Mercurial > repos > iuc > sinto_barcode
changeset 3:fb61eb03e313 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sinto commit 4a156b17a386e1ecf13dfb2b232a1fc7d8344adc
| author | iuc |
|---|---|
| date | Tue, 05 Nov 2024 11:51:48 +0000 |
| parents | d0f56ac6bb60 |
| children | |
| files | macros.xml sinto_barcode.xml |
| diffstat | 2 files changed, 8 insertions(+), 3 deletions(-) [+] |
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--- a/macros.xml Sat Sep 28 16:34:26 2024 +0000 +++ b/macros.xml Tue Nov 05 11:51:48 2024 +0000 @@ -2,7 +2,11 @@ <macros> <token name="@TOOL_VERSION@">0.10.1</token> <token name="@VERSION_SUFFIX@">0</token> - + <xml name="bio_tools"> + <xrefs> + <xref type="bio.tools">sinto</xref> + </xrefs> + </xml> <xml name="citations"> <citations> <citation type="doi">10.1038/s41592-021-01282-5</citation>
--- a/sinto_barcode.xml Sat Sep 28 16:34:26 2024 +0000 +++ b/sinto_barcode.xml Tue Nov 05 11:51:48 2024 +0000 @@ -3,6 +3,7 @@ <macros> <import>macros.xml</import> </macros> + <expand macro="bio_tools"/> <requirements> <requirement type="package" version="@TOOL_VERSION@">sinto</requirement> </requirements> @@ -13,8 +14,8 @@ #if str( $fastq_input.fastq_input_selector ) == "paired": ln -s '${fastq_input.read2_fastq}' read2.fastq.gz && #end if - sinto barcode - --barcode_fastq barcodes.fastq.gz + sinto barcode + --barcode_fastq barcodes.fastq.gz --read1 read1.fastq.gz #if str( $fastq_input.fastq_input_selector ) == "paired": --read2 read2.fastq.gz