Mercurial > repos > iuc > seqwish
comparison seqwish.xml @ 2:d90d8d79bca9 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/seqwish/ commit 9e70ae101ba20a619ea12a044d3a161cafeb2fe1"
| author | iuc |
|---|---|
| date | Wed, 21 Jul 2021 21:17:03 +0000 |
| parents | 189ae8d7e08e |
| children | ca1fb032116d |
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| 1:189ae8d7e08e | 2:d90d8d79bca9 |
|---|---|
| 1 <tool id="seqwish" name="seqwish" version="@TOOL_VERSION@" > | 1 <tool id="seqwish" name="seqwish" version="@TOOL_VERSION@" > |
| 2 <description>Alignment to variation graph inducer</description> | 2 <description>Alignment to variation graph inducer</description> |
| 3 <macros> | 3 <macros> |
| 4 <token name="@TOOL_VERSION@">0.4.1</token> | 4 <token name="@TOOL_VERSION@">0.7.1</token> |
| 5 </macros> | 5 </macros> |
| 6 <requirements> | 6 <requirements> |
| 7 <requirement type="package" version="@TOOL_VERSION@">seqwish</requirement> | 7 <requirement type="package" version="@TOOL_VERSION@">seqwish</requirement> |
| 8 </requirements> | 8 </requirements> |
| 9 <command detect_errors="exit_code"><![CDATA[ | 9 <command detect_errors="exit_code"><![CDATA[ |
| 44 | 44 |
| 45 <tests> | 45 <tests> |
| 46 <test> | 46 <test> |
| 47 <param name="seqs" value="A-3105.fa.gz" /> | 47 <param name="seqs" value="A-3105.fa.gz" /> |
| 48 <param name="paf_alns" value="A-3105.paf.gz" /> | 48 <param name="paf_alns" value="A-3105.paf.gz" /> |
| 49 <output name="out_gfa" md5="176f9b4be76a2e69550da9b9c39ac5eb" /> | 49 <output name="out_gfa" md5="f82bea6331f62e86cce543c36fb4c1f6" /> |
| 50 </test> | 50 </test> |
| 51 <test> | 51 <test> |
| 52 <param name="seqs" value="A-3105.fa.gz" /> | 52 <param name="seqs" value="A-3105.fa.gz" /> |
| 53 <param name="paf_alns" value="A-3105.paf.gz" /> | 53 <param name="paf_alns" value="A-3105.paf.gz" /> |
| 54 <param name="r" value="3000" /> | 54 <param name="r" value="3000" /> |
| 55 <param name="k" value="1" /> | 55 <param name="k" value="1" /> |
| 56 <param name="B" value="1000000" /> | 56 <param name="B" value="1000000" /> |
| 57 <output name="out_gfa" md5="176f9b4be76a2e69550da9b9c39ac5eb" /> | 57 <output name="out_gfa" md5="f82bea6331f62e86cce543c36fb4c1f6" /> |
| 58 </test> | 58 </test> |
| 59 </tests> | 59 </tests> |
| 60 <help><![CDATA[ | 60 <help><![CDATA[ |
| 61 These **seq**uences **wish** they were squished into a graph. | 61 These **seq**uences **wish** they were squished into a graph. |
| 62 | 62 |