCCAAAGAT +AAAAATGGTTAAATAATGAAAACATCTCCCTCCCCATTTTCCTAACTTTG +TACCCAGGAGCAAGCTCTGTTACACTTCATTTGTCCTTCCAGATAAAATT +TGGGCATATGTTAGGACAGAATTTTAAATTATTTACAAACAAAAGTATTT +TGGAACAAAAGCTTTTAAAAGCTTTTATTTTAATAAAATAACTTGTTACT +ACACTGTATATAACTAACTAACATTTTCCAAAATTAGCTCCATTAGCATC +TATCTCATATTTCTATGTACTTTGCTGTTGAAAAACCAAGTGTTCATTAA +TAATAAGTAACAAACTCACTGCTTGGAAGCTTTGATTTTTGGCATTTTGT +CCACTTGACTCAGTTAAAAGTCCTTTTTTTCGAAATGAGAACAGCCAAAA +CAGTTTTAGAATGAGTCTGTTCTGCTTTTGTGACTCTCATTGTGTTCTGT +AGAACCAGTGTCACAGCCATATGTGGGCCTCTGTTGAAGTAGCTGAGAAC +TTGTTCTCTGCTCTGCTAGCTGCTGTCGATCTGATAGGCCTTGAACAGTT +GACATTCACCCTTAATAGTCCTCATTAGTCTTCCTGAGCATAGTCATTCA +TTTATCAATATTTGCTGATCATCTCCTATGTGCCTAGCATTGTTCTAGTT +GCAGGTTTTAGCAGGGAACAAAGTCATGTCTCATGAAGCTAAAATTCTTG +GGAGAGACATAGACAGTAAGCAGAATAGTTTGTTCATAGTGAGTGATGAG +GCGCATGCAGTAAAGTAGGGAAGGGGATTAGGAAATGCCAGGGCTTGACA +TGTTTTAGACAGGGTGTTTAAATAATATCTGCTTAGTTGAAGGCTTATTT +TTGAATAAATATCTGAAGAGTCAGAAATCTACCAGGAGGGTGTATGGAAG +AGGAGTATTCCTGCAAGGGGAAGTTGTCAAAGGCTTTCCTGTGTGGGGAT +TAGTGATGTCATGTTTTTGCTGGATGAAATGAGTGACGGTAAGAGTTGTA +GTGGGGGTGAAGCAAAGGGTTGAGGGAGGCTTCATTGGTGTTATCAGTTA +CTGCATTTATCTCCAAATAGAGAACGTAGCAATGAAAGCTACAGAGAACG +GGAAAGGTGAGGATTTATTCTAAGACAAAATAAGTGTAGGAAGTTTAACA +ATTAGATCAGGAGCACAGACTCCAAGTCTAAGTCTTCATTCTTGCACATT +TTTTAAAAATTTTGTTATGTGTTCTGGATACTATTTCCTTATGAGATATA +AGTTTAAAAGCCTTTCTGTGGATTGCCTTGCCTTTGTTGTTGTTGTTTGT +TTTGTTTTGTTTTGTTGAGACAGGTCTCTCTATGTAGCCTTGACTGTCCT +GAAAATCACTCTGTAGACCAGGCTGGCCTGGAACTCAGAGATCTGCCTGC +TTCTGCTTTTCAAGTGCTGATATTAAATGTATGTGCCACCACTGCCAGGC +TAAGATTGTTCTTTCAATTTCTTTTTTTGTTTTCTTTTGAGATCAAAGTT +TGCTATGTACTTTTGGCTGGCCTGGTATATTGTGTAGTCTAAGTTGGCTT +CAAATCTTCATGGCACAGATTCCCAAGTACTGGGACCATAGGTATGGCCC +ATCACAGTGGGGGGTTGGGGGGGCCAGTACATCTATCTCTTGAATGGTGT +GGAGTGTATATATGTGTTAGGGGTTTGCAGAGGCCAAAAGAATATTGAGT +GTCTTCCTCTATTGCTCGCCACTTCTCTGAATAAACCTAAAGTTACCAAT +GGATTTCTAGTAAGCTGACTGACCAGCAAATATTGGGGATCTGTCTGTCC +CTGTTCACCATAGTGAGGTTACAGACGTGAATAACCACACCCAGTTTTAA +CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAA +CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAA +CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAA +CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAA +CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAA +CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAA +CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAA +CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAA +CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAA +CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAA +CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAA +CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAA +CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAA +CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAA +CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAA +CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAA