# HG changeset patch
# User iuc
# Date 1689372442 0
# Node ID 029d90b0c4f67b7786fe61d249cad3cf29d52d69
# Parent f079716f598ce30fdc9f54e82405b3dfca633735
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/smallgenomeutilities commit e702dcdbc7c3235ef3c4ee8998c7247d1af49465
diff -r f079716f598c -r 029d90b0c4f6 annotations_NC_045512.2.gff3
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/annotations_NC_045512.2.gff3 Fri Jul 14 22:07:22 2023 +0000
@@ -0,0 +1,36 @@
+##gff-version 3
+#!gff-spec-version 1.21
+#!processor NCBI annotwriter
+##sequence-region NC_045512.2 1 29903
+NC_045512.2 RefSeq five_prime_UTR 1 265 . + . ID=id-NC_045512.2:1..265;gbkey=5'UTR
+NC_045512.2 RefSeq gene 266 21555 . + . ID=gene-GU280_gp01;Dbxref=GeneID:43740578;Name=ORF1ab;gbkey=Gene;gene=ORF1ab;gene_biotype=protein_coding;locus_tag=GU280_gp01
+NC_045512.2 RefSeq CDS 266 13468 . + 1 ID=cds-YP_009724389.1;Parent=gene-GU280_gp01;Dbxref=Genbank:YP_009724389.1,GeneID:43740578;Name=YP_009724389.1;Note=pp1ab%3B translated by -1 ribosomal frameshift;exception=ribosomal slippage;gbkey=CDS;gene=ORF1ab;locus_tag=GU280_gp01;product=ORF1ab polyprotein;protein_id=YP_009724389.1
+NC_045512.2 RefSeq CDS 13468 21555 . + 1 ID=cds-YP_009724389.1;Parent=gene-GU280_gp01;Dbxref=Genbank:YP_009724389.1,GeneID:43740578;Name=YP_009724389.1;Note=pp1ab%3B translated by -1 ribosomal frameshift;exception=ribosomal slippage;gbkey=CDS;gene=ORF1ab;locus_tag=GU280_gp01;product=ORF1ab polyprotein;protein_id=YP_009724389.1
+NC_045512.2 RefSeq CDS 266 13483 . + 1 ID=cds-YP_009725295.1;Parent=gene-GU280_gp01;Dbxref=Genbank:YP_009725295.1,GeneID:43740578;Name=YP_009725295.1;Note=pp1a;gbkey=CDS;gene=ORF1ab;locus_tag=GU280_gp01;product=ORF1a polyprotein;protein_id=YP_009725295.1
+NC_045512.2 RefSeq stem_loop 13476 13503 . + . ID=id-GU280_gp01;Dbxref=GeneID:43740578;function=Coronavirus frameshifting stimulation element stem-loop 1;gbkey=stem_loop;gene=ORF1ab;inference=COORDINATES: profile:Rfam-release-14.1:RF00507%2CInfernal:1.1.2;locus_tag=GU280_gp01
+NC_045512.2 RefSeq stem_loop 13488 13542 . + . ID=id-GU280_gp01-2;Dbxref=GeneID:43740578;function=Coronavirus frameshifting stimulation element stem-loop 2;gbkey=stem_loop;gene=ORF1ab;inference=COORDINATES: profile:profile:Rfam-release-14.1:RF00507%2CInfernal:1.1.2;locus_tag=GU280_gp01
+NC_045512.2 RefSeq gene 21563 25384 . + . ID=gene-GU280_gp02;Dbxref=GeneID:43740568;Name=S;gbkey=Gene;gene=S;gene_biotype=protein_coding;gene_synonym=spike glycoprotein;locus_tag=GU280_gp02
+NC_045512.2 RefSeq CDS 21563 25384 . + 1 ID=cds-YP_009724390.1;Parent=gene-GU280_gp02;Dbxref=Genbank:YP_009724390.1,GeneID:43740568;Name=YP_009724390.1;Note=structural protein%3B spike protein;gbkey=CDS;gene=S;locus_tag=GU280_gp02;product=surface glycoprotein;protein_id=YP_009724390.1
+NC_045512.2 RefSeq gene 25393 26220 . + . ID=gene-GU280_gp03;Dbxref=GeneID:43740569;Name=ORF3a;gbkey=Gene;gene=ORF3a;gene_biotype=protein_coding;locus_tag=GU280_gp03
+NC_045512.2 RefSeq CDS 25393 26220 . + 1 ID=cds-YP_009724391.1;Parent=gene-GU280_gp03;Dbxref=Genbank:YP_009724391.1,GeneID:43740569;Name=YP_009724391.1;gbkey=CDS;gene=ORF3a;locus_tag=GU280_gp03;product=ORF3a protein;protein_id=YP_009724391.1
+NC_045512.2 RefSeq gene 26245 26472 . + . ID=gene-GU280_gp04;Dbxref=GeneID:43740570;Name=E;gbkey=Gene;gene=E;gene_biotype=protein_coding;locus_tag=GU280_gp04
+NC_045512.2 RefSeq CDS 26245 26472 . + 1 ID=cds-YP_009724392.1;Parent=gene-GU280_gp04;Dbxref=Genbank:YP_009724392.1,GeneID:43740570;Name=YP_009724392.1;Note=ORF4%3B structural protein%3B E protein;gbkey=CDS;gene=E;locus_tag=GU280_gp04;product=envelope protein;protein_id=YP_009724392.1
+NC_045512.2 RefSeq gene 26523 27191 . + . ID=gene-GU280_gp05;Dbxref=GeneID:43740571;Name=M;gbkey=Gene;gene=M;gene_biotype=protein_coding;locus_tag=GU280_gp05
+NC_045512.2 RefSeq CDS 26523 27191 . + 1 ID=cds-YP_009724393.1;Parent=gene-GU280_gp05;Dbxref=Genbank:YP_009724393.1,GeneID:43740571;Name=YP_009724393.1;Note=ORF5%3B structural protein;gbkey=CDS;gene=M;locus_tag=GU280_gp05;product=membrane glycoprotein;protein_id=YP_009724393.1
+NC_045512.2 RefSeq gene 27202 27387 . + . ID=gene-GU280_gp06;Dbxref=GeneID:43740572;Name=ORF6;gbkey=Gene;gene=ORF6;gene_biotype=protein_coding;locus_tag=GU280_gp06
+NC_045512.2 RefSeq CDS 27202 27387 . + 1 ID=cds-YP_009724394.1;Parent=gene-GU280_gp06;Dbxref=Genbank:YP_009724394.1,GeneID:43740572;Name=YP_009724394.1;gbkey=CDS;gene=ORF6;locus_tag=GU280_gp06;product=ORF6 protein;protein_id=YP_009724394.1
+NC_045512.2 RefSeq gene 27394 27759 . + . ID=gene-GU280_gp07;Dbxref=GeneID:43740573;Name=ORF7a;gbkey=Gene;gene=ORF7a;gene_biotype=protein_coding;locus_tag=GU280_gp07
+NC_045512.2 RefSeq CDS 27394 27759 . + 1 ID=cds-YP_009724395.1;Parent=gene-GU280_gp07;Dbxref=Genbank:YP_009724395.1,GeneID:43740573;Name=YP_009724395.1;gbkey=CDS;gene=ORF7a;locus_tag=GU280_gp07;product=ORF7a protein;protein_id=YP_009724395.1
+NC_045512.2 RefSeq gene 27756 27887 . + . ID=gene-GU280_gp08;Dbxref=GeneID:43740574;Name=ORF7b;gbkey=Gene;gene=ORF7b;gene_biotype=protein_coding;locus_tag=GU280_gp08
+NC_045512.2 RefSeq CDS 27756 27887 . + 1 ID=cds-YP_009725318.1;Parent=gene-GU280_gp08;Dbxref=Genbank:YP_009725318.1,GeneID:43740574;Name=YP_009725318.1;gbkey=CDS;gene=ORF7b;locus_tag=GU280_gp08;product=ORF7b;protein_id=YP_009725318.1
+NC_045512.2 RefSeq gene 27894 28259 . + . ID=gene-GU280_gp09;Dbxref=GeneID:43740577;Name=ORF8;gbkey=Gene;gene=ORF8;gene_biotype=protein_coding;locus_tag=GU280_gp09
+NC_045512.2 RefSeq CDS 27894 28259 . + 1 ID=cds-YP_009724396.1;Parent=gene-GU280_gp09;Dbxref=Genbank:YP_009724396.1,GeneID:43740577;Name=YP_009724396.1;gbkey=CDS;gene=ORF8;locus_tag=GU280_gp09;product=ORF8 protein;protein_id=YP_009724396.1
+NC_045512.2 RefSeq gene 28274 29533 . + . ID=gene-GU280_gp10;Dbxref=GeneID:43740575;Name=N;gbkey=Gene;gene=N;gene_biotype=protein_coding;locus_tag=GU280_gp10
+NC_045512.2 RefSeq CDS 28274 29533 . + 1 ID=cds-YP_009724397.2;Parent=gene-GU280_gp10;Dbxref=Genbank:YP_009724397.2,GeneID:43740575;Name=YP_009724397.2;Note=ORF9%3B structural protein;gbkey=CDS;gene=N;locus_tag=GU280_gp10;product=nucleocapsid phosphoprotein;protein_id=YP_009724397.2
+NC_045512.2 RefSeq gene 29558 29674 . + . ID=gene-GU280_gp11;Dbxref=GeneID:43740576;Name=ORF10;gbkey=Gene;gene=ORF10;gene_biotype=protein_coding;locus_tag=GU280_gp11
+NC_045512.2 RefSeq CDS 29558 29674 . + 1 ID=cds-YP_009725255.1;Parent=gene-GU280_gp11;Dbxref=Genbank:YP_009725255.1,GeneID:43740576;Name=YP_009725255.1;gbkey=CDS;gene=ORF10;locus_tag=GU280_gp11;product=ORF10 protein;protein_id=YP_009725255.1
+NC_045512.2 RefSeq stem_loop 29609 29644 . + . ID=id-GU280_gp11;Dbxref=GeneID:43740576;function=Coronavirus 3' UTR pseudoknot stem-loop 1;gbkey=stem_loop;gene=ORF10;inference=COORDINATES: profile::Rfam-release-14.1:RF00165%2CInfernal:1.1.2;locus_tag=GU280_gp11
+NC_045512.2 RefSeq stem_loop 29629 29657 . + . ID=id-GU280_gp11-2;Dbxref=GeneID:43740576;function=Coronavirus 3' UTR pseudoknot stem-loop 2;gbkey=stem_loop;gene=ORF10;inference=COORDINATES: profile::Rfam-release-14.1:RF00165%2CInfernal:1.1.2;locus_tag=GU280_gp11
+NC_045512.2 RefSeq three_prime_UTR 29675 29903 . + . ID=id-NC_045512.2:29675..29903;gbkey=3'UTR
+NC_045512.2 RefSeq stem_loop 29728 29768 . + . ID=id-NC_045512.2:29728..29768;Note=basepair exception: alignment to the Rfam model implies coordinates 29740:29758 form a noncanonical C:T basepair%2C but the homologous positions form a highly conserved C:G basepair in other viruses%2C including SARS (NC_004718.3);function=Coronavirus 3' stem-loop II-like motif (s2m);gbkey=stem_loop;inference=COORDINATES: profile:Rfam-release-14.1:RF00164%2CInfernal:1.1.2
+###
diff -r f079716f598c -r 029d90b0c4f6 frameshift_deletions_checks.xml
--- a/frameshift_deletions_checks.xml Wed May 31 17:10:11 2023 +0000
+++ b/frameshift_deletions_checks.xml Fri Jul 14 22:07:22 2023 +0000
@@ -11,52 +11,104 @@
&2 &&
- ln -vs '$input' 'input.${input.ext}' >&2 &&
- ln -vs '$input.metadata.cram_index' 'input.${input.ext}.crai' >&2 &&
+ln -s '$input' input.cram &&
+ln -s '$input.metadata.cram_index' input.cram.crai &&
#elif $input.is_of_type("bam"):
- echo 'is BAM' &&
- ln -s '$input' 'input.${input.ext}' >&2 &&
- ln -s '$input.metadata.bam_index' 'input.${input.ext}.bai' >&2 &&
+ln -s '$input' input.bam &&
+ln -s '$input.metadata.bam_index' input.bam.bai &&
#else:
# raise TypeError('Unknown input alignment type ${input.ext}')
#end if
-ln -vs '$consensus' 'consensus.${consensus.ext}' >&2 &&
-ln -vs '$reference' 'reference.${reference.ext}' >&2 &&
+ln -s '$consensus' consensus.fasta &&
+#if str($ref_data.choice) == 'custom':
+ln -s '$reference' reference.fa &&
+#else:
+ln -s '$__tool_directory__/ref_NC_045512.2.fasta' reference.fa &&
+#end if
frameshift_deletions_checks
- --input='input.${input.ext}'
- --consensus='consensus.${consensus.ext}'
- --reference='reference.${reference.ext}'
- --genes='$genes'
- --output='$report'
-#if $orf1ab != '':
- --orf1ab='$orf1ab'
+ --input=input.${input.ext}
+ --consensus=consensus.fasta
+ --reference=reference.fa
+#if str($ref_data.choice) == 'standard':
+ --genes='$__tool_directory__'/annotations_NC_045512.2.gff3
+ --orf1ab='cds-YP_009724389.1'
+#else:
+ --genes='$ref_data.genes'
+ --orf1ab='$ref_data.orf1ab'
#end if
- '$english'
- $zero_based
+ $out_options.english
+ $out_options.zero_based
+ --output=report.tsv &&
+python '$__tool_directory__/frameshift_deletions_report_fixer.py' report.tsv '$report'
]]>
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@@ -71,8 +123,8 @@
* *gene_region*: Gene in which the deletion is found according to ``--genes`` argument;
* *reads_all*: Total number of reads covering the indel;
-* *reads_fwd*: Total nubmer of forward reads covering the indel;
-* *reads_rev*: Total nubmer of reverse reads covering the indel;
+* *reads_fwd*: Total number of forward reads covering the indel;
+* *reads_rev*: Total number of reverse reads covering the indel;
* *deletions/insertions*: Number of reads supporting the deletion/insertion;
* *freq_del/freq_insert*: Fraction of reads supporting the deletion/insertion;
* *matches_ref*: number of reads that matche with the reference base;
diff -r f079716f598c -r 029d90b0c4f6 frameshift_deletions_report_fixer.py
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/frameshift_deletions_report_fixer.py Fri Jul 14 22:07:22 2023 +0000
@@ -0,0 +1,35 @@
+"""Polish the output of the frameshift_deletions_check command.
+
+- Drops the first index column, which is rather pointless to include
+- Turns ref bases printed as literal bytes strings into plain output
+- Removes [] around pos lists and spaces after comma separating list elements
+- Turns None and empty list values into . as a cell placeholder
+"""
+
+import re
+import sys
+
+
+def matchrepl(matchobj):
+ bytes_string_content = matchobj.group(1)
+ if bytes_string_content is not None:
+ return bytes_string_content
+ list_content = matchobj.group(2)
+ if list_content is not None:
+ if list_content == '':
+ return '.'
+ return list_content.replace(', ', ',')
+ none_cell = matchobj.group(3)
+ if none_cell is not None:
+ return '\t.\t'
+
+ raise ValueError('Error in regex parsing code')
+
+
+if __name__ == '__main__':
+ regex = re.compile(r"b'(.+)'|\[([^\]]*)\]|\t(None)\t")
+ with open(sys.argv[1]) as i:
+ with open(sys.argv[2], 'w') as o:
+ for line in i:
+ line = line[line.index('\t') + 1:]
+ o.write(regex.sub(matchrepl, line))
diff -r f079716f598c -r 029d90b0c4f6 macros.xml
--- a/macros.xml Wed May 31 17:10:11 2023 +0000
+++ b/macros.xml Fri Jul 14 22:07:22 2023 +0000
@@ -1,6 +1,6 @@
0.3.9
- 0
+ 1
21.09
diff -r f079716f598c -r 029d90b0c4f6 ref_NC_045512.2.fasta
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/ref_NC_045512.2.fasta Fri Jul 14 22:07:22 2023 +0000
@@ -0,0 +1,430 @@
+>NC_045512.2 Wuhan seafood market pneumonia virus isolate Wuhan-Hu-1, complete genome
+ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAA
+CGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAAC
+TAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTG
+TTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTC
+CCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTAC
+GTGGCTTTGGAGACTCCGTGGAGGAGGTCTTATCAGAGGCACGTCAACATCTTAAAGATGGCACTTGTGG
+CTTAGTAGAAGTTGAAAAAGGCGTTTTGCCTCAACTTGAACAGCCCTATGTGTTCATCAAACGTTCGGAT
+GCTCGAACTGCACCTCATGGTCATGTTATGGTTGAGCTGGTAGCAGAACTCGAAGGCATTCAGTACGGTC
+GTAGTGGTGAGACACTTGGTGTCCTTGTCCCTCATGTGGGCGAAATACCAGTGGCTTACCGCAAGGTTCT
+TCTTCGTAAGAACGGTAATAAAGGAGCTGGTGGCCATAGTTACGGCGCCGATCTAAAGTCATTTGACTTA
+GGCGACGAGCTTGGCACTGATCCTTATGAAGATTTTCAAGAAAACTGGAACACTAAACATAGCAGTGGTG
+TTACCCGTGAACTCATGCGTGAGCTTAACGGAGGGGCATACACTCGCTATGTCGATAACAACTTCTGTGG
+CCCTGATGGCTACCCTCTTGAGTGCATTAAAGACCTTCTAGCACGTGCTGGTAAAGCTTCATGCACTTTG
+TCCGAACAACTGGACTTTATTGACACTAAGAGGGGTGTATACTGCTGCCGTGAACATGAGCATGAAATTG
+CTTGGTACACGGAACGTTCTGAAAAGAGCTATGAATTGCAGACACCTTTTGAAATTAAATTGGCAAAGAA
+ATTTGACACCTTCAATGGGGAATGTCCAAATTTTGTATTTCCCTTAAATTCCATAATCAAGACTATTCAA
+CCAAGGGTTGAAAAGAAAAAGCTTGATGGCTTTATGGGTAGAATTCGATCTGTCTATCCAGTTGCGTCAC
+CAAATGAATGCAACCAAATGTGCCTTTCAACTCTCATGAAGTGTGATCATTGTGGTGAAACTTCATGGCA
+GACGGGCGATTTTGTTAAAGCCACTTGCGAATTTTGTGGCACTGAGAATTTGACTAAAGAAGGTGCCACT
+ACTTGTGGTTACTTACCCCAAAATGCTGTTGTTAAAATTTATTGTCCAGCATGTCACAATTCAGAAGTAG
+GACCTGAGCATAGTCTTGCCGAATACCATAATGAATCTGGCTTGAAAACCATTCTTCGTAAGGGTGGTCG
+CACTATTGCCTTTGGAGGCTGTGTGTTCTCTTATGTTGGTTGCCATAACAAGTGTGCCTATTGGGTTCCA
+CGTGCTAGCGCTAACATAGGTTGTAACCATACAGGTGTTGTTGGAGAAGGTTCCGAAGGTCTTAATGACA
+ACCTTCTTGAAATACTCCAAAAAGAGAAAGTCAACATCAATATTGTTGGTGACTTTAAACTTAATGAAGA
+GATCGCCATTATTTTGGCATCTTTTTCTGCTTCCACAAGTGCTTTTGTGGAAACTGTGAAAGGTTTGGAT
+TATAAAGCATTCAAACAAATTGTTGAATCCTGTGGTAATTTTAAAGTTACAAAAGGAAAAGCTAAAAAAG
+GTGCCTGGAATATTGGTGAACAGAAATCAATACTGAGTCCTCTTTATGCATTTGCATCAGAGGCTGCTCG
+TGTTGTACGATCAATTTTCTCCCGCACTCTTGAAACTGCTCAAAATTCTGTGCGTGTTTTACAGAAGGCC
+GCTATAACAATACTAGATGGAATTTCACAGTATTCACTGAGACTCATTGATGCTATGATGTTCACATCTG
+ATTTGGCTACTAACAATCTAGTTGTAATGGCCTACATTACAGGTGGTGTTGTTCAGTTGACTTCGCAGTG
+GCTAACTAACATCTTTGGCACTGTTTATGAAAAACTCAAACCCGTCCTTGATTGGCTTGAAGAGAAGTTT
+AAGGAAGGTGTAGAGTTTCTTAGAGACGGTTGGGAAATTGTTAAATTTATCTCAACCTGTGCTTGTGAAA
+TTGTCGGTGGACAAATTGTCACCTGTGCAAAGGAAATTAAGGAGAGTGTTCAGACATTCTTTAAGCTTGT
+AAATAAATTTTTGGCTTTGTGTGCTGACTCTATCATTATTGGTGGAGCTAAACTTAAAGCCTTGAATTTA
+GGTGAAACATTTGTCACGCACTCAAAGGGATTGTACAGAAAGTGTGTTAAATCCAGAGAAGAAACTGGCC
+TACTCATGCCTCTAAAAGCCCCAAAAGAAATTATCTTCTTAGAGGGAGAAACACTTCCCACAGAAGTGTT
+AACAGAGGAAGTTGTCTTGAAAACTGGTGATTTACAACCATTAGAACAACCTACTAGTGAAGCTGTTGAA
+GCTCCATTGGTTGGTACACCAGTTTGTATTAACGGGCTTATGTTGCTCGAAATCAAAGACACAGAAAAGT
+ACTGTGCCCTTGCACCTAATATGATGGTAACAAACAATACCTTCACACTCAAAGGCGGTGCACCAACAAA
+GGTTACTTTTGGTGATGACACTGTGATAGAAGTGCAAGGTTACAAGAGTGTGAATATCACTTTTGAACTT
+GATGAAAGGATTGATAAAGTACTTAATGAGAAGTGCTCTGCCTATACAGTTGAACTCGGTACAGAAGTAA
+ATGAGTTCGCCTGTGTTGTGGCAGATGCTGTCATAAAAACTTTGCAACCAGTATCTGAATTACTTACACC
+ACTGGGCATTGATTTAGATGAGTGGAGTATGGCTACATACTACTTATTTGATGAGTCTGGTGAGTTTAAA
+TTGGCTTCACATATGTATTGTTCTTTCTACCCTCCAGATGAGGATGAAGAAGAAGGTGATTGTGAAGAAG
+AAGAGTTTGAGCCATCAACTCAATATGAGTATGGTACTGAAGATGATTACCAAGGTAAACCTTTGGAATT
+TGGTGCCACTTCTGCTGCTCTTCAACCTGAAGAAGAGCAAGAAGAAGATTGGTTAGATGATGATAGTCAA
+CAAACTGTTGGTCAACAAGACGGCAGTGAGGACAATCAGACAACTACTATTCAAACAATTGTTGAGGTTC
+AACCTCAATTAGAGATGGAACTTACACCAGTTGTTCAGACTATTGAAGTGAATAGTTTTAGTGGTTATTT
+AAAACTTACTGACAATGTATACATTAAAAATGCAGACATTGTGGAAGAAGCTAAAAAGGTAAAACCAACA
+GTGGTTGTTAATGCAGCCAATGTTTACCTTAAACATGGAGGAGGTGTTGCAGGAGCCTTAAATAAGGCTA
+CTAACAATGCCATGCAAGTTGAATCTGATGATTACATAGCTACTAATGGACCACTTAAAGTGGGTGGTAG
+TTGTGTTTTAAGCGGACACAATCTTGCTAAACACTGTCTTCATGTTGTCGGCCCAAATGTTAACAAAGGT
+GAAGACATTCAACTTCTTAAGAGTGCTTATGAAAATTTTAATCAGCACGAAGTTCTACTTGCACCATTAT
+TATCAGCTGGTATTTTTGGTGCTGACCCTATACATTCTTTAAGAGTTTGTGTAGATACTGTTCGCACAAA
+TGTCTACTTAGCTGTCTTTGATAAAAATCTCTATGACAAACTTGTTTCAAGCTTTTTGGAAATGAAGAGT
+GAAAAGCAAGTTGAACAAAAGATCGCTGAGATTCCTAAAGAGGAAGTTAAGCCATTTATAACTGAAAGTA
+AACCTTCAGTTGAACAGAGAAAACAAGATGATAAGAAAATCAAAGCTTGTGTTGAAGAAGTTACAACAAC
+TCTGGAAGAAACTAAGTTCCTCACAGAAAACTTGTTACTTTATATTGACATTAATGGCAATCTTCATCCA
+GATTCTGCCACTCTTGTTAGTGACATTGACATCACTTTCTTAAAGAAAGATGCTCCATATATAGTGGGTG
+ATGTTGTTCAAGAGGGTGTTTTAACTGCTGTGGTTATACCTACTAAAAAGGCTGGTGGCACTACTGAAAT
+GCTAGCGAAAGCTTTGAGAAAAGTGCCAACAGACAATTATATAACCACTTACCCGGGTCAGGGTTTAAAT
+GGTTACACTGTAGAGGAGGCAAAGACAGTGCTTAAAAAGTGTAAAAGTGCCTTTTACATTCTACCATCTA
+TTATCTCTAATGAGAAGCAAGAAATTCTTGGAACTGTTTCTTGGAATTTGCGAGAAATGCTTGCACATGC
+AGAAGAAACACGCAAATTAATGCCTGTCTGTGTGGAAACTAAAGCCATAGTTTCAACTATACAGCGTAAA
+TATAAGGGTATTAAAATACAAGAGGGTGTGGTTGATTATGGTGCTAGATTTTACTTTTACACCAGTAAAA
+CAACTGTAGCGTCACTTATCAACACACTTAACGATCTAAATGAAACTCTTGTTACAATGCCACTTGGCTA
+TGTAACACATGGCTTAAATTTGGAAGAAGCTGCTCGGTATATGAGATCTCTCAAAGTGCCAGCTACAGTT
+TCTGTTTCTTCACCTGATGCTGTTACAGCGTATAATGGTTATCTTACTTCTTCTTCTAAAACACCTGAAG
+AACATTTTATTGAAACCATCTCACTTGCTGGTTCCTATAAAGATTGGTCCTATTCTGGACAATCTACACA
+ACTAGGTATAGAATTTCTTAAGAGAGGTGATAAAAGTGTATATTACACTAGTAATCCTACCACATTCCAC
+CTAGATGGTGAAGTTATCACCTTTGACAATCTTAAGACACTTCTTTCTTTGAGAGAAGTGAGGACTATTA
+AGGTGTTTACAACAGTAGACAACATTAACCTCCACACGCAAGTTGTGGACATGTCAATGACATATGGACA
+ACAGTTTGGTCCAACTTATTTGGATGGAGCTGATGTTACTAAAATAAAACCTCATAATTCACATGAAGGT
+AAAACATTTTATGTTTTACCTAATGATGACACTCTACGTGTTGAGGCTTTTGAGTACTACCACACAACTG
+ATCCTAGTTTTCTGGGTAGGTACATGTCAGCATTAAATCACACTAAAAAGTGGAAATACCCACAAGTTAA
+TGGTTTAACTTCTATTAAATGGGCAGATAACAACTGTTATCTTGCCACTGCATTGTTAACACTCCAACAA
+ATAGAGTTGAAGTTTAATCCACCTGCTCTACAAGATGCTTATTACAGAGCAAGGGCTGGTGAAGCTGCTA
+ACTTTTGTGCACTTATCTTAGCCTACTGTAATAAGACAGTAGGTGAGTTAGGTGATGTTAGAGAAACAAT
+GAGTTACTTGTTTCAACATGCCAATTTAGATTCTTGCAAAAGAGTCTTGAACGTGGTGTGTAAAACTTGT
+GGACAACAGCAGACAACCCTTAAGGGTGTAGAAGCTGTTATGTACATGGGCACACTTTCTTATGAACAAT
+TTAAGAAAGGTGTTCAGATACCTTGTACGTGTGGTAAACAAGCTACAAAATATCTAGTACAACAGGAGTC
+ACCTTTTGTTATGATGTCAGCACCACCTGCTCAGTATGAACTTAAGCATGGTACATTTACTTGTGCTAGT
+GAGTACACTGGTAATTACCAGTGTGGTCACTATAAACATATAACTTCTAAAGAAACTTTGTATTGCATAG
+ACGGTGCTTTACTTACAAAGTCCTCAGAATACAAAGGTCCTATTACGGATGTTTTCTACAAAGAAAACAG
+TTACACAACAACCATAAAACCAGTTACTTATAAATTGGATGGTGTTGTTTGTACAGAAATTGACCCTAAG
+TTGGACAATTATTATAAGAAAGACAATTCTTATTTCACAGAGCAACCAATTGATCTTGTACCAAACCAAC
+CATATCCAAACGCAAGCTTCGATAATTTTAAGTTTGTATGTGATAATATCAAATTTGCTGATGATTTAAA
+CCAGTTAACTGGTTATAAGAAACCTGCTTCAAGAGAGCTTAAAGTTACATTTTTCCCTGACTTAAATGGT
+GATGTGGTGGCTATTGATTATAAACACTACACACCCTCTTTTAAGAAAGGAGCTAAATTGTTACATAAAC
+CTATTGTTTGGCATGTTAACAATGCAACTAATAAAGCCACGTATAAACCAAATACCTGGTGTATACGTTG
+TCTTTGGAGCACAAAACCAGTTGAAACATCAAATTCGTTTGATGTACTGAAGTCAGAGGACGCGCAGGGA
+ATGGATAATCTTGCCTGCGAAGATCTAAAACCAGTCTCTGAAGAAGTAGTGGAAAATCCTACCATACAGA
+AAGACGTTCTTGAGTGTAATGTGAAAACTACCGAAGTTGTAGGAGACATTATACTTAAACCAGCAAATAA
+TAGTTTAAAAATTACAGAAGAGGTTGGCCACACAGATCTAATGGCTGCTTATGTAGACAATTCTAGTCTT
+ACTATTAAGAAACCTAATGAATTATCTAGAGTATTAGGTTTGAAAACCCTTGCTACTCATGGTTTAGCTG
+CTGTTAATAGTGTCCCTTGGGATACTATAGCTAATTATGCTAAGCCTTTTCTTAACAAAGTTGTTAGTAC
+AACTACTAACATAGTTACACGGTGTTTAAACCGTGTTTGTACTAATTATATGCCTTATTTCTTTACTTTA
+TTGCTACAATTGTGTACTTTTACTAGAAGTACAAATTCTAGAATTAAAGCATCTATGCCGACTACTATAG
+CAAAGAATACTGTTAAGAGTGTCGGTAAATTTTGTCTAGAGGCTTCATTTAATTATTTGAAGTCACCTAA
+TTTTTCTAAACTGATAAATATTATAATTTGGTTTTTACTATTAAGTGTTTGCCTAGGTTCTTTAATCTAC
+TCAACCGCTGCTTTAGGTGTTTTAATGTCTAATTTAGGCATGCCTTCTTACTGTACTGGTTACAGAGAAG
+GCTATTTGAACTCTACTAATGTCACTATTGCAACCTACTGTACTGGTTCTATACCTTGTAGTGTTTGTCT
+TAGTGGTTTAGATTCTTTAGACACCTATCCTTCTTTAGAAACTATACAAATTACCATTTCATCTTTTAAA
+TGGGATTTAACTGCTTTTGGCTTAGTTGCAGAGTGGTTTTTGGCATATATTCTTTTCACTAGGTTTTTCT
+ATGTACTTGGATTGGCTGCAATCATGCAATTGTTTTTCAGCTATTTTGCAGTACATTTTATTAGTAATTC
+TTGGCTTATGTGGTTAATAATTAATCTTGTACAAATGGCCCCGATTTCAGCTATGGTTAGAATGTACATC
+TTCTTTGCATCATTTTATTATGTATGGAAAAGTTATGTGCATGTTGTAGACGGTTGTAATTCATCAACTT
+GTATGATGTGTTACAAACGTAATAGAGCAACAAGAGTCGAATGTACAACTATTGTTAATGGTGTTAGAAG
+GTCCTTTTATGTCTATGCTAATGGAGGTAAAGGCTTTTGCAAACTACACAATTGGAATTGTGTTAATTGT
+GATACATTCTGTGCTGGTAGTACATTTATTAGTGATGAAGTTGCGAGAGACTTGTCACTACAGTTTAAAA
+GACCAATAAATCCTACTGACCAGTCTTCTTACATCGTTGATAGTGTTACAGTGAAGAATGGTTCCATCCA
+TCTTTACTTTGATAAAGCTGGTCAAAAGACTTATGAAAGACATTCTCTCTCTCATTTTGTTAACTTAGAC
+AACCTGAGAGCTAATAACACTAAAGGTTCATTGCCTATTAATGTTATAGTTTTTGATGGTAAATCAAAAT
+GTGAAGAATCATCTGCAAAATCAGCGTCTGTTTACTACAGTCAGCTTATGTGTCAACCTATACTGTTACT
+AGATCAGGCATTAGTGTCTGATGTTGGTGATAGTGCGGAAGTTGCAGTTAAAATGTTTGATGCTTACGTT
+AATACGTTTTCATCAACTTTTAACGTACCAATGGAAAAACTCAAAACACTAGTTGCAACTGCAGAAGCTG
+AACTTGCAAAGAATGTGTCCTTAGACAATGTCTTATCTACTTTTATTTCAGCAGCTCGGCAAGGGTTTGT
+TGATTCAGATGTAGAAACTAAAGATGTTGTTGAATGTCTTAAATTGTCACATCAATCTGACATAGAAGTT
+ACTGGCGATAGTTGTAATAACTATATGCTCACCTATAACAAAGTTGAAAACATGACACCCCGTGACCTTG
+GTGCTTGTATTGACTGTAGTGCGCGTCATATTAATGCGCAGGTAGCAAAAAGTCACAACATTGCTTTGAT
+ATGGAACGTTAAAGATTTCATGTCATTGTCTGAACAACTACGAAAACAAATACGTAGTGCTGCTAAAAAG
+AATAACTTACCTTTTAAGTTGACATGTGCAACTACTAGACAAGTTGTTAATGTTGTAACAACAAAGATAG
+CACTTAAGGGTGGTAAAATTGTTAATAATTGGTTGAAGCAGTTAATTAAAGTTACACTTGTGTTCCTTTT
+TGTTGCTGCTATTTTCTATTTAATAACACCTGTTCATGTCATGTCTAAACATACTGACTTTTCAAGTGAA
+ATCATAGGATACAAGGCTATTGATGGTGGTGTCACTCGTGACATAGCATCTACAGATACTTGTTTTGCTA
+ACAAACATGCTGATTTTGACACATGGTTTAGCCAGCGTGGTGGTAGTTATACTAATGACAAAGCTTGCCC
+ATTGATTGCTGCAGTCATAACAAGAGAAGTGGGTTTTGTCGTGCCTGGTTTGCCTGGCACGATATTACGC
+ACAACTAATGGTGACTTTTTGCATTTCTTACCTAGAGTTTTTAGTGCAGTTGGTAACATCTGTTACACAC
+CATCAAAACTTATAGAGTACACTGACTTTGCAACATCAGCTTGTGTTTTGGCTGCTGAATGTACAATTTT
+TAAAGATGCTTCTGGTAAGCCAGTACCATATTGTTATGATACCAATGTACTAGAAGGTTCTGTTGCTTAT
+GAAAGTTTACGCCCTGACACACGTTATGTGCTCATGGATGGCTCTATTATTCAATTTCCTAACACCTACC
+TTGAAGGTTCTGTTAGAGTGGTAACAACTTTTGATTCTGAGTACTGTAGGCACGGCACTTGTGAAAGATC
+AGAAGCTGGTGTTTGTGTATCTACTAGTGGTAGATGGGTACTTAACAATGATTATTACAGATCTTTACCA
+GGAGTTTTCTGTGGTGTAGATGCTGTAAATTTACTTACTAATATGTTTACACCACTAATTCAACCTATTG
+GTGCTTTGGACATATCAGCATCTATAGTAGCTGGTGGTATTGTAGCTATCGTAGTAACATGCCTTGCCTA
+CTATTTTATGAGGTTTAGAAGAGCTTTTGGTGAATACAGTCATGTAGTTGCCTTTAATACTTTACTATTC
+CTTATGTCATTCACTGTACTCTGTTTAACACCAGTTTACTCATTCTTACCTGGTGTTTATTCTGTTATTT
+ACTTGTACTTGACATTTTATCTTACTAATGATGTTTCTTTTTTAGCACATATTCAGTGGATGGTTATGTT
+CACACCTTTAGTACCTTTCTGGATAACAATTGCTTATATCATTTGTATTTCCACAAAGCATTTCTATTGG
+TTCTTTAGTAATTACCTAAAGAGACGTGTAGTCTTTAATGGTGTTTCCTTTAGTACTTTTGAAGAAGCTG
+CGCTGTGCACCTTTTTGTTAAATAAAGAAATGTATCTAAAGTTGCGTAGTGATGTGCTATTACCTCTTAC
+GCAATATAATAGATACTTAGCTCTTTATAATAAGTACAAGTATTTTAGTGGAGCAATGGATACAACTAGC
+TACAGAGAAGCTGCTTGTTGTCATCTCGCAAAGGCTCTCAATGACTTCAGTAACTCAGGTTCTGATGTTC
+TTTACCAACCACCACAAACCTCTATCACCTCAGCTGTTTTGCAGAGTGGTTTTAGAAAAATGGCATTCCC
+ATCTGGTAAAGTTGAGGGTTGTATGGTACAAGTAACTTGTGGTACAACTACACTTAACGGTCTTTGGCTT
+GATGACGTAGTTTACTGTCCAAGACATGTGATCTGCACCTCTGAAGACATGCTTAACCCTAATTATGAAG
+ATTTACTCATTCGTAAGTCTAATCATAATTTCTTGGTACAGGCTGGTAATGTTCAACTCAGGGTTATTGG
+ACATTCTATGCAAAATTGTGTACTTAAGCTTAAGGTTGATACAGCCAATCCTAAGACACCTAAGTATAAG
+TTTGTTCGCATTCAACCAGGACAGACTTTTTCAGTGTTAGCTTGTTACAATGGTTCACCATCTGGTGTTT
+ACCAATGTGCTATGAGGCCCAATTTCACTATTAAGGGTTCATTCCTTAATGGTTCATGTGGTAGTGTTGG
+TTTTAACATAGATTATGACTGTGTCTCTTTTTGTTACATGCACCATATGGAATTACCAACTGGAGTTCAT
+GCTGGCACAGACTTAGAAGGTAACTTTTATGGACCTTTTGTTGACAGGCAAACAGCACAAGCAGCTGGTA
+CGGACACAACTATTACAGTTAATGTTTTAGCTTGGTTGTACGCTGCTGTTATAAATGGAGACAGGTGGTT
+TCTCAATCGATTTACCACAACTCTTAATGACTTTAACCTTGTGGCTATGAAGTACAATTATGAACCTCTA
+ACACAAGACCATGTTGACATACTAGGACCTCTTTCTGCTCAAACTGGAATTGCCGTTTTAGATATGTGTG
+CTTCATTAAAAGAATTACTGCAAAATGGTATGAATGGACGTACCATATTGGGTAGTGCTTTATTAGAAGA
+TGAATTTACACCTTTTGATGTTGTTAGACAATGCTCAGGTGTTACTTTCCAAAGTGCAGTGAAAAGAACA
+ATCAAGGGTACACACCACTGGTTGTTACTCACAATTTTGACTTCACTTTTAGTTTTAGTCCAGAGTACTC
+AATGGTCTTTGTTCTTTTTTTTGTATGAAAATGCCTTTTTACCTTTTGCTATGGGTATTATTGCTATGTC
+TGCTTTTGCAATGATGTTTGTCAAACATAAGCATGCATTTCTCTGTTTGTTTTTGTTACCTTCTCTTGCC
+ACTGTAGCTTATTTTAATATGGTCTATATGCCTGCTAGTTGGGTGATGCGTATTATGACATGGTTGGATA
+TGGTTGATACTAGTTTGTCTGGTTTTAAGCTAAAAGACTGTGTTATGTATGCATCAGCTGTAGTGTTACT
+AATCCTTATGACAGCAAGAACTGTGTATGATGATGGTGCTAGGAGAGTGTGGACACTTATGAATGTCTTG
+ACACTCGTTTATAAAGTTTATTATGGTAATGCTTTAGATCAAGCCATTTCCATGTGGGCTCTTATAATCT
+CTGTTACTTCTAACTACTCAGGTGTAGTTACAACTGTCATGTTTTTGGCCAGAGGTATTGTTTTTATGTG
+TGTTGAGTATTGCCCTATTTTCTTCATAACTGGTAATACACTTCAGTGTATAATGCTAGTTTATTGTTTC
+TTAGGCTATTTTTGTACTTGTTACTTTGGCCTCTTTTGTTTACTCAACCGCTACTTTAGACTGACTCTTG
+GTGTTTATGATTACTTAGTTTCTACACAGGAGTTTAGATATATGAATTCACAGGGACTACTCCCACCCAA
+GAATAGCATAGATGCCTTCAAACTCAACATTAAATTGTTGGGTGTTGGTGGCAAACCTTGTATCAAAGTA
+GCCACTGTACAGTCTAAAATGTCAGATGTAAAGTGCACATCAGTAGTCTTACTCTCAGTTTTGCAACAAC
+TCAGAGTAGAATCATCATCTAAATTGTGGGCTCAATGTGTCCAGTTACACAATGACATTCTCTTAGCTAA
+AGATACTACTGAAGCCTTTGAAAAAATGGTTTCACTACTTTCTGTTTTGCTTTCCATGCAGGGTGCTGTA
+GACATAAACAAGCTTTGTGAAGAAATGCTGGACAACAGGGCAACCTTACAAGCTATAGCCTCAGAGTTTA
+GTTCCCTTCCATCATATGCAGCTTTTGCTACTGCTCAAGAAGCTTATGAGCAGGCTGTTGCTAATGGTGA
+TTCTGAAGTTGTTCTTAAAAAGTTGAAGAAGTCTTTGAATGTGGCTAAATCTGAATTTGACCGTGATGCA
+GCCATGCAACGTAAGTTGGAAAAGATGGCTGATCAAGCTATGACCCAAATGTATAAACAGGCTAGATCTG
+AGGACAAGAGGGCAAAAGTTACTAGTGCTATGCAGACAATGCTTTTCACTATGCTTAGAAAGTTGGATAA
+TGATGCACTCAACAACATTATCAACAATGCAAGAGATGGTTGTGTTCCCTTGAACATAATACCTCTTACA
+ACAGCAGCCAAACTAATGGTTGTCATACCAGACTATAACACATATAAAAATACGTGTGATGGTACAACAT
+TTACTTATGCATCAGCATTGTGGGAAATCCAACAGGTTGTAGATGCAGATAGTAAAATTGTTCAACTTAG
+TGAAATTAGTATGGACAATTCACCTAATTTAGCATGGCCTCTTATTGTAACAGCTTTAAGGGCCAATTCT
+GCTGTCAAATTACAGAATAATGAGCTTAGTCCTGTTGCACTACGACAGATGTCTTGTGCTGCCGGTACTA
+CACAAACTGCTTGCACTGATGACAATGCGTTAGCTTACTACAACACAACAAAGGGAGGTAGGTTTGTACT
+TGCACTGTTATCCGATTTACAGGATTTGAAATGGGCTAGATTCCCTAAGAGTGATGGAACTGGTACTATC
+TATACAGAACTGGAACCACCTTGTAGGTTTGTTACAGACACACCTAAAGGTCCTAAAGTGAAGTATTTAT
+ACTTTATTAAAGGATTAAACAACCTAAATAGAGGTATGGTACTTGGTAGTTTAGCTGCCACAGTACGTCT
+ACAAGCTGGTAATGCAACAGAAGTGCCTGCCAATTCAACTGTATTATCTTTCTGTGCTTTTGCTGTAGAT
+GCTGCTAAAGCTTACAAAGATTATCTAGCTAGTGGGGGACAACCAATCACTAATTGTGTTAAGATGTTGT
+GTACACACACTGGTACTGGTCAGGCAATAACAGTTACACCGGAAGCCAATATGGATCAAGAATCCTTTGG
+TGGTGCATCGTGTTGTCTGTACTGCCGTTGCCACATAGATCATCCAAATCCTAAAGGATTTTGTGACTTA
+AAAGGTAAGTATGTACAAATACCTACAACTTGTGCTAATGACCCTGTGGGTTTTACACTTAAAAACACAG
+TCTGTACCGTCTGCGGTATGTGGAAAGGTTATGGCTGTAGTTGTGATCAACTCCGCGAACCCATGCTTCA
+GTCAGCTGATGCACAATCGTTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCA
+CAGGCACTAGTACTGATGTCGTATACAGGGCTTTTGACATCTACAATGATAAAGTAGCTGGTTTTGCTAA
+ATTCCTAAAAACTAATTGTTGTCGCTTCCAAGAAAAGGACGAAGATGACAATTTAATTGATTCTTACTTT
+GTAGTTAAGAGACACACTTTCTCTAACTACCAACATGAAGAAACAATTTATAATTTACTTAAGGATTGTC
+CAGCTGTTGCTAAACATGACTTCTTTAAGTTTAGAATAGACGGTGACATGGTACCACATATATCACGTCA
+ACGTCTTACTAAATACACAATGGCAGACCTCGTCTATGCTTTAAGGCATTTTGATGAAGGTAATTGTGAC
+ACATTAAAAGAAATACTTGTCACATACAATTGTTGTGATGATGATTATTTCAATAAAAAGGACTGGTATG
+ATTTTGTAGAAAACCCAGATATATTACGCGTATACGCCAACTTAGGTGAACGTGTACGCCAAGCTTTGTT
+AAAAACAGTACAATTCTGTGATGCCATGCGAAATGCTGGTATTGTTGGTGTACTGACATTAGATAATCAA
+GATCTCAATGGTAACTGGTATGATTTCGGTGATTTCATACAAACCACGCCAGGTAGTGGAGTTCCTGTTG
+TAGATTCTTATTATTCATTGTTAATGCCTATATTAACCTTGACCAGGGCTTTAACTGCAGAGTCACATGT
+TGACACTGACTTAACAAAGCCTTACATTAAGTGGGATTTGTTAAAATATGACTTCACGGAAGAGAGGTTA
+AAACTCTTTGACCGTTATTTTAAATATTGGGATCAGACATACCACCCAAATTGTGTTAACTGTTTGGATG
+ACAGATGCATTCTGCATTGTGCAAACTTTAATGTTTTATTCTCTACAGTGTTCCCACCTACAAGTTTTGG
+ACCACTAGTGAGAAAAATATTTGTTGATGGTGTTCCATTTGTAGTTTCAACTGGATACCACTTCAGAGAG
+CTAGGTGTTGTACATAATCAGGATGTAAACTTACATAGCTCTAGACTTAGTTTTAAGGAATTACTTGTGT
+ATGCTGCTGACCCTGCTATGCACGCTGCTTCTGGTAATCTATTACTAGATAAACGCACTACGTGCTTTTC
+AGTAGCTGCACTTACTAACAATGTTGCTTTTCAAACTGTCAAACCCGGTAATTTTAACAAAGACTTCTAT
+GACTTTGCTGTGTCTAAGGGTTTCTTTAAGGAAGGAAGTTCTGTTGAATTAAAACACTTCTTCTTTGCTC
+AGGATGGTAATGCTGCTATCAGCGATTATGACTACTATCGTTATAATCTACCAACAATGTGTGATATCAG
+ACAACTACTATTTGTAGTTGAAGTTGTTGATAAGTACTTTGATTGTTACGATGGTGGCTGTATTAATGCT
+AACCAAGTCATCGTCAACAACCTAGACAAATCAGCTGGTTTTCCATTTAATAAATGGGGTAAGGCTAGAC
+TTTATTATGATTCAATGAGTTATGAGGATCAAGATGCACTTTTCGCATATACAAAACGTAATGTCATCCC
+TACTATAACTCAAATGAATCTTAAGTATGCCATTAGTGCAAAGAATAGAGCTCGCACCGTAGCTGGTGTC
+TCTATCTGTAGTACTATGACCAATAGACAGTTTCATCAAAAATTATTGAAATCAATAGCCGCCACTAGAG
+GAGCTACTGTAGTAATTGGAACAAGCAAATTCTATGGTGGTTGGCACAACATGTTAAAAACTGTTTATAG
+TGATGTAGAAAACCCTCACCTTATGGGTTGGGATTATCCTAAATGTGATAGAGCCATGCCTAACATGCTT
+AGAATTATGGCCTCACTTGTTCTTGCTCGCAAACATACAACGTGTTGTAGCTTGTCACACCGTTTCTATA
+GATTAGCTAATGAGTGTGCTCAAGTATTGAGTGAAATGGTCATGTGTGGCGGTTCACTATATGTTAAACC
+AGGTGGAACCTCATCAGGAGATGCCACAACTGCTTATGCTAATAGTGTTTTTAACATTTGTCAAGCTGTC
+ACGGCCAATGTTAATGCACTTTTATCTACTGATGGTAACAAAATTGCCGATAAGTATGTCCGCAATTTAC
+AACACAGACTTTATGAGTGTCTCTATAGAAATAGAGATGTTGACACAGACTTTGTGAATGAGTTTTACGC
+ATATTTGCGTAAACATTTCTCAATGATGATACTCTCTGACGATGCTGTTGTGTGTTTCAATAGCACTTAT
+GCATCTCAAGGTCTAGTGGCTAGCATAAAGAACTTTAAGTCAGTTCTTTATTATCAAAACAATGTTTTTA
+TGTCTGAAGCAAAATGTTGGACTGAGACTGACCTTACTAAAGGACCTCATGAATTTTGCTCTCAACATAC
+AATGCTAGTTAAACAGGGTGATGATTATGTGTACCTTCCTTACCCAGATCCATCAAGAATCCTAGGGGCC
+GGCTGTTTTGTAGATGATATCGTAAAAACAGATGGTACACTTATGATTGAACGGTTCGTGTCTTTAGCTA
+TAGATGCTTACCCACTTACTAAACATCCTAATCAGGAGTATGCTGATGTCTTTCATTTGTACTTACAATA
+CATAAGAAAGCTACATGATGAGTTAACAGGACACATGTTAGACATGTATTCTGTTATGCTTACTAATGAT
+AACACTTCAAGGTATTGGGAACCTGAGTTTTATGAGGCTATGTACACACCGCATACAGTCTTACAGGCTG
+TTGGGGCTTGTGTTCTTTGCAATTCACAGACTTCATTAAGATGTGGTGCTTGCATACGTAGACCATTCTT
+ATGTTGTAAATGCTGTTACGACCATGTCATATCAACATCACATAAATTAGTCTTGTCTGTTAATCCGTAT
+GTTTGCAATGCTCCAGGTTGTGATGTCACAGATGTGACTCAACTTTACTTAGGAGGTATGAGCTATTATT
+GTAAATCACATAAACCACCCATTAGTTTTCCATTGTGTGCTAATGGACAAGTTTTTGGTTTATATAAAAA
+TACATGTGTTGGTAGCGATAATGTTACTGACTTTAATGCAATTGCAACATGTGACTGGACAAATGCTGGT
+GATTACATTTTAGCTAACACCTGTACTGAAAGACTCAAGCTTTTTGCAGCAGAAACGCTCAAAGCTACTG
+AGGAGACATTTAAACTGTCTTATGGTATTGCTACTGTACGTGAAGTGCTGTCTGACAGAGAATTACATCT
+TTCATGGGAAGTTGGTAAACCTAGACCACCACTTAACCGAAATTATGTCTTTACTGGTTATCGTGTAACT
+AAAAACAGTAAAGTACAAATAGGAGAGTACACCTTTGAAAAAGGTGACTATGGTGATGCTGTTGTTTACC
+GAGGTACAACAACTTACAAATTAAATGTTGGTGATTATTTTGTGCTGACATCACATACAGTAATGCCATT
+AAGTGCACCTACACTAGTGCCACAAGAGCACTATGTTAGAATTACTGGCTTATACCCAACACTCAATATC
+TCAGATGAGTTTTCTAGCAATGTTGCAAATTATCAAAAGGTTGGTATGCAAAAGTATTCTACACTCCAGG
+GACCACCTGGTACTGGTAAGAGTCATTTTGCTATTGGCCTAGCTCTCTACTACCCTTCTGCTCGCATAGT
+GTATACAGCTTGCTCTCATGCCGCTGTTGATGCACTATGTGAGAAGGCATTAAAATATTTGCCTATAGAT
+AAATGTAGTAGAATTATACCTGCACGTGCTCGTGTAGAGTGTTTTGATAAATTCAAAGTGAATTCAACAT
+TAGAACAGTATGTCTTTTGTACTGTAAATGCATTGCCTGAGACGACAGCAGATATAGTTGTCTTTGATGA
+AATTTCAATGGCCACAAATTATGATTTGAGTGTTGTCAATGCCAGATTACGTGCTAAGCACTATGTGTAC
+ATTGGCGACCCTGCTCAATTACCTGCACCACGCACATTGCTAACTAAGGGCACACTAGAACCAGAATATT
+TCAATTCAGTGTGTAGACTTATGAAAACTATAGGTCCAGACATGTTCCTCGGAACTTGTCGGCGTTGTCC
+TGCTGAAATTGTTGACACTGTGAGTGCTTTGGTTTATGATAATAAGCTTAAAGCACATAAAGACAAATCA
+GCTCAATGCTTTAAAATGTTTTATAAGGGTGTTATCACGCATGATGTTTCATCTGCAATTAACAGGCCAC
+AAATAGGCGTGGTAAGAGAATTCCTTACACGTAACCCTGCTTGGAGAAAAGCTGTCTTTATTTCACCTTA
+TAATTCACAGAATGCTGTAGCCTCAAAGATTTTGGGACTACCAACTCAAACTGTTGATTCATCACAGGGC
+TCAGAATATGACTATGTCATATTCACTCAAACCACTGAAACAGCTCACTCTTGTAATGTAAACAGATTTA
+ATGTTGCTATTACCAGAGCAAAAGTAGGCATACTTTGCATAATGTCTGATAGAGACCTTTATGACAAGTT
+GCAATTTACAAGTCTTGAAATTCCACGTAGGAATGTGGCAACTTTACAAGCTGAAAATGTAACAGGACTC
+TTTAAAGATTGTAGTAAGGTAATCACTGGGTTACATCCTACACAGGCACCTACACACCTCAGTGTTGACA
+CTAAATTCAAAACTGAAGGTTTATGTGTTGACATACCTGGCATACCTAAGGACATGACCTATAGAAGACT
+CATCTCTATGATGGGTTTTAAAATGAATTATCAAGTTAATGGTTACCCTAACATGTTTATCACCCGCGAA
+GAAGCTATAAGACATGTACGTGCATGGATTGGCTTCGATGTCGAGGGGTGTCATGCTACTAGAGAAGCTG
+TTGGTACCAATTTACCTTTACAGCTAGGTTTTTCTACAGGTGTTAACCTAGTTGCTGTACCTACAGGTTA
+TGTTGATACACCTAATAATACAGATTTTTCCAGAGTTAGTGCTAAACCACCGCCTGGAGATCAATTTAAA
+CACCTCATACCACTTATGTACAAAGGACTTCCTTGGAATGTAGTGCGTATAAAGATTGTACAAATGTTAA
+GTGACACACTTAAAAATCTCTCTGACAGAGTCGTATTTGTCTTATGGGCACATGGCTTTGAGTTGACATC
+TATGAAGTATTTTGTGAAAATAGGACCTGAGCGCACCTGTTGTCTATGTGATAGACGTGCCACATGCTTT
+TCCACTGCTTCAGACACTTATGCCTGTTGGCATCATTCTATTGGATTTGATTACGTCTATAATCCGTTTA
+TGATTGATGTTCAACAATGGGGTTTTACAGGTAACCTACAAAGCAACCATGATCTGTATTGTCAAGTCCA
+TGGTAATGCACATGTAGCTAGTTGTGATGCAATCATGACTAGGTGTCTAGCTGTCCACGAGTGCTTTGTT
+AAGCGTGTTGACTGGACTATTGAATATCCTATAATTGGTGATGAACTGAAGATTAATGCGGCTTGTAGAA
+AGGTTCAACACATGGTTGTTAAAGCTGCATTATTAGCAGACAAATTCCCAGTTCTTCACGACATTGGTAA
+CCCTAAAGCTATTAAGTGTGTACCTCAAGCTGATGTAGAATGGAAGTTCTATGATGCACAGCCTTGTAGT
+GACAAAGCTTATAAAATAGAAGAATTATTCTATTCTTATGCCACACATTCTGACAAATTCACAGATGGTG
+TATGCCTATTTTGGAATTGCAATGTCGATAGATATCCTGCTAATTCCATTGTTTGTAGATTTGACACTAG
+AGTGCTATCTAACCTTAACTTGCCTGGTTGTGATGGTGGCAGTTTGTATGTAAATAAACATGCATTCCAC
+ACACCAGCTTTTGATAAAAGTGCTTTTGTTAATTTAAAACAATTACCATTTTTCTATTACTCTGACAGTC
+CATGTGAGTCTCATGGAAAACAAGTAGTGTCAGATATAGATTATGTACCACTAAAGTCTGCTACGTGTAT
+AACACGTTGCAATTTAGGTGGTGCTGTCTGTAGACATCATGCTAATGAGTACAGATTGTATCTCGATGCT
+TATAACATGATGATCTCAGCTGGCTTTAGCTTGTGGGTTTACAAACAATTTGATACTTATAACCTCTGGA
+ACACTTTTACAAGACTTCAGAGTTTAGAAAATGTGGCTTTTAATGTTGTAAATAAGGGACACTTTGATGG
+ACAACAGGGTGAAGTACCAGTTTCTATCATTAATAACACTGTTTACACAAAAGTTGATGGTGTTGATGTA
+GAATTGTTTGAAAATAAAACAACATTACCTGTTAATGTAGCATTTGAGCTTTGGGCTAAGCGCAACATTA
+AACCAGTACCAGAGGTGAAAATACTCAATAATTTGGGTGTGGACATTGCTGCTAATACTGTGATCTGGGA
+CTACAAAAGAGATGCTCCAGCACATATATCTACTATTGGTGTTTGTTCTATGACTGACATAGCCAAGAAA
+CCAACTGAAACGATTTGTGCACCACTCACTGTCTTTTTTGATGGTAGAGTTGATGGTCAAGTAGACTTAT
+TTAGAAATGCCCGTAATGGTGTTCTTATTACAGAAGGTAGTGTTAAAGGTTTACAACCATCTGTAGGTCC
+CAAACAAGCTAGTCTTAATGGAGTCACATTAATTGGAGAAGCCGTAAAAACACAGTTCAATTATTATAAG
+AAAGTTGATGGTGTTGTCCAACAATTACCTGAAACTTACTTTACTCAGAGTAGAAATTTACAAGAATTTA
+AACCCAGGAGTCAAATGGAAATTGATTTCTTAGAATTAGCTATGGATGAATTCATTGAACGGTATAAATT
+AGAAGGCTATGCCTTCGAACATATCGTTTATGGAGATTTTAGTCATAGTCAGTTAGGTGGTTTACATCTA
+CTGATTGGACTAGCTAAACGTTTTAAGGAATCACCTTTTGAATTAGAAGATTTTATTCCTATGGACAGTA
+CAGTTAAAAACTATTTCATAACAGATGCGCAAACAGGTTCATCTAAGTGTGTGTGTTCTGTTATTGATTT
+ATTACTTGATGATTTTGTTGAAATAATAAAATCCCAAGATTTATCTGTAGTTTCTAAGGTTGTCAAAGTG
+ACTATTGACTATACAGAAATTTCATTTATGCTTTGGTGTAAAGATGGCCATGTAGAAACATTTTACCCAA
+AATTACAATCTAGTCAAGCGTGGCAACCGGGTGTTGCTATGCCTAATCTTTACAAAATGCAAAGAATGCT
+ATTAGAAAAGTGTGACCTTCAAAATTATGGTGATAGTGCAACATTACCTAAAGGCATAATGATGAATGTC
+GCAAAATATACTCAACTGTGTCAATATTTAAACACATTAACATTAGCTGTACCCTATAATATGAGAGTTA
+TACATTTTGGTGCTGGTTCTGATAAAGGAGTTGCACCAGGTACAGCTGTTTTAAGACAGTGGTTGCCTAC
+GGGTACGCTGCTTGTCGATTCAGATCTTAATGACTTTGTCTCTGATGCAGATTCAACTTTGATTGGTGAT
+TGTGCAACTGTACATACAGCTAATAAATGGGATCTCATTATTAGTGATATGTACGACCCTAAGACTAAAA
+ATGTTACAAAAGAAAATGACTCTAAAGAGGGTTTTTTCACTTACATTTGTGGGTTTATACAACAAAAGCT
+AGCTCTTGGAGGTTCCGTGGCTATAAAGATAACAGAACATTCTTGGAATGCTGATCTTTATAAGCTCATG
+GGACACTTCGCATGGTGGACAGCCTTTGTTACTAATGTGAATGCGTCATCATCTGAAGCATTTTTAATTG
+GATGTAATTATCTTGGCAAACCACGCGAACAAATAGATGGTTATGTCATGCATGCAAATTACATATTTTG
+GAGGAATACAAATCCAATTCAGTTGTCTTCCTATTCTTTATTTGACATGAGTAAATTTCCCCTTAAATTA
+AGGGGTACTGCTGTTATGTCTTTAAAAGAAGGTCAAATCAATGATATGATTTTATCTCTTCTTAGTAAAG
+GTAGACTTATAATTAGAGAAAACAACAGAGTTGTTATTTCTAGTGATGTTCTTGTTAACAACTAAACGAA
+CAATGTTTGTTTTTCTTGTTTTATTGCCACTAGTCTCTAGTCAGTGTGTTAATCTTACAACCAGAACTCA
+ATTACCCCCTGCATACACTAATTCTTTCACACGTGGTGTTTATTACCCTGACAAAGTTTTCAGATCCTCA
+GTTTTACATTCAACTCAGGACTTGTTCTTACCTTTCTTTTCCAATGTTACTTGGTTCCATGCTATACATG
+TCTCTGGGACCAATGGTACTAAGAGGTTTGATAACCCTGTCCTACCATTTAATGATGGTGTTTATTTTGC
+TTCCACTGAGAAGTCTAACATAATAAGAGGCTGGATTTTTGGTACTACTTTAGATTCGAAGACCCAGTCC
+CTACTTATTGTTAATAACGCTACTAATGTTGTTATTAAAGTCTGTGAATTTCAATTTTGTAATGATCCAT
+TTTTGGGTGTTTATTACCACAAAAACAACAAAAGTTGGATGGAAAGTGAGTTCAGAGTTTATTCTAGTGC
+GAATAATTGCACTTTTGAATATGTCTCTCAGCCTTTTCTTATGGACCTTGAAGGAAAACAGGGTAATTTC
+AAAAATCTTAGGGAATTTGTGTTTAAGAATATTGATGGTTATTTTAAAATATATTCTAAGCACACGCCTA
+TTAATTTAGTGCGTGATCTCCCTCAGGGTTTTTCGGCTTTAGAACCATTGGTAGATTTGCCAATAGGTAT
+TAACATCACTAGGTTTCAAACTTTACTTGCTTTACATAGAAGTTATTTGACTCCTGGTGATTCTTCTTCA
+GGTTGGACAGCTGGTGCTGCAGCTTATTATGTGGGTTATCTTCAACCTAGGACTTTTCTATTAAAATATA
+ATGAAAATGGAACCATTACAGATGCTGTAGACTGTGCACTTGACCCTCTCTCAGAAACAAAGTGTACGTT
+GAAATCCTTCACTGTAGAAAAAGGAATCTATCAAACTTCTAACTTTAGAGTCCAACCAACAGAATCTATT
+GTTAGATTTCCTAATATTACAAACTTGTGCCCTTTTGGTGAAGTTTTTAACGCCACCAGATTTGCATCTG
+TTTATGCTTGGAACAGGAAGAGAATCAGCAACTGTGTTGCTGATTATTCTGTCCTATATAATTCCGCATC
+ATTTTCCACTTTTAAGTGTTATGGAGTGTCTCCTACTAAATTAAATGATCTCTGCTTTACTAATGTCTAT
+GCAGATTCATTTGTAATTAGAGGTGATGAAGTCAGACAAATCGCTCCAGGGCAAACTGGAAAGATTGCTG
+ATTATAATTATAAATTACCAGATGATTTTACAGGCTGCGTTATAGCTTGGAATTCTAACAATCTTGATTC
+TAAGGTTGGTGGTAATTATAATTACCTGTATAGATTGTTTAGGAAGTCTAATCTCAAACCTTTTGAGAGA
+GATATTTCAACTGAAATCTATCAGGCCGGTAGCACACCTTGTAATGGTGTTGAAGGTTTTAATTGTTACT
+TTCCTTTACAATCATATGGTTTCCAACCCACTAATGGTGTTGGTTACCAACCATACAGAGTAGTAGTACT
+TTCTTTTGAACTTCTACATGCACCAGCAACTGTTTGTGGACCTAAAAAGTCTACTAATTTGGTTAAAAAC
+AAATGTGTCAATTTCAACTTCAATGGTTTAACAGGCACAGGTGTTCTTACTGAGTCTAACAAAAAGTTTC
+TGCCTTTCCAACAATTTGGCAGAGACATTGCTGACACTACTGATGCTGTCCGTGATCCACAGACACTTGA
+GATTCTTGACATTACACCATGTTCTTTTGGTGGTGTCAGTGTTATAACACCAGGAACAAATACTTCTAAC
+CAGGTTGCTGTTCTTTATCAGGATGTTAACTGCACAGAAGTCCCTGTTGCTATTCATGCAGATCAACTTA
+CTCCTACTTGGCGTGTTTATTCTACAGGTTCTAATGTTTTTCAAACACGTGCAGGCTGTTTAATAGGGGC
+TGAACATGTCAACAACTCATATGAGTGTGACATACCCATTGGTGCAGGTATATGCGCTAGTTATCAGACT
+CAGACTAATTCTCCTCGGCGGGCACGTAGTGTAGCTAGTCAATCCATCATTGCCTACACTATGTCACTTG
+GTGCAGAAAATTCAGTTGCTTACTCTAATAACTCTATTGCCATACCCACAAATTTTACTATTAGTGTTAC
+CACAGAAATTCTACCAGTGTCTATGACCAAGACATCAGTAGATTGTACAATGTACATTTGTGGTGATTCA
+ACTGAATGCAGCAATCTTTTGTTGCAATATGGCAGTTTTTGTACACAATTAAACCGTGCTTTAACTGGAA
+TAGCTGTTGAACAAGACAAAAACACCCAAGAAGTTTTTGCACAAGTCAAACAAATTTACAAAACACCACC
+AATTAAAGATTTTGGTGGTTTTAATTTTTCACAAATATTACCAGATCCATCAAAACCAAGCAAGAGGTCA
+TTTATTGAAGATCTACTTTTCAACAAAGTGACACTTGCAGATGCTGGCTTCATCAAACAATATGGTGATT
+GCCTTGGTGATATTGCTGCTAGAGACCTCATTTGTGCACAAAAGTTTAACGGCCTTACTGTTTTGCCACC
+TTTGCTCACAGATGAAATGATTGCTCAATACACTTCTGCACTGTTAGCGGGTACAATCACTTCTGGTTGG
+ACCTTTGGTGCAGGTGCTGCATTACAAATACCATTTGCTATGCAAATGGCTTATAGGTTTAATGGTATTG
+GAGTTACACAGAATGTTCTCTATGAGAACCAAAAATTGATTGCCAACCAATTTAATAGTGCTATTGGCAA
+AATTCAAGACTCACTTTCTTCCACAGCAAGTGCACTTGGAAAACTTCAAGATGTGGTCAACCAAAATGCA
+CAAGCTTTAAACACGCTTGTTAAACAACTTAGCTCCAATTTTGGTGCAATTTCAAGTGTTTTAAATGATA
+TCCTTTCACGTCTTGACAAAGTTGAGGCTGAAGTGCAAATTGATAGGTTGATCACAGGCAGACTTCAAAG
+TTTGCAGACATATGTGACTCAACAATTAATTAGAGCTGCAGAAATCAGAGCTTCTGCTAATCTTGCTGCT
+ACTAAAATGTCAGAGTGTGTACTTGGACAATCAAAAAGAGTTGATTTTTGTGGAAAGGGCTATCATCTTA
+TGTCCTTCCCTCAGTCAGCACCTCATGGTGTAGTCTTCTTGCATGTGACTTATGTCCCTGCACAAGAAAA
+GAACTTCACAACTGCTCCTGCCATTTGTCATGATGGAAAAGCACACTTTCCTCGTGAAGGTGTCTTTGTT
+TCAAATGGCACACACTGGTTTGTAACACAAAGGAATTTTTATGAACCACAAATCATTACTACAGACAACA
+CATTTGTGTCTGGTAACTGTGATGTTGTAATAGGAATTGTCAACAACACAGTTTATGATCCTTTGCAACC
+TGAATTAGACTCATTCAAGGAGGAGTTAGATAAATATTTTAAGAATCATACATCACCAGATGTTGATTTA
+GGTGACATCTCTGGCATTAATGCTTCAGTTGTAAACATTCAAAAAGAAATTGACCGCCTCAATGAGGTTG
+CCAAGAATTTAAATGAATCTCTCATCGATCTCCAAGAACTTGGAAAGTATGAGCAGTATATAAAATGGCC
+ATGGTACATTTGGCTAGGTTTTATAGCTGGCTTGATTGCCATAGTAATGGTGACAATTATGCTTTGCTGT
+ATGACCAGTTGCTGTAGTTGTCTCAAGGGCTGTTGTTCTTGTGGATCCTGCTGCAAATTTGATGAAGACG
+ACTCTGAGCCAGTGCTCAAAGGAGTCAAATTACATTACACATAAACGAACTTATGGATTTGTTTATGAGA
+ATCTTCACAATTGGAACTGTAACTTTGAAGCAAGGTGAAATCAAGGATGCTACTCCTTCAGATTTTGTTC
+GCGCTACTGCAACGATACCGATACAAGCCTCACTCCCTTTCGGATGGCTTATTGTTGGCGTTGCACTTCT
+TGCTGTTTTTCAGAGCGCTTCCAAAATCATAACCCTCAAAAAGAGATGGCAACTAGCACTCTCCAAGGGT
+GTTCACTTTGTTTGCAACTTGCTGTTGTTGTTTGTAACAGTTTACTCACACCTTTTGCTCGTTGCTGCTG
+GCCTTGAAGCCCCTTTTCTCTATCTTTATGCTTTAGTCTACTTCTTGCAGAGTATAAACTTTGTAAGAAT
+AATAATGAGGCTTTGGCTTTGCTGGAAATGCCGTTCCAAAAACCCATTACTTTATGATGCCAACTATTTT
+CTTTGCTGGCATACTAATTGTTACGACTATTGTATACCTTACAATAGTGTAACTTCTTCAATTGTCATTA
+CTTCAGGTGATGGCACAACAAGTCCTATTTCTGAACATGACTACCAGATTGGTGGTTATACTGAAAAATG
+GGAATCTGGAGTAAAAGACTGTGTTGTATTACACAGTTACTTCACTTCAGACTATTACCAGCTGTACTCA
+ACTCAATTGAGTACAGACACTGGTGTTGAACATGTTACCTTCTTCATCTACAATAAAATTGTTGATGAGC
+CTGAAGAACATGTCCAAATTCACACAATCGACGGTTCATCCGGAGTTGTTAATCCAGTAATGGAACCAAT
+TTATGATGAACCGACGACGACTACTAGCGTGCCTTTGTAAGCACAAGCTGATGAGTACGAACTTATGTAC
+TCATTCGTTTCGGAAGAGACAGGTACGTTAATAGTTAATAGCGTACTTCTTTTTCTTGCTTTCGTGGTAT
+TCTTGCTAGTTACACTAGCCATCCTTACTGCGCTTCGATTGTGTGCGTACTGCTGCAATATTGTTAACGT
+GAGTCTTGTAAAACCTTCTTTTTACGTTTACTCTCGTGTTAAAAATCTGAATTCTTCTAGAGTTCCTGAT
+CTTCTGGTCTAAACGAACTAAATATTATATTAGTTTTTCTGTTTGGAACTTTAATTTTAGCCATGGCAGA
+TTCCAACGGTACTATTACCGTTGAAGAGCTTAAAAAGCTCCTTGAACAATGGAACCTAGTAATAGGTTTC
+CTATTCCTTACATGGATTTGTCTTCTACAATTTGCCTATGCCAACAGGAATAGGTTTTTGTATATAATTA
+AGTTAATTTTCCTCTGGCTGTTATGGCCAGTAACTTTAGCTTGTTTTGTGCTTGCTGCTGTTTACAGAAT
+AAATTGGATCACCGGTGGAATTGCTATCGCAATGGCTTGTCTTGTAGGCTTGATGTGGCTCAGCTACTTC
+ATTGCTTCTTTCAGACTGTTTGCGCGTACGCGTTCCATGTGGTCATTCAATCCAGAAACTAACATTCTTC
+TCAACGTGCCACTCCATGGCACTATTCTGACCAGACCGCTTCTAGAAAGTGAACTCGTAATCGGAGCTGT
+GATCCTTCGTGGACATCTTCGTATTGCTGGACACCATCTAGGACGCTGTGACATCAAGGACCTGCCTAAA
+GAAATCACTGTTGCTACATCACGAACGCTTTCTTATTACAAATTGGGAGCTTCGCAGCGTGTAGCAGGTG
+ACTCAGGTTTTGCTGCATACAGTCGCTACAGGATTGGCAACTATAAATTAAACACAGACCATTCCAGTAG
+CAGTGACAATATTGCTTTGCTTGTACAGTAAGTGACAACAGATGTTTCATCTCGTTGACTTTCAGGTTAC
+TATAGCAGAGATATTACTAATTATTATGAGGACTTTTAAAGTTTCCATTTGGAATCTTGATTACATCATA
+AACCTCATAATTAAAAATTTATCTAAGTCACTAACTGAGAATAAATATTCTCAATTAGATGAAGAGCAAC
+CAATGGAGATTGATTAAACGAACATGAAAATTATTCTTTTCTTGGCACTGATAACACTCGCTACTTGTGA
+GCTTTATCACTACCAAGAGTGTGTTAGAGGTACAACAGTACTTTTAAAAGAACCTTGCTCTTCTGGAACA
+TACGAGGGCAATTCACCATTTCATCCTCTAGCTGATAACAAATTTGCACTGACTTGCTTTAGCACTCAAT
+TTGCTTTTGCTTGTCCTGACGGCGTAAAACACGTCTATCAGTTACGTGCCAGATCAGTTTCACCTAAACT
+GTTCATCAGACAAGAGGAAGTTCAAGAACTTTACTCTCCAATTTTTCTTATTGTTGCGGCAATAGTGTTT
+ATAACACTTTGCTTCACACTCAAAAGAAAGACAGAATGATTGAACTTTCATTAATTGACTTCTATTTGTG
+CTTTTTAGCCTTTCTGCTATTCCTTGTTTTAATTATGCTTATTATCTTTTGGTTCTCACTTGAACTGCAA
+GATCATAATGAAACTTGTCACGCCTAAACGAACATGAAATTTCTTGTTTTCTTAGGAATCATCACAACTG
+TAGCTGCATTTCACCAAGAATGTAGTTTACAGTCATGTACTCAACATCAACCATATGTAGTTGATGACCC
+GTGTCCTATTCACTTCTATTCTAAATGGTATATTAGAGTAGGAGCTAGAAAATCAGCACCTTTAATTGAA
+TTGTGCGTGGATGAGGCTGGTTCTAAATCACCCATTCAGTACATCGATATCGGTAATTATACAGTTTCCT
+GTTTACCTTTTACAATTAATTGCCAGGAACCTAAATTGGGTAGTCTTGTAGTGCGTTGTTCGTTCTATGA
+AGACTTTTTAGAGTATCATGACGTTCGTGTTGTTTTAGATTTCATCTAAACGAACAAACTAAAATGTCTG
+ATAATGGACCCCAAAATCAGCGAAATGCACCCCGCATTACGTTTGGTGGACCCTCAGATTCAACTGGCAG
+TAACCAGAATGGAGAACGCAGTGGGGCGCGATCAAAACAACGTCGGCCCCAAGGTTTACCCAATAATACT
+GCGTCTTGGTTCACCGCTCTCACTCAACATGGCAAGGAAGACCTTAAATTCCCTCGAGGACAAGGCGTTC
+CAATTAACACCAATAGCAGTCCAGATGACCAAATTGGCTACTACCGAAGAGCTACCAGACGAATTCGTGG
+TGGTGACGGTAAAATGAAAGATCTCAGTCCAAGATGGTATTTCTACTACCTAGGAACTGGGCCAGAAGCT
+GGACTTCCCTATGGTGCTAACAAAGACGGCATCATATGGGTTGCAACTGAGGGAGCCTTGAATACACCAA
+AAGATCACATTGGCACCCGCAATCCTGCTAACAATGCTGCAATCGTGCTACAACTTCCTCAAGGAACAAC
+ATTGCCAAAAGGCTTCTACGCAGAAGGGAGCAGAGGCGGCAGTCAAGCCTCTTCTCGTTCCTCATCACGT
+AGTCGCAACAGTTCAAGAAATTCAACTCCAGGCAGCAGTAGGGGAACTTCTCCTGCTAGAATGGCTGGCA
+ATGGCGGTGATGCTGCTCTTGCTTTGCTGCTGCTTGACAGATTGAACCAGCTTGAGAGCAAAATGTCTGG
+TAAAGGCCAACAACAACAAGGCCAAACTGTCACTAAGAAATCTGCTGCTGAGGCTTCTAAGAAGCCTCGG
+CAAAAACGTACTGCCACTAAAGCATACAATGTAACACAAGCTTTCGGCAGACGTGGTCCAGAACAAACCC
+AAGGAAATTTTGGGGACCAGGAACTAATCAGACAAGGAACTGATTACAAACATTGGCCGCAAATTGCACA
+ATTTGCCCCCAGCGCTTCAGCGTTCTTCGGAATGTCGCGCATTGGCATGGAAGTCACACCTTCGGGAACG
+TGGTTGACCTACACAGGTGCCATCAAATTGGATGACAAAGATCCAAATTTCAAAGATCAAGTCATTTTGC
+TGAATAAGCATATTGACGCATACAAAACATTCCCACCAACAGAGCCTAAAAAGGACAAAAAGAAGAAGGC
+TGATGAAACTCAAGCCTTACCGCAGAGACAGAAGAAACAGCAAACTGTGACTCTTCTTCCTGCTGCAGAT
+TTGGATGATTTCTCCAAACAATTGCAACAATCCATGAGCAGTGCTGACTCAACTCAGGCCTAAACTCATG
+CAGACCACACAAGGCAGATGGGCTATATAAACGTTTTCGCTTTTCCGTTTACGATATATAGTCTACTCTT
+GTGCAGAATGAATTCTCGTAACTACATAGCACAAGTAGATGTAGTTAACTTTAATCTCACATAGCAATCT
+TTAATCAGTGTGTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTAC
+GATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAAT
+TTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAA
+AAAAAAAAAAAAA
+
diff -r f079716f598c -r 029d90b0c4f6 test-data/NC_045512.2.fasta
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/NC_045512.2.fasta Fri Jul 14 22:07:22 2023 +0000
@@ -0,0 +1,430 @@
+>NC_045512.2 Wuhan seafood market pneumonia virus isolate Wuhan-Hu-1, complete genome
+ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAA
+CGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAAC
+TAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTG
+TTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTC
+CCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTAC
+GTGGCTTTGGAGACTCCGTGGAGGAGGTCTTATCAGAGGCACGTCAACATCTTAAAGATGGCACTTGTGG
+CTTAGTAGAAGTTGAAAAAGGCGTTTTGCCTCAACTTGAACAGCCCTATGTGTTCATCAAACGTTCGGAT
+GCTCGAACTGCACCTCATGGTCATGTTATGGTTGAGCTGGTAGCAGAACTCGAAGGCATTCAGTACGGTC
+GTAGTGGTGAGACACTTGGTGTCCTTGTCCCTCATGTGGGCGAAATACCAGTGGCTTACCGCAAGGTTCT
+TCTTCGTAAGAACGGTAATAAAGGAGCTGGTGGCCATAGTTACGGCGCCGATCTAAAGTCATTTGACTTA
+GGCGACGAGCTTGGCACTGATCCTTATGAAGATTTTCAAGAAAACTGGAACACTAAACATAGCAGTGGTG
+TTACCCGTGAACTCATGCGTGAGCTTAACGGAGGGGCATACACTCGCTATGTCGATAACAACTTCTGTGG
+CCCTGATGGCTACCCTCTTGAGTGCATTAAAGACCTTCTAGCACGTGCTGGTAAAGCTTCATGCACTTTG
+TCCGAACAACTGGACTTTATTGACACTAAGAGGGGTGTATACTGCTGCCGTGAACATGAGCATGAAATTG
+CTTGGTACACGGAACGTTCTGAAAAGAGCTATGAATTGCAGACACCTTTTGAAATTAAATTGGCAAAGAA
+ATTTGACACCTTCAATGGGGAATGTCCAAATTTTGTATTTCCCTTAAATTCCATAATCAAGACTATTCAA
+CCAAGGGTTGAAAAGAAAAAGCTTGATGGCTTTATGGGTAGAATTCGATCTGTCTATCCAGTTGCGTCAC
+CAAATGAATGCAACCAAATGTGCCTTTCAACTCTCATGAAGTGTGATCATTGTGGTGAAACTTCATGGCA
+GACGGGCGATTTTGTTAAAGCCACTTGCGAATTTTGTGGCACTGAGAATTTGACTAAAGAAGGTGCCACT
+ACTTGTGGTTACTTACCCCAAAATGCTGTTGTTAAAATTTATTGTCCAGCATGTCACAATTCAGAAGTAG
+GACCTGAGCATAGTCTTGCCGAATACCATAATGAATCTGGCTTGAAAACCATTCTTCGTAAGGGTGGTCG
+CACTATTGCCTTTGGAGGCTGTGTGTTCTCTTATGTTGGTTGCCATAACAAGTGTGCCTATTGGGTTCCA
+CGTGCTAGCGCTAACATAGGTTGTAACCATACAGGTGTTGTTGGAGAAGGTTCCGAAGGTCTTAATGACA
+ACCTTCTTGAAATACTCCAAAAAGAGAAAGTCAACATCAATATTGTTGGTGACTTTAAACTTAATGAAGA
+GATCGCCATTATTTTGGCATCTTTTTCTGCTTCCACAAGTGCTTTTGTGGAAACTGTGAAAGGTTTGGAT
+TATAAAGCATTCAAACAAATTGTTGAATCCTGTGGTAATTTTAAAGTTACAAAAGGAAAAGCTAAAAAAG
+GTGCCTGGAATATTGGTGAACAGAAATCAATACTGAGTCCTCTTTATGCATTTGCATCAGAGGCTGCTCG
+TGTTGTACGATCAATTTTCTCCCGCACTCTTGAAACTGCTCAAAATTCTGTGCGTGTTTTACAGAAGGCC
+GCTATAACAATACTAGATGGAATTTCACAGTATTCACTGAGACTCATTGATGCTATGATGTTCACATCTG
+ATTTGGCTACTAACAATCTAGTTGTAATGGCCTACATTACAGGTGGTGTTGTTCAGTTGACTTCGCAGTG
+GCTAACTAACATCTTTGGCACTGTTTATGAAAAACTCAAACCCGTCCTTGATTGGCTTGAAGAGAAGTTT
+AAGGAAGGTGTAGAGTTTCTTAGAGACGGTTGGGAAATTGTTAAATTTATCTCAACCTGTGCTTGTGAAA
+TTGTCGGTGGACAAATTGTCACCTGTGCAAAGGAAATTAAGGAGAGTGTTCAGACATTCTTTAAGCTTGT
+AAATAAATTTTTGGCTTTGTGTGCTGACTCTATCATTATTGGTGGAGCTAAACTTAAAGCCTTGAATTTA
+GGTGAAACATTTGTCACGCACTCAAAGGGATTGTACAGAAAGTGTGTTAAATCCAGAGAAGAAACTGGCC
+TACTCATGCCTCTAAAAGCCCCAAAAGAAATTATCTTCTTAGAGGGAGAAACACTTCCCACAGAAGTGTT
+AACAGAGGAAGTTGTCTTGAAAACTGGTGATTTACAACCATTAGAACAACCTACTAGTGAAGCTGTTGAA
+GCTCCATTGGTTGGTACACCAGTTTGTATTAACGGGCTTATGTTGCTCGAAATCAAAGACACAGAAAAGT
+ACTGTGCCCTTGCACCTAATATGATGGTAACAAACAATACCTTCACACTCAAAGGCGGTGCACCAACAAA
+GGTTACTTTTGGTGATGACACTGTGATAGAAGTGCAAGGTTACAAGAGTGTGAATATCACTTTTGAACTT
+GATGAAAGGATTGATAAAGTACTTAATGAGAAGTGCTCTGCCTATACAGTTGAACTCGGTACAGAAGTAA
+ATGAGTTCGCCTGTGTTGTGGCAGATGCTGTCATAAAAACTTTGCAACCAGTATCTGAATTACTTACACC
+ACTGGGCATTGATTTAGATGAGTGGAGTATGGCTACATACTACTTATTTGATGAGTCTGGTGAGTTTAAA
+TTGGCTTCACATATGTATTGTTCTTTCTACCCTCCAGATGAGGATGAAGAAGAAGGTGATTGTGAAGAAG
+AAGAGTTTGAGCCATCAACTCAATATGAGTATGGTACTGAAGATGATTACCAAGGTAAACCTTTGGAATT
+TGGTGCCACTTCTGCTGCTCTTCAACCTGAAGAAGAGCAAGAAGAAGATTGGTTAGATGATGATAGTCAA
+CAAACTGTTGGTCAACAAGACGGCAGTGAGGACAATCAGACAACTACTATTCAAACAATTGTTGAGGTTC
+AACCTCAATTAGAGATGGAACTTACACCAGTTGTTCAGACTATTGAAGTGAATAGTTTTAGTGGTTATTT
+AAAACTTACTGACAATGTATACATTAAAAATGCAGACATTGTGGAAGAAGCTAAAAAGGTAAAACCAACA
+GTGGTTGTTAATGCAGCCAATGTTTACCTTAAACATGGAGGAGGTGTTGCAGGAGCCTTAAATAAGGCTA
+CTAACAATGCCATGCAAGTTGAATCTGATGATTACATAGCTACTAATGGACCACTTAAAGTGGGTGGTAG
+TTGTGTTTTAAGCGGACACAATCTTGCTAAACACTGTCTTCATGTTGTCGGCCCAAATGTTAACAAAGGT
+GAAGACATTCAACTTCTTAAGAGTGCTTATGAAAATTTTAATCAGCACGAAGTTCTACTTGCACCATTAT
+TATCAGCTGGTATTTTTGGTGCTGACCCTATACATTCTTTAAGAGTTTGTGTAGATACTGTTCGCACAAA
+TGTCTACTTAGCTGTCTTTGATAAAAATCTCTATGACAAACTTGTTTCAAGCTTTTTGGAAATGAAGAGT
+GAAAAGCAAGTTGAACAAAAGATCGCTGAGATTCCTAAAGAGGAAGTTAAGCCATTTATAACTGAAAGTA
+AACCTTCAGTTGAACAGAGAAAACAAGATGATAAGAAAATCAAAGCTTGTGTTGAAGAAGTTACAACAAC
+TCTGGAAGAAACTAAGTTCCTCACAGAAAACTTGTTACTTTATATTGACATTAATGGCAATCTTCATCCA
+GATTCTGCCACTCTTGTTAGTGACATTGACATCACTTTCTTAAAGAAAGATGCTCCATATATAGTGGGTG
+ATGTTGTTCAAGAGGGTGTTTTAACTGCTGTGGTTATACCTACTAAAAAGGCTGGTGGCACTACTGAAAT
+GCTAGCGAAAGCTTTGAGAAAAGTGCCAACAGACAATTATATAACCACTTACCCGGGTCAGGGTTTAAAT
+GGTTACACTGTAGAGGAGGCAAAGACAGTGCTTAAAAAGTGTAAAAGTGCCTTTTACATTCTACCATCTA
+TTATCTCTAATGAGAAGCAAGAAATTCTTGGAACTGTTTCTTGGAATTTGCGAGAAATGCTTGCACATGC
+AGAAGAAACACGCAAATTAATGCCTGTCTGTGTGGAAACTAAAGCCATAGTTTCAACTATACAGCGTAAA
+TATAAGGGTATTAAAATACAAGAGGGTGTGGTTGATTATGGTGCTAGATTTTACTTTTACACCAGTAAAA
+CAACTGTAGCGTCACTTATCAACACACTTAACGATCTAAATGAAACTCTTGTTACAATGCCACTTGGCTA
+TGTAACACATGGCTTAAATTTGGAAGAAGCTGCTCGGTATATGAGATCTCTCAAAGTGCCAGCTACAGTT
+TCTGTTTCTTCACCTGATGCTGTTACAGCGTATAATGGTTATCTTACTTCTTCTTCTAAAACACCTGAAG
+AACATTTTATTGAAACCATCTCACTTGCTGGTTCCTATAAAGATTGGTCCTATTCTGGACAATCTACACA
+ACTAGGTATAGAATTTCTTAAGAGAGGTGATAAAAGTGTATATTACACTAGTAATCCTACCACATTCCAC
+CTAGATGGTGAAGTTATCACCTTTGACAATCTTAAGACACTTCTTTCTTTGAGAGAAGTGAGGACTATTA
+AGGTGTTTACAACAGTAGACAACATTAACCTCCACACGCAAGTTGTGGACATGTCAATGACATATGGACA
+ACAGTTTGGTCCAACTTATTTGGATGGAGCTGATGTTACTAAAATAAAACCTCATAATTCACATGAAGGT
+AAAACATTTTATGTTTTACCTAATGATGACACTCTACGTGTTGAGGCTTTTGAGTACTACCACACAACTG
+ATCCTAGTTTTCTGGGTAGGTACATGTCAGCATTAAATCACACTAAAAAGTGGAAATACCCACAAGTTAA
+TGGTTTAACTTCTATTAAATGGGCAGATAACAACTGTTATCTTGCCACTGCATTGTTAACACTCCAACAA
+ATAGAGTTGAAGTTTAATCCACCTGCTCTACAAGATGCTTATTACAGAGCAAGGGCTGGTGAAGCTGCTA
+ACTTTTGTGCACTTATCTTAGCCTACTGTAATAAGACAGTAGGTGAGTTAGGTGATGTTAGAGAAACAAT
+GAGTTACTTGTTTCAACATGCCAATTTAGATTCTTGCAAAAGAGTCTTGAACGTGGTGTGTAAAACTTGT
+GGACAACAGCAGACAACCCTTAAGGGTGTAGAAGCTGTTATGTACATGGGCACACTTTCTTATGAACAAT
+TTAAGAAAGGTGTTCAGATACCTTGTACGTGTGGTAAACAAGCTACAAAATATCTAGTACAACAGGAGTC
+ACCTTTTGTTATGATGTCAGCACCACCTGCTCAGTATGAACTTAAGCATGGTACATTTACTTGTGCTAGT
+GAGTACACTGGTAATTACCAGTGTGGTCACTATAAACATATAACTTCTAAAGAAACTTTGTATTGCATAG
+ACGGTGCTTTACTTACAAAGTCCTCAGAATACAAAGGTCCTATTACGGATGTTTTCTACAAAGAAAACAG
+TTACACAACAACCATAAAACCAGTTACTTATAAATTGGATGGTGTTGTTTGTACAGAAATTGACCCTAAG
+TTGGACAATTATTATAAGAAAGACAATTCTTATTTCACAGAGCAACCAATTGATCTTGTACCAAACCAAC
+CATATCCAAACGCAAGCTTCGATAATTTTAAGTTTGTATGTGATAATATCAAATTTGCTGATGATTTAAA
+CCAGTTAACTGGTTATAAGAAACCTGCTTCAAGAGAGCTTAAAGTTACATTTTTCCCTGACTTAAATGGT
+GATGTGGTGGCTATTGATTATAAACACTACACACCCTCTTTTAAGAAAGGAGCTAAATTGTTACATAAAC
+CTATTGTTTGGCATGTTAACAATGCAACTAATAAAGCCACGTATAAACCAAATACCTGGTGTATACGTTG
+TCTTTGGAGCACAAAACCAGTTGAAACATCAAATTCGTTTGATGTACTGAAGTCAGAGGACGCGCAGGGA
+ATGGATAATCTTGCCTGCGAAGATCTAAAACCAGTCTCTGAAGAAGTAGTGGAAAATCCTACCATACAGA
+AAGACGTTCTTGAGTGTAATGTGAAAACTACCGAAGTTGTAGGAGACATTATACTTAAACCAGCAAATAA
+TAGTTTAAAAATTACAGAAGAGGTTGGCCACACAGATCTAATGGCTGCTTATGTAGACAATTCTAGTCTT
+ACTATTAAGAAACCTAATGAATTATCTAGAGTATTAGGTTTGAAAACCCTTGCTACTCATGGTTTAGCTG
+CTGTTAATAGTGTCCCTTGGGATACTATAGCTAATTATGCTAAGCCTTTTCTTAACAAAGTTGTTAGTAC
+AACTACTAACATAGTTACACGGTGTTTAAACCGTGTTTGTACTAATTATATGCCTTATTTCTTTACTTTA
+TTGCTACAATTGTGTACTTTTACTAGAAGTACAAATTCTAGAATTAAAGCATCTATGCCGACTACTATAG
+CAAAGAATACTGTTAAGAGTGTCGGTAAATTTTGTCTAGAGGCTTCATTTAATTATTTGAAGTCACCTAA
+TTTTTCTAAACTGATAAATATTATAATTTGGTTTTTACTATTAAGTGTTTGCCTAGGTTCTTTAATCTAC
+TCAACCGCTGCTTTAGGTGTTTTAATGTCTAATTTAGGCATGCCTTCTTACTGTACTGGTTACAGAGAAG
+GCTATTTGAACTCTACTAATGTCACTATTGCAACCTACTGTACTGGTTCTATACCTTGTAGTGTTTGTCT
+TAGTGGTTTAGATTCTTTAGACACCTATCCTTCTTTAGAAACTATACAAATTACCATTTCATCTTTTAAA
+TGGGATTTAACTGCTTTTGGCTTAGTTGCAGAGTGGTTTTTGGCATATATTCTTTTCACTAGGTTTTTCT
+ATGTACTTGGATTGGCTGCAATCATGCAATTGTTTTTCAGCTATTTTGCAGTACATTTTATTAGTAATTC
+TTGGCTTATGTGGTTAATAATTAATCTTGTACAAATGGCCCCGATTTCAGCTATGGTTAGAATGTACATC
+TTCTTTGCATCATTTTATTATGTATGGAAAAGTTATGTGCATGTTGTAGACGGTTGTAATTCATCAACTT
+GTATGATGTGTTACAAACGTAATAGAGCAACAAGAGTCGAATGTACAACTATTGTTAATGGTGTTAGAAG
+GTCCTTTTATGTCTATGCTAATGGAGGTAAAGGCTTTTGCAAACTACACAATTGGAATTGTGTTAATTGT
+GATACATTCTGTGCTGGTAGTACATTTATTAGTGATGAAGTTGCGAGAGACTTGTCACTACAGTTTAAAA
+GACCAATAAATCCTACTGACCAGTCTTCTTACATCGTTGATAGTGTTACAGTGAAGAATGGTTCCATCCA
+TCTTTACTTTGATAAAGCTGGTCAAAAGACTTATGAAAGACATTCTCTCTCTCATTTTGTTAACTTAGAC
+AACCTGAGAGCTAATAACACTAAAGGTTCATTGCCTATTAATGTTATAGTTTTTGATGGTAAATCAAAAT
+GTGAAGAATCATCTGCAAAATCAGCGTCTGTTTACTACAGTCAGCTTATGTGTCAACCTATACTGTTACT
+AGATCAGGCATTAGTGTCTGATGTTGGTGATAGTGCGGAAGTTGCAGTTAAAATGTTTGATGCTTACGTT
+AATACGTTTTCATCAACTTTTAACGTACCAATGGAAAAACTCAAAACACTAGTTGCAACTGCAGAAGCTG
+AACTTGCAAAGAATGTGTCCTTAGACAATGTCTTATCTACTTTTATTTCAGCAGCTCGGCAAGGGTTTGT
+TGATTCAGATGTAGAAACTAAAGATGTTGTTGAATGTCTTAAATTGTCACATCAATCTGACATAGAAGTT
+ACTGGCGATAGTTGTAATAACTATATGCTCACCTATAACAAAGTTGAAAACATGACACCCCGTGACCTTG
+GTGCTTGTATTGACTGTAGTGCGCGTCATATTAATGCGCAGGTAGCAAAAAGTCACAACATTGCTTTGAT
+ATGGAACGTTAAAGATTTCATGTCATTGTCTGAACAACTACGAAAACAAATACGTAGTGCTGCTAAAAAG
+AATAACTTACCTTTTAAGTTGACATGTGCAACTACTAGACAAGTTGTTAATGTTGTAACAACAAAGATAG
+CACTTAAGGGTGGTAAAATTGTTAATAATTGGTTGAAGCAGTTAATTAAAGTTACACTTGTGTTCCTTTT
+TGTTGCTGCTATTTTCTATTTAATAACACCTGTTCATGTCATGTCTAAACATACTGACTTTTCAAGTGAA
+ATCATAGGATACAAGGCTATTGATGGTGGTGTCACTCGTGACATAGCATCTACAGATACTTGTTTTGCTA
+ACAAACATGCTGATTTTGACACATGGTTTAGCCAGCGTGGTGGTAGTTATACTAATGACAAAGCTTGCCC
+ATTGATTGCTGCAGTCATAACAAGAGAAGTGGGTTTTGTCGTGCCTGGTTTGCCTGGCACGATATTACGC
+ACAACTAATGGTGACTTTTTGCATTTCTTACCTAGAGTTTTTAGTGCAGTTGGTAACATCTGTTACACAC
+CATCAAAACTTATAGAGTACACTGACTTTGCAACATCAGCTTGTGTTTTGGCTGCTGAATGTACAATTTT
+TAAAGATGCTTCTGGTAAGCCAGTACCATATTGTTATGATACCAATGTACTAGAAGGTTCTGTTGCTTAT
+GAAAGTTTACGCCCTGACACACGTTATGTGCTCATGGATGGCTCTATTATTCAATTTCCTAACACCTACC
+TTGAAGGTTCTGTTAGAGTGGTAACAACTTTTGATTCTGAGTACTGTAGGCACGGCACTTGTGAAAGATC
+AGAAGCTGGTGTTTGTGTATCTACTAGTGGTAGATGGGTACTTAACAATGATTATTACAGATCTTTACCA
+GGAGTTTTCTGTGGTGTAGATGCTGTAAATTTACTTACTAATATGTTTACACCACTAATTCAACCTATTG
+GTGCTTTGGACATATCAGCATCTATAGTAGCTGGTGGTATTGTAGCTATCGTAGTAACATGCCTTGCCTA
+CTATTTTATGAGGTTTAGAAGAGCTTTTGGTGAATACAGTCATGTAGTTGCCTTTAATACTTTACTATTC
+CTTATGTCATTCACTGTACTCTGTTTAACACCAGTTTACTCATTCTTACCTGGTGTTTATTCTGTTATTT
+ACTTGTACTTGACATTTTATCTTACTAATGATGTTTCTTTTTTAGCACATATTCAGTGGATGGTTATGTT
+CACACCTTTAGTACCTTTCTGGATAACAATTGCTTATATCATTTGTATTTCCACAAAGCATTTCTATTGG
+TTCTTTAGTAATTACCTAAAGAGACGTGTAGTCTTTAATGGTGTTTCCTTTAGTACTTTTGAAGAAGCTG
+CGCTGTGCACCTTTTTGTTAAATAAAGAAATGTATCTAAAGTTGCGTAGTGATGTGCTATTACCTCTTAC
+GCAATATAATAGATACTTAGCTCTTTATAATAAGTACAAGTATTTTAGTGGAGCAATGGATACAACTAGC
+TACAGAGAAGCTGCTTGTTGTCATCTCGCAAAGGCTCTCAATGACTTCAGTAACTCAGGTTCTGATGTTC
+TTTACCAACCACCACAAACCTCTATCACCTCAGCTGTTTTGCAGAGTGGTTTTAGAAAAATGGCATTCCC
+ATCTGGTAAAGTTGAGGGTTGTATGGTACAAGTAACTTGTGGTACAACTACACTTAACGGTCTTTGGCTT
+GATGACGTAGTTTACTGTCCAAGACATGTGATCTGCACCTCTGAAGACATGCTTAACCCTAATTATGAAG
+ATTTACTCATTCGTAAGTCTAATCATAATTTCTTGGTACAGGCTGGTAATGTTCAACTCAGGGTTATTGG
+ACATTCTATGCAAAATTGTGTACTTAAGCTTAAGGTTGATACAGCCAATCCTAAGACACCTAAGTATAAG
+TTTGTTCGCATTCAACCAGGACAGACTTTTTCAGTGTTAGCTTGTTACAATGGTTCACCATCTGGTGTTT
+ACCAATGTGCTATGAGGCCCAATTTCACTATTAAGGGTTCATTCCTTAATGGTTCATGTGGTAGTGTTGG
+TTTTAACATAGATTATGACTGTGTCTCTTTTTGTTACATGCACCATATGGAATTACCAACTGGAGTTCAT
+GCTGGCACAGACTTAGAAGGTAACTTTTATGGACCTTTTGTTGACAGGCAAACAGCACAAGCAGCTGGTA
+CGGACACAACTATTACAGTTAATGTTTTAGCTTGGTTGTACGCTGCTGTTATAAATGGAGACAGGTGGTT
+TCTCAATCGATTTACCACAACTCTTAATGACTTTAACCTTGTGGCTATGAAGTACAATTATGAACCTCTA
+ACACAAGACCATGTTGACATACTAGGACCTCTTTCTGCTCAAACTGGAATTGCCGTTTTAGATATGTGTG
+CTTCATTAAAAGAATTACTGCAAAATGGTATGAATGGACGTACCATATTGGGTAGTGCTTTATTAGAAGA
+TGAATTTACACCTTTTGATGTTGTTAGACAATGCTCAGGTGTTACTTTCCAAAGTGCAGTGAAAAGAACA
+ATCAAGGGTACACACCACTGGTTGTTACTCACAATTTTGACTTCACTTTTAGTTTTAGTCCAGAGTACTC
+AATGGTCTTTGTTCTTTTTTTTGTATGAAAATGCCTTTTTACCTTTTGCTATGGGTATTATTGCTATGTC
+TGCTTTTGCAATGATGTTTGTCAAACATAAGCATGCATTTCTCTGTTTGTTTTTGTTACCTTCTCTTGCC
+ACTGTAGCTTATTTTAATATGGTCTATATGCCTGCTAGTTGGGTGATGCGTATTATGACATGGTTGGATA
+TGGTTGATACTAGTTTGTCTGGTTTTAAGCTAAAAGACTGTGTTATGTATGCATCAGCTGTAGTGTTACT
+AATCCTTATGACAGCAAGAACTGTGTATGATGATGGTGCTAGGAGAGTGTGGACACTTATGAATGTCTTG
+ACACTCGTTTATAAAGTTTATTATGGTAATGCTTTAGATCAAGCCATTTCCATGTGGGCTCTTATAATCT
+CTGTTACTTCTAACTACTCAGGTGTAGTTACAACTGTCATGTTTTTGGCCAGAGGTATTGTTTTTATGTG
+TGTTGAGTATTGCCCTATTTTCTTCATAACTGGTAATACACTTCAGTGTATAATGCTAGTTTATTGTTTC
+TTAGGCTATTTTTGTACTTGTTACTTTGGCCTCTTTTGTTTACTCAACCGCTACTTTAGACTGACTCTTG
+GTGTTTATGATTACTTAGTTTCTACACAGGAGTTTAGATATATGAATTCACAGGGACTACTCCCACCCAA
+GAATAGCATAGATGCCTTCAAACTCAACATTAAATTGTTGGGTGTTGGTGGCAAACCTTGTATCAAAGTA
+GCCACTGTACAGTCTAAAATGTCAGATGTAAAGTGCACATCAGTAGTCTTACTCTCAGTTTTGCAACAAC
+TCAGAGTAGAATCATCATCTAAATTGTGGGCTCAATGTGTCCAGTTACACAATGACATTCTCTTAGCTAA
+AGATACTACTGAAGCCTTTGAAAAAATGGTTTCACTACTTTCTGTTTTGCTTTCCATGCAGGGTGCTGTA
+GACATAAACAAGCTTTGTGAAGAAATGCTGGACAACAGGGCAACCTTACAAGCTATAGCCTCAGAGTTTA
+GTTCCCTTCCATCATATGCAGCTTTTGCTACTGCTCAAGAAGCTTATGAGCAGGCTGTTGCTAATGGTGA
+TTCTGAAGTTGTTCTTAAAAAGTTGAAGAAGTCTTTGAATGTGGCTAAATCTGAATTTGACCGTGATGCA
+GCCATGCAACGTAAGTTGGAAAAGATGGCTGATCAAGCTATGACCCAAATGTATAAACAGGCTAGATCTG
+AGGACAAGAGGGCAAAAGTTACTAGTGCTATGCAGACAATGCTTTTCACTATGCTTAGAAAGTTGGATAA
+TGATGCACTCAACAACATTATCAACAATGCAAGAGATGGTTGTGTTCCCTTGAACATAATACCTCTTACA
+ACAGCAGCCAAACTAATGGTTGTCATACCAGACTATAACACATATAAAAATACGTGTGATGGTACAACAT
+TTACTTATGCATCAGCATTGTGGGAAATCCAACAGGTTGTAGATGCAGATAGTAAAATTGTTCAACTTAG
+TGAAATTAGTATGGACAATTCACCTAATTTAGCATGGCCTCTTATTGTAACAGCTTTAAGGGCCAATTCT
+GCTGTCAAATTACAGAATAATGAGCTTAGTCCTGTTGCACTACGACAGATGTCTTGTGCTGCCGGTACTA
+CACAAACTGCTTGCACTGATGACAATGCGTTAGCTTACTACAACACAACAAAGGGAGGTAGGTTTGTACT
+TGCACTGTTATCCGATTTACAGGATTTGAAATGGGCTAGATTCCCTAAGAGTGATGGAACTGGTACTATC
+TATACAGAACTGGAACCACCTTGTAGGTTTGTTACAGACACACCTAAAGGTCCTAAAGTGAAGTATTTAT
+ACTTTATTAAAGGATTAAACAACCTAAATAGAGGTATGGTACTTGGTAGTTTAGCTGCCACAGTACGTCT
+ACAAGCTGGTAATGCAACAGAAGTGCCTGCCAATTCAACTGTATTATCTTTCTGTGCTTTTGCTGTAGAT
+GCTGCTAAAGCTTACAAAGATTATCTAGCTAGTGGGGGACAACCAATCACTAATTGTGTTAAGATGTTGT
+GTACACACACTGGTACTGGTCAGGCAATAACAGTTACACCGGAAGCCAATATGGATCAAGAATCCTTTGG
+TGGTGCATCGTGTTGTCTGTACTGCCGTTGCCACATAGATCATCCAAATCCTAAAGGATTTTGTGACTTA
+AAAGGTAAGTATGTACAAATACCTACAACTTGTGCTAATGACCCTGTGGGTTTTACACTTAAAAACACAG
+TCTGTACCGTCTGCGGTATGTGGAAAGGTTATGGCTGTAGTTGTGATCAACTCCGCGAACCCATGCTTCA
+GTCAGCTGATGCACAATCGTTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCA
+CAGGCACTAGTACTGATGTCGTATACAGGGCTTTTGACATCTACAATGATAAAGTAGCTGGTTTTGCTAA
+ATTCCTAAAAACTAATTGTTGTCGCTTCCAAGAAAAGGACGAAGATGACAATTTAATTGATTCTTACTTT
+GTAGTTAAGAGACACACTTTCTCTAACTACCAACATGAAGAAACAATTTATAATTTACTTAAGGATTGTC
+CAGCTGTTGCTAAACATGACTTCTTTAAGTTTAGAATAGACGGTGACATGGTACCACATATATCACGTCA
+ACGTCTTACTAAATACACAATGGCAGACCTCGTCTATGCTTTAAGGCATTTTGATGAAGGTAATTGTGAC
+ACATTAAAAGAAATACTTGTCACATACAATTGTTGTGATGATGATTATTTCAATAAAAAGGACTGGTATG
+ATTTTGTAGAAAACCCAGATATATTACGCGTATACGCCAACTTAGGTGAACGTGTACGCCAAGCTTTGTT
+AAAAACAGTACAATTCTGTGATGCCATGCGAAATGCTGGTATTGTTGGTGTACTGACATTAGATAATCAA
+GATCTCAATGGTAACTGGTATGATTTCGGTGATTTCATACAAACCACGCCAGGTAGTGGAGTTCCTGTTG
+TAGATTCTTATTATTCATTGTTAATGCCTATATTAACCTTGACCAGGGCTTTAACTGCAGAGTCACATGT
+TGACACTGACTTAACAAAGCCTTACATTAAGTGGGATTTGTTAAAATATGACTTCACGGAAGAGAGGTTA
+AAACTCTTTGACCGTTATTTTAAATATTGGGATCAGACATACCACCCAAATTGTGTTAACTGTTTGGATG
+ACAGATGCATTCTGCATTGTGCAAACTTTAATGTTTTATTCTCTACAGTGTTCCCACCTACAAGTTTTGG
+ACCACTAGTGAGAAAAATATTTGTTGATGGTGTTCCATTTGTAGTTTCAACTGGATACCACTTCAGAGAG
+CTAGGTGTTGTACATAATCAGGATGTAAACTTACATAGCTCTAGACTTAGTTTTAAGGAATTACTTGTGT
+ATGCTGCTGACCCTGCTATGCACGCTGCTTCTGGTAATCTATTACTAGATAAACGCACTACGTGCTTTTC
+AGTAGCTGCACTTACTAACAATGTTGCTTTTCAAACTGTCAAACCCGGTAATTTTAACAAAGACTTCTAT
+GACTTTGCTGTGTCTAAGGGTTTCTTTAAGGAAGGAAGTTCTGTTGAATTAAAACACTTCTTCTTTGCTC
+AGGATGGTAATGCTGCTATCAGCGATTATGACTACTATCGTTATAATCTACCAACAATGTGTGATATCAG
+ACAACTACTATTTGTAGTTGAAGTTGTTGATAAGTACTTTGATTGTTACGATGGTGGCTGTATTAATGCT
+AACCAAGTCATCGTCAACAACCTAGACAAATCAGCTGGTTTTCCATTTAATAAATGGGGTAAGGCTAGAC
+TTTATTATGATTCAATGAGTTATGAGGATCAAGATGCACTTTTCGCATATACAAAACGTAATGTCATCCC
+TACTATAACTCAAATGAATCTTAAGTATGCCATTAGTGCAAAGAATAGAGCTCGCACCGTAGCTGGTGTC
+TCTATCTGTAGTACTATGACCAATAGACAGTTTCATCAAAAATTATTGAAATCAATAGCCGCCACTAGAG
+GAGCTACTGTAGTAATTGGAACAAGCAAATTCTATGGTGGTTGGCACAACATGTTAAAAACTGTTTATAG
+TGATGTAGAAAACCCTCACCTTATGGGTTGGGATTATCCTAAATGTGATAGAGCCATGCCTAACATGCTT
+AGAATTATGGCCTCACTTGTTCTTGCTCGCAAACATACAACGTGTTGTAGCTTGTCACACCGTTTCTATA
+GATTAGCTAATGAGTGTGCTCAAGTATTGAGTGAAATGGTCATGTGTGGCGGTTCACTATATGTTAAACC
+AGGTGGAACCTCATCAGGAGATGCCACAACTGCTTATGCTAATAGTGTTTTTAACATTTGTCAAGCTGTC
+ACGGCCAATGTTAATGCACTTTTATCTACTGATGGTAACAAAATTGCCGATAAGTATGTCCGCAATTTAC
+AACACAGACTTTATGAGTGTCTCTATAGAAATAGAGATGTTGACACAGACTTTGTGAATGAGTTTTACGC
+ATATTTGCGTAAACATTTCTCAATGATGATACTCTCTGACGATGCTGTTGTGTGTTTCAATAGCACTTAT
+GCATCTCAAGGTCTAGTGGCTAGCATAAAGAACTTTAAGTCAGTTCTTTATTATCAAAACAATGTTTTTA
+TGTCTGAAGCAAAATGTTGGACTGAGACTGACCTTACTAAAGGACCTCATGAATTTTGCTCTCAACATAC
+AATGCTAGTTAAACAGGGTGATGATTATGTGTACCTTCCTTACCCAGATCCATCAAGAATCCTAGGGGCC
+GGCTGTTTTGTAGATGATATCGTAAAAACAGATGGTACACTTATGATTGAACGGTTCGTGTCTTTAGCTA
+TAGATGCTTACCCACTTACTAAACATCCTAATCAGGAGTATGCTGATGTCTTTCATTTGTACTTACAATA
+CATAAGAAAGCTACATGATGAGTTAACAGGACACATGTTAGACATGTATTCTGTTATGCTTACTAATGAT
+AACACTTCAAGGTATTGGGAACCTGAGTTTTATGAGGCTATGTACACACCGCATACAGTCTTACAGGCTG
+TTGGGGCTTGTGTTCTTTGCAATTCACAGACTTCATTAAGATGTGGTGCTTGCATACGTAGACCATTCTT
+ATGTTGTAAATGCTGTTACGACCATGTCATATCAACATCACATAAATTAGTCTTGTCTGTTAATCCGTAT
+GTTTGCAATGCTCCAGGTTGTGATGTCACAGATGTGACTCAACTTTACTTAGGAGGTATGAGCTATTATT
+GTAAATCACATAAACCACCCATTAGTTTTCCATTGTGTGCTAATGGACAAGTTTTTGGTTTATATAAAAA
+TACATGTGTTGGTAGCGATAATGTTACTGACTTTAATGCAATTGCAACATGTGACTGGACAAATGCTGGT
+GATTACATTTTAGCTAACACCTGTACTGAAAGACTCAAGCTTTTTGCAGCAGAAACGCTCAAAGCTACTG
+AGGAGACATTTAAACTGTCTTATGGTATTGCTACTGTACGTGAAGTGCTGTCTGACAGAGAATTACATCT
+TTCATGGGAAGTTGGTAAACCTAGACCACCACTTAACCGAAATTATGTCTTTACTGGTTATCGTGTAACT
+AAAAACAGTAAAGTACAAATAGGAGAGTACACCTTTGAAAAAGGTGACTATGGTGATGCTGTTGTTTACC
+GAGGTACAACAACTTACAAATTAAATGTTGGTGATTATTTTGTGCTGACATCACATACAGTAATGCCATT
+AAGTGCACCTACACTAGTGCCACAAGAGCACTATGTTAGAATTACTGGCTTATACCCAACACTCAATATC
+TCAGATGAGTTTTCTAGCAATGTTGCAAATTATCAAAAGGTTGGTATGCAAAAGTATTCTACACTCCAGG
+GACCACCTGGTACTGGTAAGAGTCATTTTGCTATTGGCCTAGCTCTCTACTACCCTTCTGCTCGCATAGT
+GTATACAGCTTGCTCTCATGCCGCTGTTGATGCACTATGTGAGAAGGCATTAAAATATTTGCCTATAGAT
+AAATGTAGTAGAATTATACCTGCACGTGCTCGTGTAGAGTGTTTTGATAAATTCAAAGTGAATTCAACAT
+TAGAACAGTATGTCTTTTGTACTGTAAATGCATTGCCTGAGACGACAGCAGATATAGTTGTCTTTGATGA
+AATTTCAATGGCCACAAATTATGATTTGAGTGTTGTCAATGCCAGATTACGTGCTAAGCACTATGTGTAC
+ATTGGCGACCCTGCTCAATTACCTGCACCACGCACATTGCTAACTAAGGGCACACTAGAACCAGAATATT
+TCAATTCAGTGTGTAGACTTATGAAAACTATAGGTCCAGACATGTTCCTCGGAACTTGTCGGCGTTGTCC
+TGCTGAAATTGTTGACACTGTGAGTGCTTTGGTTTATGATAATAAGCTTAAAGCACATAAAGACAAATCA
+GCTCAATGCTTTAAAATGTTTTATAAGGGTGTTATCACGCATGATGTTTCATCTGCAATTAACAGGCCAC
+AAATAGGCGTGGTAAGAGAATTCCTTACACGTAACCCTGCTTGGAGAAAAGCTGTCTTTATTTCACCTTA
+TAATTCACAGAATGCTGTAGCCTCAAAGATTTTGGGACTACCAACTCAAACTGTTGATTCATCACAGGGC
+TCAGAATATGACTATGTCATATTCACTCAAACCACTGAAACAGCTCACTCTTGTAATGTAAACAGATTTA
+ATGTTGCTATTACCAGAGCAAAAGTAGGCATACTTTGCATAATGTCTGATAGAGACCTTTATGACAAGTT
+GCAATTTACAAGTCTTGAAATTCCACGTAGGAATGTGGCAACTTTACAAGCTGAAAATGTAACAGGACTC
+TTTAAAGATTGTAGTAAGGTAATCACTGGGTTACATCCTACACAGGCACCTACACACCTCAGTGTTGACA
+CTAAATTCAAAACTGAAGGTTTATGTGTTGACATACCTGGCATACCTAAGGACATGACCTATAGAAGACT
+CATCTCTATGATGGGTTTTAAAATGAATTATCAAGTTAATGGTTACCCTAACATGTTTATCACCCGCGAA
+GAAGCTATAAGACATGTACGTGCATGGATTGGCTTCGATGTCGAGGGGTGTCATGCTACTAGAGAAGCTG
+TTGGTACCAATTTACCTTTACAGCTAGGTTTTTCTACAGGTGTTAACCTAGTTGCTGTACCTACAGGTTA
+TGTTGATACACCTAATAATACAGATTTTTCCAGAGTTAGTGCTAAACCACCGCCTGGAGATCAATTTAAA
+CACCTCATACCACTTATGTACAAAGGACTTCCTTGGAATGTAGTGCGTATAAAGATTGTACAAATGTTAA
+GTGACACACTTAAAAATCTCTCTGACAGAGTCGTATTTGTCTTATGGGCACATGGCTTTGAGTTGACATC
+TATGAAGTATTTTGTGAAAATAGGACCTGAGCGCACCTGTTGTCTATGTGATAGACGTGCCACATGCTTT
+TCCACTGCTTCAGACACTTATGCCTGTTGGCATCATTCTATTGGATTTGATTACGTCTATAATCCGTTTA
+TGATTGATGTTCAACAATGGGGTTTTACAGGTAACCTACAAAGCAACCATGATCTGTATTGTCAAGTCCA
+TGGTAATGCACATGTAGCTAGTTGTGATGCAATCATGACTAGGTGTCTAGCTGTCCACGAGTGCTTTGTT
+AAGCGTGTTGACTGGACTATTGAATATCCTATAATTGGTGATGAACTGAAGATTAATGCGGCTTGTAGAA
+AGGTTCAACACATGGTTGTTAAAGCTGCATTATTAGCAGACAAATTCCCAGTTCTTCACGACATTGGTAA
+CCCTAAAGCTATTAAGTGTGTACCTCAAGCTGATGTAGAATGGAAGTTCTATGATGCACAGCCTTGTAGT
+GACAAAGCTTATAAAATAGAAGAATTATTCTATTCTTATGCCACACATTCTGACAAATTCACAGATGGTG
+TATGCCTATTTTGGAATTGCAATGTCGATAGATATCCTGCTAATTCCATTGTTTGTAGATTTGACACTAG
+AGTGCTATCTAACCTTAACTTGCCTGGTTGTGATGGTGGCAGTTTGTATGTAAATAAACATGCATTCCAC
+ACACCAGCTTTTGATAAAAGTGCTTTTGTTAATTTAAAACAATTACCATTTTTCTATTACTCTGACAGTC
+CATGTGAGTCTCATGGAAAACAAGTAGTGTCAGATATAGATTATGTACCACTAAAGTCTGCTACGTGTAT
+AACACGTTGCAATTTAGGTGGTGCTGTCTGTAGACATCATGCTAATGAGTACAGATTGTATCTCGATGCT
+TATAACATGATGATCTCAGCTGGCTTTAGCTTGTGGGTTTACAAACAATTTGATACTTATAACCTCTGGA
+ACACTTTTACAAGACTTCAGAGTTTAGAAAATGTGGCTTTTAATGTTGTAAATAAGGGACACTTTGATGG
+ACAACAGGGTGAAGTACCAGTTTCTATCATTAATAACACTGTTTACACAAAAGTTGATGGTGTTGATGTA
+GAATTGTTTGAAAATAAAACAACATTACCTGTTAATGTAGCATTTGAGCTTTGGGCTAAGCGCAACATTA
+AACCAGTACCAGAGGTGAAAATACTCAATAATTTGGGTGTGGACATTGCTGCTAATACTGTGATCTGGGA
+CTACAAAAGAGATGCTCCAGCACATATATCTACTATTGGTGTTTGTTCTATGACTGACATAGCCAAGAAA
+CCAACTGAAACGATTTGTGCACCACTCACTGTCTTTTTTGATGGTAGAGTTGATGGTCAAGTAGACTTAT
+TTAGAAATGCCCGTAATGGTGTTCTTATTACAGAAGGTAGTGTTAAAGGTTTACAACCATCTGTAGGTCC
+CAAACAAGCTAGTCTTAATGGAGTCACATTAATTGGAGAAGCCGTAAAAACACAGTTCAATTATTATAAG
+AAAGTTGATGGTGTTGTCCAACAATTACCTGAAACTTACTTTACTCAGAGTAGAAATTTACAAGAATTTA
+AACCCAGGAGTCAAATGGAAATTGATTTCTTAGAATTAGCTATGGATGAATTCATTGAACGGTATAAATT
+AGAAGGCTATGCCTTCGAACATATCGTTTATGGAGATTTTAGTCATAGTCAGTTAGGTGGTTTACATCTA
+CTGATTGGACTAGCTAAACGTTTTAAGGAATCACCTTTTGAATTAGAAGATTTTATTCCTATGGACAGTA
+CAGTTAAAAACTATTTCATAACAGATGCGCAAACAGGTTCATCTAAGTGTGTGTGTTCTGTTATTGATTT
+ATTACTTGATGATTTTGTTGAAATAATAAAATCCCAAGATTTATCTGTAGTTTCTAAGGTTGTCAAAGTG
+ACTATTGACTATACAGAAATTTCATTTATGCTTTGGTGTAAAGATGGCCATGTAGAAACATTTTACCCAA
+AATTACAATCTAGTCAAGCGTGGCAACCGGGTGTTGCTATGCCTAATCTTTACAAAATGCAAAGAATGCT
+ATTAGAAAAGTGTGACCTTCAAAATTATGGTGATAGTGCAACATTACCTAAAGGCATAATGATGAATGTC
+GCAAAATATACTCAACTGTGTCAATATTTAAACACATTAACATTAGCTGTACCCTATAATATGAGAGTTA
+TACATTTTGGTGCTGGTTCTGATAAAGGAGTTGCACCAGGTACAGCTGTTTTAAGACAGTGGTTGCCTAC
+GGGTACGCTGCTTGTCGATTCAGATCTTAATGACTTTGTCTCTGATGCAGATTCAACTTTGATTGGTGAT
+TGTGCAACTGTACATACAGCTAATAAATGGGATCTCATTATTAGTGATATGTACGACCCTAAGACTAAAA
+ATGTTACAAAAGAAAATGACTCTAAAGAGGGTTTTTTCACTTACATTTGTGGGTTTATACAACAAAAGCT
+AGCTCTTGGAGGTTCCGTGGCTATAAAGATAACAGAACATTCTTGGAATGCTGATCTTTATAAGCTCATG
+GGACACTTCGCATGGTGGACAGCCTTTGTTACTAATGTGAATGCGTCATCATCTGAAGCATTTTTAATTG
+GATGTAATTATCTTGGCAAACCACGCGAACAAATAGATGGTTATGTCATGCATGCAAATTACATATTTTG
+GAGGAATACAAATCCAATTCAGTTGTCTTCCTATTCTTTATTTGACATGAGTAAATTTCCCCTTAAATTA
+AGGGGTACTGCTGTTATGTCTTTAAAAGAAGGTCAAATCAATGATATGATTTTATCTCTTCTTAGTAAAG
+GTAGACTTATAATTAGAGAAAACAACAGAGTTGTTATTTCTAGTGATGTTCTTGTTAACAACTAAACGAA
+CAATGTTTGTTTTTCTTGTTTTATTGCCACTAGTCTCTAGTCAGTGTGTTAATCTTACAACCAGAACTCA
+ATTACCCCCTGCATACACTAATTCTTTCACACGTGGTGTTTATTACCCTGACAAAGTTTTCAGATCCTCA
+GTTTTACATTCAACTCAGGACTTGTTCTTACCTTTCTTTTCCAATGTTACTTGGTTCCATGCTATACATG
+TCTCTGGGACCAATGGTACTAAGAGGTTTGATAACCCTGTCCTACCATTTAATGATGGTGTTTATTTTGC
+TTCCACTGAGAAGTCTAACATAATAAGAGGCTGGATTTTTGGTACTACTTTAGATTCGAAGACCCAGTCC
+CTACTTATTGTTAATAACGCTACTAATGTTGTTATTAAAGTCTGTGAATTTCAATTTTGTAATGATCCAT
+TTTTGGGTGTTTATTACCACAAAAACAACAAAAGTTGGATGGAAAGTGAGTTCAGAGTTTATTCTAGTGC
+GAATAATTGCACTTTTGAATATGTCTCTCAGCCTTTTCTTATGGACCTTGAAGGAAAACAGGGTAATTTC
+AAAAATCTTAGGGAATTTGTGTTTAAGAATATTGATGGTTATTTTAAAATATATTCTAAGCACACGCCTA
+TTAATTTAGTGCGTGATCTCCCTCAGGGTTTTTCGGCTTTAGAACCATTGGTAGATTTGCCAATAGGTAT
+TAACATCACTAGGTTTCAAACTTTACTTGCTTTACATAGAAGTTATTTGACTCCTGGTGATTCTTCTTCA
+GGTTGGACAGCTGGTGCTGCAGCTTATTATGTGGGTTATCTTCAACCTAGGACTTTTCTATTAAAATATA
+ATGAAAATGGAACCATTACAGATGCTGTAGACTGTGCACTTGACCCTCTCTCAGAAACAAAGTGTACGTT
+GAAATCCTTCACTGTAGAAAAAGGAATCTATCAAACTTCTAACTTTAGAGTCCAACCAACAGAATCTATT
+GTTAGATTTCCTAATATTACAAACTTGTGCCCTTTTGGTGAAGTTTTTAACGCCACCAGATTTGCATCTG
+TTTATGCTTGGAACAGGAAGAGAATCAGCAACTGTGTTGCTGATTATTCTGTCCTATATAATTCCGCATC
+ATTTTCCACTTTTAAGTGTTATGGAGTGTCTCCTACTAAATTAAATGATCTCTGCTTTACTAATGTCTAT
+GCAGATTCATTTGTAATTAGAGGTGATGAAGTCAGACAAATCGCTCCAGGGCAAACTGGAAAGATTGCTG
+ATTATAATTATAAATTACCAGATGATTTTACAGGCTGCGTTATAGCTTGGAATTCTAACAATCTTGATTC
+TAAGGTTGGTGGTAATTATAATTACCTGTATAGATTGTTTAGGAAGTCTAATCTCAAACCTTTTGAGAGA
+GATATTTCAACTGAAATCTATCAGGCCGGTAGCACACCTTGTAATGGTGTTGAAGGTTTTAATTGTTACT
+TTCCTTTACAATCATATGGTTTCCAACCCACTAATGGTGTTGGTTACCAACCATACAGAGTAGTAGTACT
+TTCTTTTGAACTTCTACATGCACCAGCAACTGTTTGTGGACCTAAAAAGTCTACTAATTTGGTTAAAAAC
+AAATGTGTCAATTTCAACTTCAATGGTTTAACAGGCACAGGTGTTCTTACTGAGTCTAACAAAAAGTTTC
+TGCCTTTCCAACAATTTGGCAGAGACATTGCTGACACTACTGATGCTGTCCGTGATCCACAGACACTTGA
+GATTCTTGACATTACACCATGTTCTTTTGGTGGTGTCAGTGTTATAACACCAGGAACAAATACTTCTAAC
+CAGGTTGCTGTTCTTTATCAGGATGTTAACTGCACAGAAGTCCCTGTTGCTATTCATGCAGATCAACTTA
+CTCCTACTTGGCGTGTTTATTCTACAGGTTCTAATGTTTTTCAAACACGTGCAGGCTGTTTAATAGGGGC
+TGAACATGTCAACAACTCATATGAGTGTGACATACCCATTGGTGCAGGTATATGCGCTAGTTATCAGACT
+CAGACTAATTCTCCTCGGCGGGCACGTAGTGTAGCTAGTCAATCCATCATTGCCTACACTATGTCACTTG
+GTGCAGAAAATTCAGTTGCTTACTCTAATAACTCTATTGCCATACCCACAAATTTTACTATTAGTGTTAC
+CACAGAAATTCTACCAGTGTCTATGACCAAGACATCAGTAGATTGTACAATGTACATTTGTGGTGATTCA
+ACTGAATGCAGCAATCTTTTGTTGCAATATGGCAGTTTTTGTACACAATTAAACCGTGCTTTAACTGGAA
+TAGCTGTTGAACAAGACAAAAACACCCAAGAAGTTTTTGCACAAGTCAAACAAATTTACAAAACACCACC
+AATTAAAGATTTTGGTGGTTTTAATTTTTCACAAATATTACCAGATCCATCAAAACCAAGCAAGAGGTCA
+TTTATTGAAGATCTACTTTTCAACAAAGTGACACTTGCAGATGCTGGCTTCATCAAACAATATGGTGATT
+GCCTTGGTGATATTGCTGCTAGAGACCTCATTTGTGCACAAAAGTTTAACGGCCTTACTGTTTTGCCACC
+TTTGCTCACAGATGAAATGATTGCTCAATACACTTCTGCACTGTTAGCGGGTACAATCACTTCTGGTTGG
+ACCTTTGGTGCAGGTGCTGCATTACAAATACCATTTGCTATGCAAATGGCTTATAGGTTTAATGGTATTG
+GAGTTACACAGAATGTTCTCTATGAGAACCAAAAATTGATTGCCAACCAATTTAATAGTGCTATTGGCAA
+AATTCAAGACTCACTTTCTTCCACAGCAAGTGCACTTGGAAAACTTCAAGATGTGGTCAACCAAAATGCA
+CAAGCTTTAAACACGCTTGTTAAACAACTTAGCTCCAATTTTGGTGCAATTTCAAGTGTTTTAAATGATA
+TCCTTTCACGTCTTGACAAAGTTGAGGCTGAAGTGCAAATTGATAGGTTGATCACAGGCAGACTTCAAAG
+TTTGCAGACATATGTGACTCAACAATTAATTAGAGCTGCAGAAATCAGAGCTTCTGCTAATCTTGCTGCT
+ACTAAAATGTCAGAGTGTGTACTTGGACAATCAAAAAGAGTTGATTTTTGTGGAAAGGGCTATCATCTTA
+TGTCCTTCCCTCAGTCAGCACCTCATGGTGTAGTCTTCTTGCATGTGACTTATGTCCCTGCACAAGAAAA
+GAACTTCACAACTGCTCCTGCCATTTGTCATGATGGAAAAGCACACTTTCCTCGTGAAGGTGTCTTTGTT
+TCAAATGGCACACACTGGTTTGTAACACAAAGGAATTTTTATGAACCACAAATCATTACTACAGACAACA
+CATTTGTGTCTGGTAACTGTGATGTTGTAATAGGAATTGTCAACAACACAGTTTATGATCCTTTGCAACC
+TGAATTAGACTCATTCAAGGAGGAGTTAGATAAATATTTTAAGAATCATACATCACCAGATGTTGATTTA
+GGTGACATCTCTGGCATTAATGCTTCAGTTGTAAACATTCAAAAAGAAATTGACCGCCTCAATGAGGTTG
+CCAAGAATTTAAATGAATCTCTCATCGATCTCCAAGAACTTGGAAAGTATGAGCAGTATATAAAATGGCC
+ATGGTACATTTGGCTAGGTTTTATAGCTGGCTTGATTGCCATAGTAATGGTGACAATTATGCTTTGCTGT
+ATGACCAGTTGCTGTAGTTGTCTCAAGGGCTGTTGTTCTTGTGGATCCTGCTGCAAATTTGATGAAGACG
+ACTCTGAGCCAGTGCTCAAAGGAGTCAAATTACATTACACATAAACGAACTTATGGATTTGTTTATGAGA
+ATCTTCACAATTGGAACTGTAACTTTGAAGCAAGGTGAAATCAAGGATGCTACTCCTTCAGATTTTGTTC
+GCGCTACTGCAACGATACCGATACAAGCCTCACTCCCTTTCGGATGGCTTATTGTTGGCGTTGCACTTCT
+TGCTGTTTTTCAGAGCGCTTCCAAAATCATAACCCTCAAAAAGAGATGGCAACTAGCACTCTCCAAGGGT
+GTTCACTTTGTTTGCAACTTGCTGTTGTTGTTTGTAACAGTTTACTCACACCTTTTGCTCGTTGCTGCTG
+GCCTTGAAGCCCCTTTTCTCTATCTTTATGCTTTAGTCTACTTCTTGCAGAGTATAAACTTTGTAAGAAT
+AATAATGAGGCTTTGGCTTTGCTGGAAATGCCGTTCCAAAAACCCATTACTTTATGATGCCAACTATTTT
+CTTTGCTGGCATACTAATTGTTACGACTATTGTATACCTTACAATAGTGTAACTTCTTCAATTGTCATTA
+CTTCAGGTGATGGCACAACAAGTCCTATTTCTGAACATGACTACCAGATTGGTGGTTATACTGAAAAATG
+GGAATCTGGAGTAAAAGACTGTGTTGTATTACACAGTTACTTCACTTCAGACTATTACCAGCTGTACTCA
+ACTCAATTGAGTACAGACACTGGTGTTGAACATGTTACCTTCTTCATCTACAATAAAATTGTTGATGAGC
+CTGAAGAACATGTCCAAATTCACACAATCGACGGTTCATCCGGAGTTGTTAATCCAGTAATGGAACCAAT
+TTATGATGAACCGACGACGACTACTAGCGTGCCTTTGTAAGCACAAGCTGATGAGTACGAACTTATGTAC
+TCATTCGTTTCGGAAGAGACAGGTACGTTAATAGTTAATAGCGTACTTCTTTTTCTTGCTTTCGTGGTAT
+TCTTGCTAGTTACACTAGCCATCCTTACTGCGCTTCGATTGTGTGCGTACTGCTGCAATATTGTTAACGT
+GAGTCTTGTAAAACCTTCTTTTTACGTTTACTCTCGTGTTAAAAATCTGAATTCTTCTAGAGTTCCTGAT
+CTTCTGGTCTAAACGAACTAAATATTATATTAGTTTTTCTGTTTGGAACTTTAATTTTAGCCATGGCAGA
+TTCCAACGGTACTATTACCGTTGAAGAGCTTAAAAAGCTCCTTGAACAATGGAACCTAGTAATAGGTTTC
+CTATTCCTTACATGGATTTGTCTTCTACAATTTGCCTATGCCAACAGGAATAGGTTTTTGTATATAATTA
+AGTTAATTTTCCTCTGGCTGTTATGGCCAGTAACTTTAGCTTGTTTTGTGCTTGCTGCTGTTTACAGAAT
+AAATTGGATCACCGGTGGAATTGCTATCGCAATGGCTTGTCTTGTAGGCTTGATGTGGCTCAGCTACTTC
+ATTGCTTCTTTCAGACTGTTTGCGCGTACGCGTTCCATGTGGTCATTCAATCCAGAAACTAACATTCTTC
+TCAACGTGCCACTCCATGGCACTATTCTGACCAGACCGCTTCTAGAAAGTGAACTCGTAATCGGAGCTGT
+GATCCTTCGTGGACATCTTCGTATTGCTGGACACCATCTAGGACGCTGTGACATCAAGGACCTGCCTAAA
+GAAATCACTGTTGCTACATCACGAACGCTTTCTTATTACAAATTGGGAGCTTCGCAGCGTGTAGCAGGTG
+ACTCAGGTTTTGCTGCATACAGTCGCTACAGGATTGGCAACTATAAATTAAACACAGACCATTCCAGTAG
+CAGTGACAATATTGCTTTGCTTGTACAGTAAGTGACAACAGATGTTTCATCTCGTTGACTTTCAGGTTAC
+TATAGCAGAGATATTACTAATTATTATGAGGACTTTTAAAGTTTCCATTTGGAATCTTGATTACATCATA
+AACCTCATAATTAAAAATTTATCTAAGTCACTAACTGAGAATAAATATTCTCAATTAGATGAAGAGCAAC
+CAATGGAGATTGATTAAACGAACATGAAAATTATTCTTTTCTTGGCACTGATAACACTCGCTACTTGTGA
+GCTTTATCACTACCAAGAGTGTGTTAGAGGTACAACAGTACTTTTAAAAGAACCTTGCTCTTCTGGAACA
+TACGAGGGCAATTCACCATTTCATCCTCTAGCTGATAACAAATTTGCACTGACTTGCTTTAGCACTCAAT
+TTGCTTTTGCTTGTCCTGACGGCGTAAAACACGTCTATCAGTTACGTGCCAGATCAGTTTCACCTAAACT
+GTTCATCAGACAAGAGGAAGTTCAAGAACTTTACTCTCCAATTTTTCTTATTGTTGCGGCAATAGTGTTT
+ATAACACTTTGCTTCACACTCAAAAGAAAGACAGAATGATTGAACTTTCATTAATTGACTTCTATTTGTG
+CTTTTTAGCCTTTCTGCTATTCCTTGTTTTAATTATGCTTATTATCTTTTGGTTCTCACTTGAACTGCAA
+GATCATAATGAAACTTGTCACGCCTAAACGAACATGAAATTTCTTGTTTTCTTAGGAATCATCACAACTG
+TAGCTGCATTTCACCAAGAATGTAGTTTACAGTCATGTACTCAACATCAACCATATGTAGTTGATGACCC
+GTGTCCTATTCACTTCTATTCTAAATGGTATATTAGAGTAGGAGCTAGAAAATCAGCACCTTTAATTGAA
+TTGTGCGTGGATGAGGCTGGTTCTAAATCACCCATTCAGTACATCGATATCGGTAATTATACAGTTTCCT
+GTTTACCTTTTACAATTAATTGCCAGGAACCTAAATTGGGTAGTCTTGTAGTGCGTTGTTCGTTCTATGA
+AGACTTTTTAGAGTATCATGACGTTCGTGTTGTTTTAGATTTCATCTAAACGAACAAACTAAAATGTCTG
+ATAATGGACCCCAAAATCAGCGAAATGCACCCCGCATTACGTTTGGTGGACCCTCAGATTCAACTGGCAG
+TAACCAGAATGGAGAACGCAGTGGGGCGCGATCAAAACAACGTCGGCCCCAAGGTTTACCCAATAATACT
+GCGTCTTGGTTCACCGCTCTCACTCAACATGGCAAGGAAGACCTTAAATTCCCTCGAGGACAAGGCGTTC
+CAATTAACACCAATAGCAGTCCAGATGACCAAATTGGCTACTACCGAAGAGCTACCAGACGAATTCGTGG
+TGGTGACGGTAAAATGAAAGATCTCAGTCCAAGATGGTATTTCTACTACCTAGGAACTGGGCCAGAAGCT
+GGACTTCCCTATGGTGCTAACAAAGACGGCATCATATGGGTTGCAACTGAGGGAGCCTTGAATACACCAA
+AAGATCACATTGGCACCCGCAATCCTGCTAACAATGCTGCAATCGTGCTACAACTTCCTCAAGGAACAAC
+ATTGCCAAAAGGCTTCTACGCAGAAGGGAGCAGAGGCGGCAGTCAAGCCTCTTCTCGTTCCTCATCACGT
+AGTCGCAACAGTTCAAGAAATTCAACTCCAGGCAGCAGTAGGGGAACTTCTCCTGCTAGAATGGCTGGCA
+ATGGCGGTGATGCTGCTCTTGCTTTGCTGCTGCTTGACAGATTGAACCAGCTTGAGAGCAAAATGTCTGG
+TAAAGGCCAACAACAACAAGGCCAAACTGTCACTAAGAAATCTGCTGCTGAGGCTTCTAAGAAGCCTCGG
+CAAAAACGTACTGCCACTAAAGCATACAATGTAACACAAGCTTTCGGCAGACGTGGTCCAGAACAAACCC
+AAGGAAATTTTGGGGACCAGGAACTAATCAGACAAGGAACTGATTACAAACATTGGCCGCAAATTGCACA
+ATTTGCCCCCAGCGCTTCAGCGTTCTTCGGAATGTCGCGCATTGGCATGGAAGTCACACCTTCGGGAACG
+TGGTTGACCTACACAGGTGCCATCAAATTGGATGACAAAGATCCAAATTTCAAAGATCAAGTCATTTTGC
+TGAATAAGCATATTGACGCATACAAAACATTCCCACCAACAGAGCCTAAAAAGGACAAAAAGAAGAAGGC
+TGATGAAACTCAAGCCTTACCGCAGAGACAGAAGAAACAGCAAACTGTGACTCTTCTTCCTGCTGCAGAT
+TTGGATGATTTCTCCAAACAATTGCAACAATCCATGAGCAGTGCTGACTCAACTCAGGCCTAAACTCATG
+CAGACCACACAAGGCAGATGGGCTATATAAACGTTTTCGCTTTTCCGTTTACGATATATAGTCTACTCTT
+GTGCAGAATGAATTCTCGTAACTACATAGCACAAGTAGATGTAGTTAACTTTAATCTCACATAGCAATCT
+TTAATCAGTGTGTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTAC
+GATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAAT
+TTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAA
+AAAAAAAAAAAAA
+
diff -r f079716f598c -r 029d90b0c4f6 test-data/NC_045512.2.fasta.gz
Binary file test-data/NC_045512.2.fasta.gz has changed
diff -r f079716f598c -r 029d90b0c4f6 test-data/frameshift_deletions_check.tsv
--- a/test-data/frameshift_deletions_check.tsv Wed May 31 17:10:11 2023 +0000
+++ b/test-data/frameshift_deletions_check.tsv Fri Jul 14 22:07:22 2023 +0000
@@ -1,140 +1,140 @@
- ref_id start_position length VARIANT gene_region reads_all reads_fwd reads_rev deletions freq_del freq_del_fwd freq_del_rev deletions_fwd deletions_rev insertions freq_insert freq_insert_fwd freq_insert_rev insertions_fwd insertions_rev stops freq_stop freq_stop_fwd freq_stop_rev stops_fwd stops_rev matches_ref pos_critical_inserts pos_critical_dels homopolymeric ref_base cons_id variant_position_english variant_diagnosis
-0 NC_045512.2 5600 2 deletion ORF1ab 40 40 0 23 0.575 0.575 0 23 0 0 0.0 0.0 0 0 0 0 0 0 0 0 0 17 [21101] [8740, 18800] 1 b'T' NC_045512.2 Gap of 2 nucleotide(s) found at refpos 5600 only fwd or rev reads available, deletion supported by the majority of them; homopolymeric; neighboring indels may restore reading frame
-1 NC_045512.2 5602 3 stopgain ORF1ab 40 40 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 40 1.0 1.0 0 40 0 40 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 5602, aminoacid position 1779 only fwd or rev reads available, stopgain supported by the majority of them
-2 NC_045512.2 5635 3 stopgain ORF1ab 40 40 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 40 1.0 1.0 0 40 0 40 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 5635, aminoacid position 1790 only fwd or rev reads available, stopgain supported by the majority of them
-3 NC_045512.2 5707 3 stopgain ORF1ab 63 39 24 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 63 1.0 1.0 1.0 39 24 63 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 5707, aminoacid position 1814 stopgain supported by majority of fwd and rev reads
-4 NC_045512.2 5713 3 stopgain ORF1ab 72 39 33 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 72 1.0 1.0 1.0 39 33 72 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 5713, aminoacid position 1816 stopgain supported by majority of fwd and rev reads
-5 NC_045512.2 5737 3 stopgain ORF1ab 79 39 40 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 79 1.0 1.0 1.0 39 40 79 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 5737, aminoacid position 1824 stopgain supported by majority of fwd and rev reads
-6 NC_045512.2 5740 3 stopgain ORF1ab 79 39 40 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 79 1.0 1.0 1.0 39 40 79 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 5740, aminoacid position 1825 stopgain supported by majority of fwd and rev reads
-7 NC_045512.2 5752 3 stopgain ORF1ab 79 39 40 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 79 1.0 1.0 1.0 39 40 79 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 5752, aminoacid position 1829 stopgain supported by majority of fwd and rev reads
-8 NC_045512.2 5773 3 stopgain ORF1ab 78 38 40 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 78 1.0 1.0 1.0 38 40 78 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 5773, aminoacid position 1836 stopgain supported by majority of fwd and rev reads
-9 NC_045512.2 5788 3 stopgain ORF1ab 74 34 40 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 74 1.0 1.0 1.0 34 40 74 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 5788, aminoacid position 1841 stopgain supported by majority of fwd and rev reads
-10 NC_045512.2 5911 3 stopgain ORF1ab 45 5 40 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 45 1.0 1.0 1.0 5 40 45 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 5911, aminoacid position 1882 stopgain supported by majority of fwd and rev reads
-11 NC_045512.2 6043 3 stopgain ORF1ab 10 5 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 10 1.0 1.0 1.0 5 5 10 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 6043, aminoacid position 1926 stopgain supported by majority of fwd and rev reads
-12 NC_045512.2 6049 3 stopgain ORF1ab 10 5 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 10 1.0 1.0 1.0 5 5 10 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 6049, aminoacid position 1928 stopgain supported by majority of fwd and rev reads
-13 NC_045512.2 6061 3 stopgain ORF1ab 10 5 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 10 1.0 1.0 1.0 5 5 10 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 6061, aminoacid position 1932 stopgain supported by majority of fwd and rev reads
-14 NC_045512.2 6064 3 stopgain ORF1ab 10 5 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 10 1.0 1.0 1.0 5 5 10 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 6064, aminoacid position 1933 stopgain supported by majority of fwd and rev reads
-15 NC_045512.2 6079 3 stopgain ORF1ab 10 5 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 10 1.0 1.0 1.0 5 5 10 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 6079, aminoacid position 1938 stopgain supported by majority of fwd and rev reads
-16 NC_045512.2 6082 3 stopgain ORF1ab 10 5 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 10 1.0 1.0 1.0 5 5 10 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 6082, aminoacid position 1939 stopgain supported by majority of fwd and rev reads
-17 NC_045512.2 6106 3 stopgain ORF1ab 10 5 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 10 1.0 1.0 1.0 5 5 10 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 6106, aminoacid position 1947 stopgain supported by majority of fwd and rev reads
-18 NC_045512.2 6202 3 stopgain ORF1ab 86 81 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 86 1.0 1.0 1.0 81 5 86 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 6202, aminoacid position 1979 stopgain supported by majority of fwd and rev reads
-19 NC_045512.2 6214 3 stopgain ORF1ab 86 81 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 86 1.0 1.0 1.0 81 5 86 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 6214, aminoacid position 1983 stopgain supported by majority of fwd and rev reads
-20 NC_045512.2 6226 3 stopgain ORF1ab 86 81 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 86 1.0 1.0 1.0 81 5 86 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 6226, aminoacid position 1987 stopgain supported by majority of fwd and rev reads
-21 NC_045512.2 6247 3 stopgain ORF1ab 86 81 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 86 1.0 1.0 1.0 81 5 86 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 6247, aminoacid position 1994 stopgain supported by majority of fwd and rev reads
-22 NC_045512.2 6259 3 stopgain ORF1ab 81 81 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 81 1.0 1.0 0 81 0 81 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 6259, aminoacid position 1998 only fwd or rev reads available, stopgain supported by the majority of them
-23 NC_045512.2 6262 3 stopgain ORF1ab 81 81 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 81 1.0 1.0 0 81 0 81 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 6262, aminoacid position 1999 only fwd or rev reads available, stopgain supported by the majority of them
-24 NC_045512.2 6274 3 stopgain ORF1ab 80 80 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 80 1.0 1.0 0 80 0 80 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 6274, aminoacid position 2003 only fwd or rev reads available, stopgain supported by the majority of them
-25 NC_045512.2 6322 3 stopgain ORF1ab 153 80 73 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 153 1.0 1.0 1.0 80 73 153 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 6322, aminoacid position 2019 stopgain supported by majority of fwd and rev reads
-26 NC_045512.2 6340 3 stopgain ORF1ab 157 80 77 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 157 1.0 1.0 1.0 80 77 157 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 6340, aminoacid position 2025 stopgain supported by majority of fwd and rev reads
-27 NC_045512.2 6376 3 stopgain ORF1ab 157 78 79 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 157 1.0 1.0 1.0 78 79 157 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 6376, aminoacid position 2037 stopgain supported by majority of fwd and rev reads
-28 NC_045512.2 6409 3 stopgain ORF1ab 152 71 81 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 152 1.0 1.0 1.0 71 81 152 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 6409, aminoacid position 2048 stopgain supported by majority of fwd and rev reads
-29 NC_045512.2 6451 3 stopgain ORF1ab 81 0 81 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 81 1.0 0 1.0 0 81 81 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 6451, aminoacid position 2062 only fwd or rev reads available, stopgain supported by the majority of them
-30 NC_045512.2 6457 3 stopgain ORF1ab 81 0 81 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 81 1.0 0 1.0 0 81 81 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 6457, aminoacid position 2064 only fwd or rev reads available, stopgain supported by the majority of them
-31 NC_045512.2 6496 3 stopgain ORF1ab 86 5 81 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 86 1.0 1.0 1.0 5 81 86 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 6496, aminoacid position 2077 stopgain supported by majority of fwd and rev reads
-32 NC_045512.2 6508 3 stopgain ORF1ab 86 5 81 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 86 1.0 1.0 1.0 5 81 86 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 6508, aminoacid position 2081 stopgain supported by majority of fwd and rev reads
-33 NC_045512.2 6511 3 stopgain ORF1ab 86 5 81 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 86 1.0 1.0 1.0 5 81 86 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 6511, aminoacid position 2082 stopgain supported by majority of fwd and rev reads
-34 NC_045512.2 6655 3 stopgain ORF1ab 10 5 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 10 1.0 1.0 1.0 5 5 10 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 6655, aminoacid position 2130 stopgain supported by majority of fwd and rev reads
-35 NC_045512.2 6658 3 stopgain ORF1ab 10 5 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 10 1.0 1.0 1.0 5 5 10 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 6658, aminoacid position 2131 stopgain supported by majority of fwd and rev reads
-36 NC_045512.2 6682 3 stopgain ORF1ab 10 5 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 10 1.0 1.0 1.0 5 5 10 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 6682, aminoacid position 2139 stopgain supported by majority of fwd and rev reads
-37 NC_045512.2 6691 3 stopgain ORF1ab 10 5 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 10 1.0 1.0 1.0 5 5 10 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 6691, aminoacid position 2142 stopgain supported by majority of fwd and rev reads
-38 NC_045512.2 7342 3 stopgain ORF1ab 173 169 4 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 173 1.0 1.0 1.0 169 4 173 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 7342, aminoacid position 2359 stopgain supported by majority of fwd and rev reads
-39 NC_045512.2 7345 3 stopgain ORF1ab 173 169 4 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 173 1.0 1.0 1.0 169 4 173 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 7345, aminoacid position 2360 stopgain supported by majority of fwd and rev reads
-40 NC_045512.2 7372 3 stopgain ORF1ab 173 169 4 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 173 1.0 1.0 1.0 169 4 173 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 7372, aminoacid position 2369 stopgain supported by majority of fwd and rev reads
-41 NC_045512.2 7408 3 stopgain ORF1ab 168 168 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 168 1.0 1.0 0 168 0 168 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 7408, aminoacid position 2381 only fwd or rev reads available, stopgain supported by the majority of them
-42 NC_045512.2 7477 3 stopgain ORF1ab 330 167 163 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 330 1.0 1.0 1.0 167 163 330 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 7477, aminoacid position 2404 stopgain supported by majority of fwd and rev reads
-43 NC_045512.2 7510 3 stopgain ORF1ab 334 166 168 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 334 1.0 1.0 1.0 166 168 334 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 7510, aminoacid position 2415 stopgain supported by majority of fwd and rev reads
-44 NC_045512.2 7513 3 stopgain ORF1ab 333 165 168 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 333 1.0 1.0 1.0 165 168 333 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 7513, aminoacid position 2416 stopgain supported by majority of fwd and rev reads
-45 NC_045512.2 7546 3 stopgain ORF1ab 309 141 168 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 309 1.0 1.0 1.0 141 168 309 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 7546, aminoacid position 2427 stopgain supported by majority of fwd and rev reads
-46 NC_045512.2 7555 3 stopgain ORF1ab 289 121 168 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 289 1.0 1.0 1.0 121 168 289 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 7555, aminoacid position 2430 stopgain supported by majority of fwd and rev reads
-47 NC_045512.2 7579 3 stopgain ORF1ab 169 0 169 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 169 1.0 0 1.0 0 169 169 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 7579, aminoacid position 2438 only fwd or rev reads available, stopgain supported by the majority of them
-48 NC_045512.2 7588 3 stopgain ORF1ab 169 0 169 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 169 1.0 0 1.0 0 169 169 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 7588, aminoacid position 2441 only fwd or rev reads available, stopgain supported by the majority of them
-49 NC_045512.2 7624 3 stopgain ORF1ab 170 0 170 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 170 1.0 0 1.0 0 170 170 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 7624, aminoacid position 2453 only fwd or rev reads available, stopgain supported by the majority of them
-50 NC_045512.2 7630 3 stopgain ORF1ab 170 0 170 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 170 1.0 0 1.0 0 170 170 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 7630, aminoacid position 2455 only fwd or rev reads available, stopgain supported by the majority of them
-51 NC_045512.2 7648 3 stopgain ORF1ab 170 0 170 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 170 1.0 0 1.0 0 170 170 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 7648, aminoacid position 2461 only fwd or rev reads available, stopgain supported by the majority of them
-52 NC_045512.2 7660 3 stopgain ORF1ab 176 6 170 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 176 1.0 1.0 1.0 6 170 176 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 7660, aminoacid position 2465 stopgain supported by majority of fwd and rev reads
-53 NC_045512.2 7663 3 stopgain ORF1ab 176 6 170 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 173 0.9829545454545454 1.0 0.9823529411764705 6 167 173 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 7663, aminoacid position 2466 stopgain supported by majority of fwd and rev reads
-54 NC_045512.2 7666 3 stopgain ORF1ab 176 6 170 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 176 1.0 1.0 1.0 6 170 176 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 7666, aminoacid position 2467 stopgain supported by majority of fwd and rev reads
-55 NC_045512.2 7780 3 stopgain ORF1ab 11 6 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 11 1.0 1.0 1.0 6 5 11 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 7780, aminoacid position 2505 stopgain supported by majority of fwd and rev reads
-56 NC_045512.2 7783 3 stopgain ORF1ab 11 6 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 11 1.0 1.0 1.0 6 5 11 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 7783, aminoacid position 2506 stopgain supported by majority of fwd and rev reads
-57 NC_045512.2 7804 3 stopgain ORF1ab 12 6 6 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 12 1.0 1.0 1.0 6 6 12 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 7804, aminoacid position 2513 stopgain supported by majority of fwd and rev reads
-58 NC_045512.2 7831 3 stopgain ORF1ab 12 6 6 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 12 1.0 1.0 1.0 6 6 12 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 7831, aminoacid position 2522 stopgain supported by majority of fwd and rev reads
-59 NC_045512.2 7852 3 stopgain ORF1ab 12 6 6 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 12 1.0 1.0 1.0 6 6 12 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 7852, aminoacid position 2529 stopgain supported by majority of fwd and rev reads
-60 NC_045512.2 7855 3 stopgain ORF1ab 12 6 6 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 12 1.0 1.0 1.0 6 6 12 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 7855, aminoacid position 2530 stopgain supported by majority of fwd and rev reads
-61 NC_045512.2 7861 3 stopgain ORF1ab 11 5 6 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 11 1.0 1.0 1.0 5 6 11 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 7861, aminoacid position 2532 stopgain supported by majority of fwd and rev reads
-62 NC_045512.2 7999 3 stopgain ORF1ab 23 23 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 23 1.0 1.0 0 23 0 23 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 7999, aminoacid position 2578 only fwd or rev reads available, stopgain supported by the majority of them
-63 NC_045512.2 8008 3 stopgain ORF1ab 23 23 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 23 1.0 1.0 0 23 0 23 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 8008, aminoacid position 2581 only fwd or rev reads available, stopgain supported by the majority of them
-64 NC_045512.2 8011 3 stopgain ORF1ab 23 23 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 23 1.0 1.0 0 23 0 23 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 8011, aminoacid position 2582 only fwd or rev reads available, stopgain supported by the majority of them
-65 NC_045512.2 8029 3 stopgain ORF1ab 23 23 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 23 1.0 1.0 0 23 0 23 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 8029, aminoacid position 2588 only fwd or rev reads available, stopgain supported by the majority of them
-66 NC_045512.2 8038 3 stopgain ORF1ab 23 23 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 23 1.0 1.0 0 23 0 23 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 8038, aminoacid position 2591 only fwd or rev reads available, stopgain supported by the majority of them
-67 NC_045512.2 8050 3 stopgain ORF1ab 23 23 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 23 1.0 1.0 0 23 0 23 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 8050, aminoacid position 2595 only fwd or rev reads available, stopgain supported by the majority of them
-68 NC_045512.2 8071 3 stopgain ORF1ab 23 23 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 23 1.0 1.0 0 23 0 23 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 8071, aminoacid position 2602 only fwd or rev reads available, stopgain supported by the majority of them
-69 NC_045512.2 8119 3 stopgain ORF1ab 46 23 23 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 46 1.0 1.0 1.0 23 23 46 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 8119, aminoacid position 2618 stopgain supported by majority of fwd and rev reads
-70 NC_045512.2 8191 3 stopgain ORF1ab 42 19 23 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 42 1.0 1.0 1.0 19 23 42 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 8191, aminoacid position 2642 stopgain supported by majority of fwd and rev reads
-71 NC_045512.2 8209 3 stopgain ORF1ab 23 0 23 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 23 1.0 0 1.0 0 23 23 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 8209, aminoacid position 2648 only fwd or rev reads available, stopgain supported by the majority of them
-72 NC_045512.2 8221 3 stopgain ORF1ab 23 0 23 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 23 1.0 0 1.0 0 23 23 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 8221, aminoacid position 2652 only fwd or rev reads available, stopgain supported by the majority of them
-73 NC_045512.2 8230 3 stopgain ORF1ab 23 0 23 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 23 1.0 0 1.0 0 23 23 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 8230, aminoacid position 2655 only fwd or rev reads available, stopgain supported by the majority of them
-74 NC_045512.2 8248 3 stopgain ORF1ab 23 0 23 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 23 1.0 0 1.0 0 23 23 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 8248, aminoacid position 2661 only fwd or rev reads available, stopgain supported by the majority of them
-75 NC_045512.2 8269 3 stopgain ORF1ab 23 0 23 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 23 1.0 0 1.0 0 23 23 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 8269, aminoacid position 2668 only fwd or rev reads available, stopgain supported by the majority of them
-76 NC_045512.2 8275 3 stopgain ORF1ab 23 0 23 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 23 1.0 0 1.0 0 23 23 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 8275, aminoacid position 2670 only fwd or rev reads available, stopgain supported by the majority of them
-77 NC_045512.2 8278 3 stopgain ORF1ab 23 0 23 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 23 1.0 0 1.0 0 23 23 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 8278, aminoacid position 2671 only fwd or rev reads available, stopgain supported by the majority of them
-78 NC_045512.2 8296 3 stopgain ORF1ab 23 0 23 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 23 1.0 0 1.0 0 23 23 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 8296, aminoacid position 2677 only fwd or rev reads available, stopgain supported by the majority of them
-79 NC_045512.2 8305 3 stopgain ORF1ab 23 0 23 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 23 1.0 0 1.0 0 23 23 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 8305, aminoacid position 2680 only fwd or rev reads available, stopgain supported by the majority of them
-80 NC_045512.2 8656 3 stopgain ORF1ab 10 10 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 10 1.0 1.0 0 10 0 10 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 8656, aminoacid position 2797 only fwd or rev reads available, stopgain supported by the majority of them
-81 NC_045512.2 8665 3 stopgain ORF1ab 10 10 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 10 1.0 1.0 0 10 0 10 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 8665, aminoacid position 2800 only fwd or rev reads available, stopgain supported by the majority of them
-82 NC_045512.2 8677 3 stopgain ORF1ab 10 10 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 10 1.0 1.0 0 10 0 10 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 8677, aminoacid position 2804 only fwd or rev reads available, stopgain supported by the majority of them
-83 NC_045512.2 8701 3 stopgain ORF1ab 10 10 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 10 1.0 1.0 0 10 0 10 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 8701, aminoacid position 2812 only fwd or rev reads available, stopgain supported by the majority of them
-84 NC_045512.2 8719 3 stopgain ORF1ab 10 10 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 10 1.0 1.0 0 10 0 10 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 8719, aminoacid position 2818 only fwd or rev reads available, stopgain supported by the majority of them
-85 NC_045512.2 8740 1 deletion ORF1ab 20 10 10 10 0.5 0.5 0.5 5 5 0 0.0 0.0 0.0 0 0 0 0 0 0 0 0 10 [21101] [5600, 5601, 18800] 1 b'T' NC_045512.2 Gap of 1 nucleotide(s) found at refpos 8740 deletion supported by minority of fwd or rev reads [5%-50%]; homopolymeric; neighboring indels may restore reading frame
-86 NC_045512.2 9791 3 stopgain ORF1ab 23 0 23 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 23 1.0 0 1.0 0 23 0 [] [] 0 b'G' NC_045512.2 Early Stopgain found at refpos 9791, aminoacid position 3175, with 1 mismatches only fwd or rev reads available, stopgain supported by the majority of them
-87 NC_045512.2 18800 1 deletion ORF1ab 111 54 57 66 0.5945945945945946 0.5925925925925926 0.5964912280701754 32 34 0 0.0 0.0 0.0 0 0 0 0 0 0 0 0 45 [21101] [5600, 5601, 8740] 1 b'A' NC_045512.2 Gap of 1 nucleotide(s) found at refpos 18800 deletion supported by majority of fwd and rev reads; homopolymeric; neighboring indels may restore reading frame
-88 NC_045512.2 18845 3 stopgain ORF1ab 104 47 57 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 104 1.0 1.0 1.0 47 57 104 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 18845, aminoacid position 6193 stopgain supported by majority of fwd and rev reads
-89 NC_045512.2 18866 3 stopgain ORF1ab 57 0 57 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 57 1.0 0 1.0 0 57 57 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 18866, aminoacid position 6200 only fwd or rev reads available, stopgain supported by the majority of them
-90 NC_045512.2 18878 3 stopgain ORF1ab 57 0 57 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 57 1.0 0 1.0 0 57 57 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 18878, aminoacid position 6204 only fwd or rev reads available, stopgain supported by the majority of them
-91 NC_045512.2 18932 3 stopgain ORF1ab 65 8 57 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 65 1.0 1.0 1.0 8 57 65 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 18932, aminoacid position 6222 stopgain supported by majority of fwd and rev reads
-92 NC_045512.2 18947 3 stopgain ORF1ab 65 8 57 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 65 1.0 1.0 1.0 8 57 65 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 18947, aminoacid position 6227 stopgain supported by majority of fwd and rev reads
-93 NC_045512.2 19076 3 stopgain ORF1ab 16 8 8 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 16 1.0 1.0 1.0 8 8 16 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 19076, aminoacid position 6270 stopgain supported by majority of fwd and rev reads
-94 NC_045512.2 19127 3 stopgain ORF1ab 16 8 8 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 16 1.0 1.0 1.0 8 8 16 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 19127, aminoacid position 6287 stopgain supported by majority of fwd and rev reads
-95 NC_045512.2 19301 3 stopgain ORF1ab 104 104 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 104 1.0 1.0 0 104 0 104 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 19301, aminoacid position 6345 only fwd or rev reads available, stopgain supported by the majority of them
-96 NC_045512.2 19355 3 stopgain ORF1ab 104 104 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 104 1.0 1.0 0 104 0 104 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 19355, aminoacid position 6363 only fwd or rev reads available, stopgain supported by the majority of them
-97 NC_045512.2 19415 3 stopgain ORF1ab 201 101 100 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 201 1.0 1.0 1.0 101 100 201 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 19415, aminoacid position 6383 stopgain supported by majority of fwd and rev reads
-98 NC_045512.2 19427 3 stopgain ORF1ab 200 100 100 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 200 1.0 1.0 1.0 100 100 200 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 19427, aminoacid position 6387 stopgain supported by majority of fwd and rev reads
-99 NC_045512.2 19442 3 stopgain ORF1ab 197 96 101 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 197 1.0 1.0 1.0 96 101 197 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 19442, aminoacid position 6392 stopgain supported by majority of fwd and rev reads
-100 NC_045512.2 19460 3 stopgain ORF1ab 108 7 101 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 108 1.0 1.0 1.0 7 101 108 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 19460, aminoacid position 6398 stopgain supported by majority of fwd and rev reads
-101 NC_045512.2 19475 3 stopgain ORF1ab 103 0 103 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 103 1.0 0 1.0 0 103 103 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 19475, aminoacid position 6403 only fwd or rev reads available, stopgain supported by the majority of them
-102 NC_045512.2 19538 3 stopgain ORF1ab 103 0 103 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 103 1.0 0 1.0 0 103 103 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 19538, aminoacid position 6424 only fwd or rev reads available, stopgain supported by the majority of them
-103 NC_045512.2 19541 3 stopgain ORF1ab 103 0 103 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 103 1.0 0 1.0 0 103 103 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 19541, aminoacid position 6425 only fwd or rev reads available, stopgain supported by the majority of them
-104 NC_045512.2 19625 3 stopgain ORF1ab 39 39 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 39 1.0 1.0 0 39 0 39 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 19625, aminoacid position 6453 only fwd or rev reads available, stopgain supported by the majority of them
-105 NC_045512.2 19649 3 stopgain ORF1ab 40 39 1 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 40 1.0 1.0 1.0 39 1 40 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 19649, aminoacid position 6461 stopgain supported by majority of fwd and rev reads
-106 NC_045512.2 19739 3 stopgain ORF1ab 78 39 39 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 78 1.0 1.0 1.0 39 39 78 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 19739, aminoacid position 6491 stopgain supported by majority of fwd and rev reads
-107 NC_045512.2 19778 3 stopgain ORF1ab 77 38 39 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 77 1.0 1.0 1.0 38 39 77 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 19778, aminoacid position 6504 stopgain supported by majority of fwd and rev reads
-108 NC_045512.2 19826 3 stopgain ORF1ab 39 0 39 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 39 1.0 0 1.0 0 39 39 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 19826, aminoacid position 6520 only fwd or rev reads available, stopgain supported by the majority of them
-109 NC_045512.2 19871 3 stopgain ORF1ab 108 69 39 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 108 1.0 1.0 1.0 69 39 108 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 19871, aminoacid position 6535 stopgain supported by majority of fwd and rev reads
-110 NC_045512.2 19931 3 stopgain ORF1ab 69 69 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 69 1.0 1.0 0 69 0 69 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 19931, aminoacid position 6555 only fwd or rev reads available, stopgain supported by the majority of them
-111 NC_045512.2 19940 3 stopgain ORF1ab 69 69 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 68 0.9855072463768116 0.9855072463768116 0 68 0 68 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 19940, aminoacid position 6558 only fwd or rev reads available, stopgain supported by the majority of them
-112 NC_045512.2 20012 3 stopgain ORF1ab 131 69 62 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 131 1.0 1.0 1.0 69 62 131 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 20012, aminoacid position 6582 stopgain supported by majority of fwd and rev reads
-113 NC_045512.2 20084 3 stopgain ORF1ab 133 64 69 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 133 1.0 1.0 1.0 64 69 133 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 20084, aminoacid position 6606 stopgain supported by majority of fwd and rev reads
-114 NC_045512.2 20120 3 stopgain ORF1ab 69 0 69 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 69 1.0 0 1.0 0 69 69 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 20120, aminoacid position 6618 only fwd or rev reads available, stopgain supported by the majority of them
-115 NC_045512.2 20135 3 stopgain ORF1ab 69 0 69 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 69 1.0 0 1.0 0 69 69 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 20135, aminoacid position 6623 only fwd or rev reads available, stopgain supported by the majority of them
-116 NC_045512.2 20534 3 stopgain ORF1ab 251 251 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 251 1.0 1.0 0 251 0 251 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 20534, aminoacid position 6756 only fwd or rev reads available, stopgain supported by the majority of them
-117 NC_045512.2 20537 3 stopgain ORF1ab 251 251 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 251 1.0 1.0 0 251 0 251 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 20537, aminoacid position 6757 only fwd or rev reads available, stopgain supported by the majority of them
-118 NC_045512.2 20558 3 stopgain ORF1ab 250 250 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 250 1.0 1.0 0 250 0 250 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 20558, aminoacid position 6764 only fwd or rev reads available, stopgain supported by the majority of them
-119 NC_045512.2 20579 3 stopgain ORF1ab 250 250 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 250 1.0 1.0 0 250 0 250 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 20579, aminoacid position 6771 only fwd or rev reads available, stopgain supported by the majority of them
-120 NC_045512.2 20633 3 stopgain ORF1ab 250 249 1 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 250 1.0 1.0 1.0 249 1 250 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 20633, aminoacid position 6789 stopgain supported by majority of fwd and rev reads
-121 NC_045512.2 20723 3 stopgain ORF1ab 442 194 248 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 442 1.0 1.0 1.0 194 248 442 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 20723, aminoacid position 6819 stopgain supported by majority of fwd and rev reads
-122 NC_045512.2 20777 3 stopgain ORF1ab 250 0 250 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 250 1.0 0 1.0 0 250 250 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 20777, aminoacid position 6837 only fwd or rev reads available, stopgain supported by the majority of them
-123 NC_045512.2 20780 3 stopgain ORF1ab 250 0 250 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 250 1.0 0 1.0 0 250 250 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 20780, aminoacid position 6838 only fwd or rev reads available, stopgain supported by the majority of them
-124 NC_045512.2 20783 3 stopgain ORF1ab 250 0 250 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 250 1.0 0 1.0 0 250 250 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 20783, aminoacid position 6839 only fwd or rev reads available, stopgain supported by the majority of them
-125 NC_045512.2 20819 3 stopgain ORF1ab 275 24 251 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 275 1.0 1.0 1.0 24 251 275 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 20819, aminoacid position 6851 stopgain supported by majority of fwd and rev reads
-126 NC_045512.2 20828 3 stopgain ORF1ab 275 24 251 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 274 0.9963636363636363 1.0 0.9960159362549801 24 250 274 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 20828, aminoacid position 6854 stopgain supported by majority of fwd and rev reads
-127 NC_045512.2 20834 3 stopgain ORF1ab 275 24 251 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 275 1.0 1.0 1.0 24 251 275 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 20834, aminoacid position 6856 stopgain supported by majority of fwd and rev reads
-128 NC_045512.2 20852 3 stopgain ORF1ab 275 24 251 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 275 1.0 1.0 1.0 24 251 275 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 20852, aminoacid position 6862 stopgain supported by majority of fwd and rev reads
-129 NC_045512.2 20912 3 stopgain ORF1ab 24 24 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 24 1.0 1.0 0 24 0 24 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 20912, aminoacid position 6882 only fwd or rev reads available, stopgain supported by the majority of them
-130 NC_045512.2 20990 3 stopgain ORF1ab 48 24 24 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 48 1.0 1.0 1.0 24 24 48 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 20990, aminoacid position 6908 stopgain supported by majority of fwd and rev reads
-131 NC_045512.2 21140 3 stopgain ORF1ab 41 17 24 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 41 1.0 1.0 1.0 17 24 41 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 21140, aminoacid position 6958 stopgain supported by majority of fwd and rev reads
-132 NC_045512.2 21164 3 stopgain ORF1ab 17 17 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 17 1.0 1.0 0 17 0 17 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 21164, aminoacid position 6966 only fwd or rev reads available, stopgain supported by the majority of them
-133 NC_045512.2 21170 3 stopgain ORF1ab 17 17 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 17 1.0 1.0 0 17 0 17 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 21170, aminoacid position 6968 only fwd or rev reads available, stopgain supported by the majority of them
-134 NC_045512.2 21248 3 stopgain ORF1ab 34 17 17 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 34 1.0 1.0 1.0 17 17 34 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 21248, aminoacid position 6994 stopgain supported by majority of fwd and rev reads
-135 NC_045512.2 21275 3 stopgain ORF1ab 34 17 17 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 34 1.0 1.0 1.0 17 17 34 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 21275, aminoacid position 7003 stopgain supported by majority of fwd and rev reads
-136 NC_045512.2 21314 3 stopgain ORF1ab 31 14 17 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 31 1.0 1.0 1.0 14 17 31 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 21314, aminoacid position 7016 stopgain supported by majority of fwd and rev reads
-137 NC_045512.2 21398 3 stopgain ORF1ab 21 4 17 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 21 1.0 1.0 1.0 4 17 21 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 21398, aminoacid position 7044 stopgain supported by majority of fwd and rev reads
-138 NC_045512.2 21419 3 stopgain ORF1ab 21 4 17 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 21 1.0 1.0 1.0 4 17 21 [] [] 0 b'T' NC_045512.2 Early Stopgain found at refpos 21419, aminoacid position 7051 stopgain supported by majority of fwd and rev reads
+ref_id start_position length VARIANT gene_region reads_all reads_fwd reads_rev deletions freq_del freq_del_fwd freq_del_rev deletions_fwd deletions_rev insertions freq_insert freq_insert_fwd freq_insert_rev insertions_fwd insertions_rev stops freq_stop freq_stop_fwd freq_stop_rev stops_fwd stops_rev matches_ref pos_critical_inserts pos_critical_dels homopolymeric ref_base cons_id variant_position_english variant_diagnosis
+NC_045512.2 5600 2 deletion ORF1ab 40 40 0 23 0.575 0.575 0 23 0 0 0.0 0.0 0 0 0 0 0 0 0 0 0 17 21101 8740,18800 1 T NC_045512.2 Gap of 2 nucleotide(s) found at refpos 5600 only fwd or rev reads available, deletion supported by the majority of them; homopolymeric; neighboring indels may restore reading frame
+NC_045512.2 5602 3 stopgain ORF1ab 40 40 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 40 1.0 1.0 0 40 0 40 . . 0 T NC_045512.2 Early Stopgain found at refpos 5602, aminoacid position 1779 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 5635 3 stopgain ORF1ab 40 40 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 40 1.0 1.0 0 40 0 40 . . 0 T NC_045512.2 Early Stopgain found at refpos 5635, aminoacid position 1790 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 5707 3 stopgain ORF1ab 63 39 24 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 63 1.0 1.0 1.0 39 24 63 . . 0 T NC_045512.2 Early Stopgain found at refpos 5707, aminoacid position 1814 stopgain supported by majority of fwd and rev reads
+NC_045512.2 5713 3 stopgain ORF1ab 72 39 33 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 72 1.0 1.0 1.0 39 33 72 . . 0 T NC_045512.2 Early Stopgain found at refpos 5713, aminoacid position 1816 stopgain supported by majority of fwd and rev reads
+NC_045512.2 5737 3 stopgain ORF1ab 79 39 40 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 79 1.0 1.0 1.0 39 40 79 . . 0 T NC_045512.2 Early Stopgain found at refpos 5737, aminoacid position 1824 stopgain supported by majority of fwd and rev reads
+NC_045512.2 5740 3 stopgain ORF1ab 79 39 40 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 79 1.0 1.0 1.0 39 40 79 . . 0 T NC_045512.2 Early Stopgain found at refpos 5740, aminoacid position 1825 stopgain supported by majority of fwd and rev reads
+NC_045512.2 5752 3 stopgain ORF1ab 79 39 40 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 79 1.0 1.0 1.0 39 40 79 . . 0 T NC_045512.2 Early Stopgain found at refpos 5752, aminoacid position 1829 stopgain supported by majority of fwd and rev reads
+NC_045512.2 5773 3 stopgain ORF1ab 78 38 40 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 78 1.0 1.0 1.0 38 40 78 . . 0 T NC_045512.2 Early Stopgain found at refpos 5773, aminoacid position 1836 stopgain supported by majority of fwd and rev reads
+NC_045512.2 5788 3 stopgain ORF1ab 74 34 40 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 74 1.0 1.0 1.0 34 40 74 . . 0 T NC_045512.2 Early Stopgain found at refpos 5788, aminoacid position 1841 stopgain supported by majority of fwd and rev reads
+NC_045512.2 5911 3 stopgain ORF1ab 45 5 40 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 45 1.0 1.0 1.0 5 40 45 . . 0 T NC_045512.2 Early Stopgain found at refpos 5911, aminoacid position 1882 stopgain supported by majority of fwd and rev reads
+NC_045512.2 6043 3 stopgain ORF1ab 10 5 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 10 1.0 1.0 1.0 5 5 10 . . 0 T NC_045512.2 Early Stopgain found at refpos 6043, aminoacid position 1926 stopgain supported by majority of fwd and rev reads
+NC_045512.2 6049 3 stopgain ORF1ab 10 5 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 10 1.0 1.0 1.0 5 5 10 . . 0 T NC_045512.2 Early Stopgain found at refpos 6049, aminoacid position 1928 stopgain supported by majority of fwd and rev reads
+NC_045512.2 6061 3 stopgain ORF1ab 10 5 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 10 1.0 1.0 1.0 5 5 10 . . 0 T NC_045512.2 Early Stopgain found at refpos 6061, aminoacid position 1932 stopgain supported by majority of fwd and rev reads
+NC_045512.2 6064 3 stopgain ORF1ab 10 5 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 10 1.0 1.0 1.0 5 5 10 . . 0 T NC_045512.2 Early Stopgain found at refpos 6064, aminoacid position 1933 stopgain supported by majority of fwd and rev reads
+NC_045512.2 6079 3 stopgain ORF1ab 10 5 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 10 1.0 1.0 1.0 5 5 10 . . 0 T NC_045512.2 Early Stopgain found at refpos 6079, aminoacid position 1938 stopgain supported by majority of fwd and rev reads
+NC_045512.2 6082 3 stopgain ORF1ab 10 5 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 10 1.0 1.0 1.0 5 5 10 . . 0 T NC_045512.2 Early Stopgain found at refpos 6082, aminoacid position 1939 stopgain supported by majority of fwd and rev reads
+NC_045512.2 6106 3 stopgain ORF1ab 10 5 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 10 1.0 1.0 1.0 5 5 10 . . 0 T NC_045512.2 Early Stopgain found at refpos 6106, aminoacid position 1947 stopgain supported by majority of fwd and rev reads
+NC_045512.2 6202 3 stopgain ORF1ab 86 81 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 86 1.0 1.0 1.0 81 5 86 . . 0 T NC_045512.2 Early Stopgain found at refpos 6202, aminoacid position 1979 stopgain supported by majority of fwd and rev reads
+NC_045512.2 6214 3 stopgain ORF1ab 86 81 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 86 1.0 1.0 1.0 81 5 86 . . 0 T NC_045512.2 Early Stopgain found at refpos 6214, aminoacid position 1983 stopgain supported by majority of fwd and rev reads
+NC_045512.2 6226 3 stopgain ORF1ab 86 81 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 86 1.0 1.0 1.0 81 5 86 . . 0 T NC_045512.2 Early Stopgain found at refpos 6226, aminoacid position 1987 stopgain supported by majority of fwd and rev reads
+NC_045512.2 6247 3 stopgain ORF1ab 86 81 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 86 1.0 1.0 1.0 81 5 86 . . 0 T NC_045512.2 Early Stopgain found at refpos 6247, aminoacid position 1994 stopgain supported by majority of fwd and rev reads
+NC_045512.2 6259 3 stopgain ORF1ab 81 81 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 81 1.0 1.0 0 81 0 81 . . 0 T NC_045512.2 Early Stopgain found at refpos 6259, aminoacid position 1998 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 6262 3 stopgain ORF1ab 81 81 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 81 1.0 1.0 0 81 0 81 . . 0 T NC_045512.2 Early Stopgain found at refpos 6262, aminoacid position 1999 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 6274 3 stopgain ORF1ab 80 80 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 80 1.0 1.0 0 80 0 80 . . 0 T NC_045512.2 Early Stopgain found at refpos 6274, aminoacid position 2003 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 6322 3 stopgain ORF1ab 153 80 73 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 153 1.0 1.0 1.0 80 73 153 . . 0 T NC_045512.2 Early Stopgain found at refpos 6322, aminoacid position 2019 stopgain supported by majority of fwd and rev reads
+NC_045512.2 6340 3 stopgain ORF1ab 157 80 77 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 157 1.0 1.0 1.0 80 77 157 . . 0 T NC_045512.2 Early Stopgain found at refpos 6340, aminoacid position 2025 stopgain supported by majority of fwd and rev reads
+NC_045512.2 6376 3 stopgain ORF1ab 157 78 79 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 157 1.0 1.0 1.0 78 79 157 . . 0 T NC_045512.2 Early Stopgain found at refpos 6376, aminoacid position 2037 stopgain supported by majority of fwd and rev reads
+NC_045512.2 6409 3 stopgain ORF1ab 152 71 81 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 152 1.0 1.0 1.0 71 81 152 . . 0 T NC_045512.2 Early Stopgain found at refpos 6409, aminoacid position 2048 stopgain supported by majority of fwd and rev reads
+NC_045512.2 6451 3 stopgain ORF1ab 81 0 81 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 81 1.0 0 1.0 0 81 81 . . 0 T NC_045512.2 Early Stopgain found at refpos 6451, aminoacid position 2062 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 6457 3 stopgain ORF1ab 81 0 81 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 81 1.0 0 1.0 0 81 81 . . 0 T NC_045512.2 Early Stopgain found at refpos 6457, aminoacid position 2064 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 6496 3 stopgain ORF1ab 86 5 81 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 86 1.0 1.0 1.0 5 81 86 . . 0 T NC_045512.2 Early Stopgain found at refpos 6496, aminoacid position 2077 stopgain supported by majority of fwd and rev reads
+NC_045512.2 6508 3 stopgain ORF1ab 86 5 81 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 86 1.0 1.0 1.0 5 81 86 . . 0 T NC_045512.2 Early Stopgain found at refpos 6508, aminoacid position 2081 stopgain supported by majority of fwd and rev reads
+NC_045512.2 6511 3 stopgain ORF1ab 86 5 81 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 86 1.0 1.0 1.0 5 81 86 . . 0 T NC_045512.2 Early Stopgain found at refpos 6511, aminoacid position 2082 stopgain supported by majority of fwd and rev reads
+NC_045512.2 6655 3 stopgain ORF1ab 10 5 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 10 1.0 1.0 1.0 5 5 10 . . 0 T NC_045512.2 Early Stopgain found at refpos 6655, aminoacid position 2130 stopgain supported by majority of fwd and rev reads
+NC_045512.2 6658 3 stopgain ORF1ab 10 5 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 10 1.0 1.0 1.0 5 5 10 . . 0 T NC_045512.2 Early Stopgain found at refpos 6658, aminoacid position 2131 stopgain supported by majority of fwd and rev reads
+NC_045512.2 6682 3 stopgain ORF1ab 10 5 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 10 1.0 1.0 1.0 5 5 10 . . 0 T NC_045512.2 Early Stopgain found at refpos 6682, aminoacid position 2139 stopgain supported by majority of fwd and rev reads
+NC_045512.2 6691 3 stopgain ORF1ab 10 5 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 10 1.0 1.0 1.0 5 5 10 . . 0 T NC_045512.2 Early Stopgain found at refpos 6691, aminoacid position 2142 stopgain supported by majority of fwd and rev reads
+NC_045512.2 7342 3 stopgain ORF1ab 173 169 4 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 173 1.0 1.0 1.0 169 4 173 . . 0 T NC_045512.2 Early Stopgain found at refpos 7342, aminoacid position 2359 stopgain supported by majority of fwd and rev reads
+NC_045512.2 7345 3 stopgain ORF1ab 173 169 4 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 173 1.0 1.0 1.0 169 4 173 . . 0 T NC_045512.2 Early Stopgain found at refpos 7345, aminoacid position 2360 stopgain supported by majority of fwd and rev reads
+NC_045512.2 7372 3 stopgain ORF1ab 173 169 4 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 173 1.0 1.0 1.0 169 4 173 . . 0 T NC_045512.2 Early Stopgain found at refpos 7372, aminoacid position 2369 stopgain supported by majority of fwd and rev reads
+NC_045512.2 7408 3 stopgain ORF1ab 168 168 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 168 1.0 1.0 0 168 0 168 . . 0 T NC_045512.2 Early Stopgain found at refpos 7408, aminoacid position 2381 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 7477 3 stopgain ORF1ab 330 167 163 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 330 1.0 1.0 1.0 167 163 330 . . 0 T NC_045512.2 Early Stopgain found at refpos 7477, aminoacid position 2404 stopgain supported by majority of fwd and rev reads
+NC_045512.2 7510 3 stopgain ORF1ab 334 166 168 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 334 1.0 1.0 1.0 166 168 334 . . 0 T NC_045512.2 Early Stopgain found at refpos 7510, aminoacid position 2415 stopgain supported by majority of fwd and rev reads
+NC_045512.2 7513 3 stopgain ORF1ab 333 165 168 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 333 1.0 1.0 1.0 165 168 333 . . 0 T NC_045512.2 Early Stopgain found at refpos 7513, aminoacid position 2416 stopgain supported by majority of fwd and rev reads
+NC_045512.2 7546 3 stopgain ORF1ab 309 141 168 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 309 1.0 1.0 1.0 141 168 309 . . 0 T NC_045512.2 Early Stopgain found at refpos 7546, aminoacid position 2427 stopgain supported by majority of fwd and rev reads
+NC_045512.2 7555 3 stopgain ORF1ab 289 121 168 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 289 1.0 1.0 1.0 121 168 289 . . 0 T NC_045512.2 Early Stopgain found at refpos 7555, aminoacid position 2430 stopgain supported by majority of fwd and rev reads
+NC_045512.2 7579 3 stopgain ORF1ab 169 0 169 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 169 1.0 0 1.0 0 169 169 . . 0 T NC_045512.2 Early Stopgain found at refpos 7579, aminoacid position 2438 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 7588 3 stopgain ORF1ab 169 0 169 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 169 1.0 0 1.0 0 169 169 . . 0 T NC_045512.2 Early Stopgain found at refpos 7588, aminoacid position 2441 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 7624 3 stopgain ORF1ab 170 0 170 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 170 1.0 0 1.0 0 170 170 . . 0 T NC_045512.2 Early Stopgain found at refpos 7624, aminoacid position 2453 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 7630 3 stopgain ORF1ab 170 0 170 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 170 1.0 0 1.0 0 170 170 . . 0 T NC_045512.2 Early Stopgain found at refpos 7630, aminoacid position 2455 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 7648 3 stopgain ORF1ab 170 0 170 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 170 1.0 0 1.0 0 170 170 . . 0 T NC_045512.2 Early Stopgain found at refpos 7648, aminoacid position 2461 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 7660 3 stopgain ORF1ab 176 6 170 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 176 1.0 1.0 1.0 6 170 176 . . 0 T NC_045512.2 Early Stopgain found at refpos 7660, aminoacid position 2465 stopgain supported by majority of fwd and rev reads
+NC_045512.2 7663 3 stopgain ORF1ab 176 6 170 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 173 0.9829545454545454 1.0 0.9823529411764705 6 167 173 . . 0 T NC_045512.2 Early Stopgain found at refpos 7663, aminoacid position 2466 stopgain supported by majority of fwd and rev reads
+NC_045512.2 7666 3 stopgain ORF1ab 176 6 170 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 176 1.0 1.0 1.0 6 170 176 . . 0 T NC_045512.2 Early Stopgain found at refpos 7666, aminoacid position 2467 stopgain supported by majority of fwd and rev reads
+NC_045512.2 7780 3 stopgain ORF1ab 11 6 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 11 1.0 1.0 1.0 6 5 11 . . 0 T NC_045512.2 Early Stopgain found at refpos 7780, aminoacid position 2505 stopgain supported by majority of fwd and rev reads
+NC_045512.2 7783 3 stopgain ORF1ab 11 6 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 11 1.0 1.0 1.0 6 5 11 . . 0 T NC_045512.2 Early Stopgain found at refpos 7783, aminoacid position 2506 stopgain supported by majority of fwd and rev reads
+NC_045512.2 7804 3 stopgain ORF1ab 12 6 6 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 12 1.0 1.0 1.0 6 6 12 . . 0 T NC_045512.2 Early Stopgain found at refpos 7804, aminoacid position 2513 stopgain supported by majority of fwd and rev reads
+NC_045512.2 7831 3 stopgain ORF1ab 12 6 6 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 12 1.0 1.0 1.0 6 6 12 . . 0 T NC_045512.2 Early Stopgain found at refpos 7831, aminoacid position 2522 stopgain supported by majority of fwd and rev reads
+NC_045512.2 7852 3 stopgain ORF1ab 12 6 6 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 12 1.0 1.0 1.0 6 6 12 . . 0 T NC_045512.2 Early Stopgain found at refpos 7852, aminoacid position 2529 stopgain supported by majority of fwd and rev reads
+NC_045512.2 7855 3 stopgain ORF1ab 12 6 6 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 12 1.0 1.0 1.0 6 6 12 . . 0 T NC_045512.2 Early Stopgain found at refpos 7855, aminoacid position 2530 stopgain supported by majority of fwd and rev reads
+NC_045512.2 7861 3 stopgain ORF1ab 11 5 6 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 11 1.0 1.0 1.0 5 6 11 . . 0 T NC_045512.2 Early Stopgain found at refpos 7861, aminoacid position 2532 stopgain supported by majority of fwd and rev reads
+NC_045512.2 7999 3 stopgain ORF1ab 23 23 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 23 1.0 1.0 0 23 0 23 . . 0 T NC_045512.2 Early Stopgain found at refpos 7999, aminoacid position 2578 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 8008 3 stopgain ORF1ab 23 23 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 23 1.0 1.0 0 23 0 23 . . 0 T NC_045512.2 Early Stopgain found at refpos 8008, aminoacid position 2581 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 8011 3 stopgain ORF1ab 23 23 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 23 1.0 1.0 0 23 0 23 . . 0 T NC_045512.2 Early Stopgain found at refpos 8011, aminoacid position 2582 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 8029 3 stopgain ORF1ab 23 23 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 23 1.0 1.0 0 23 0 23 . . 0 T NC_045512.2 Early Stopgain found at refpos 8029, aminoacid position 2588 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 8038 3 stopgain ORF1ab 23 23 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 23 1.0 1.0 0 23 0 23 . . 0 T NC_045512.2 Early Stopgain found at refpos 8038, aminoacid position 2591 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 8050 3 stopgain ORF1ab 23 23 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 23 1.0 1.0 0 23 0 23 . . 0 T NC_045512.2 Early Stopgain found at refpos 8050, aminoacid position 2595 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 8071 3 stopgain ORF1ab 23 23 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 23 1.0 1.0 0 23 0 23 . . 0 T NC_045512.2 Early Stopgain found at refpos 8071, aminoacid position 2602 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 8119 3 stopgain ORF1ab 46 23 23 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 46 1.0 1.0 1.0 23 23 46 . . 0 T NC_045512.2 Early Stopgain found at refpos 8119, aminoacid position 2618 stopgain supported by majority of fwd and rev reads
+NC_045512.2 8191 3 stopgain ORF1ab 42 19 23 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 42 1.0 1.0 1.0 19 23 42 . . 0 T NC_045512.2 Early Stopgain found at refpos 8191, aminoacid position 2642 stopgain supported by majority of fwd and rev reads
+NC_045512.2 8209 3 stopgain ORF1ab 23 0 23 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 23 1.0 0 1.0 0 23 23 . . 0 T NC_045512.2 Early Stopgain found at refpos 8209, aminoacid position 2648 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 8221 3 stopgain ORF1ab 23 0 23 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 23 1.0 0 1.0 0 23 23 . . 0 T NC_045512.2 Early Stopgain found at refpos 8221, aminoacid position 2652 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 8230 3 stopgain ORF1ab 23 0 23 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 23 1.0 0 1.0 0 23 23 . . 0 T NC_045512.2 Early Stopgain found at refpos 8230, aminoacid position 2655 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 8248 3 stopgain ORF1ab 23 0 23 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 23 1.0 0 1.0 0 23 23 . . 0 T NC_045512.2 Early Stopgain found at refpos 8248, aminoacid position 2661 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 8269 3 stopgain ORF1ab 23 0 23 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 23 1.0 0 1.0 0 23 23 . . 0 T NC_045512.2 Early Stopgain found at refpos 8269, aminoacid position 2668 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 8275 3 stopgain ORF1ab 23 0 23 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 23 1.0 0 1.0 0 23 23 . . 0 T NC_045512.2 Early Stopgain found at refpos 8275, aminoacid position 2670 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 8278 3 stopgain ORF1ab 23 0 23 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 23 1.0 0 1.0 0 23 23 . . 0 T NC_045512.2 Early Stopgain found at refpos 8278, aminoacid position 2671 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 8296 3 stopgain ORF1ab 23 0 23 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 23 1.0 0 1.0 0 23 23 . . 0 T NC_045512.2 Early Stopgain found at refpos 8296, aminoacid position 2677 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 8305 3 stopgain ORF1ab 23 0 23 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 23 1.0 0 1.0 0 23 23 . . 0 T NC_045512.2 Early Stopgain found at refpos 8305, aminoacid position 2680 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 8656 3 stopgain ORF1ab 10 10 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 10 1.0 1.0 0 10 0 10 . . 0 T NC_045512.2 Early Stopgain found at refpos 8656, aminoacid position 2797 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 8665 3 stopgain ORF1ab 10 10 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 10 1.0 1.0 0 10 0 10 . . 0 T NC_045512.2 Early Stopgain found at refpos 8665, aminoacid position 2800 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 8677 3 stopgain ORF1ab 10 10 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 10 1.0 1.0 0 10 0 10 . . 0 T NC_045512.2 Early Stopgain found at refpos 8677, aminoacid position 2804 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 8701 3 stopgain ORF1ab 10 10 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 10 1.0 1.0 0 10 0 10 . . 0 T NC_045512.2 Early Stopgain found at refpos 8701, aminoacid position 2812 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 8719 3 stopgain ORF1ab 10 10 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 10 1.0 1.0 0 10 0 10 . . 0 T NC_045512.2 Early Stopgain found at refpos 8719, aminoacid position 2818 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 8740 1 deletion ORF1ab 20 10 10 10 0.5 0.5 0.5 5 5 0 0.0 0.0 0.0 0 0 0 0 0 0 0 0 10 21101 5600,5601,18800 1 T NC_045512.2 Gap of 1 nucleotide(s) found at refpos 8740 deletion supported by minority of fwd or rev reads 5%-50%; homopolymeric; neighboring indels may restore reading frame
+NC_045512.2 9791 3 stopgain ORF1ab 23 0 23 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 23 1.0 0 1.0 0 23 0 . . 0 G NC_045512.2 Early Stopgain found at refpos 9791, aminoacid position 3175, with 1 mismatches only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 18800 1 deletion ORF1ab 111 54 57 66 0.5945945945945946 0.5925925925925926 0.5964912280701754 32 34 0 0.0 0.0 0.0 0 0 0 0 0 0 0 0 45 21101 5600,5601,8740 1 A NC_045512.2 Gap of 1 nucleotide(s) found at refpos 18800 deletion supported by majority of fwd and rev reads; homopolymeric; neighboring indels may restore reading frame
+NC_045512.2 18845 3 stopgain ORF1ab 104 47 57 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 104 1.0 1.0 1.0 47 57 104 . . 0 T NC_045512.2 Early Stopgain found at refpos 18845, aminoacid position 6193 stopgain supported by majority of fwd and rev reads
+NC_045512.2 18866 3 stopgain ORF1ab 57 0 57 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 57 1.0 0 1.0 0 57 57 . . 0 T NC_045512.2 Early Stopgain found at refpos 18866, aminoacid position 6200 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 18878 3 stopgain ORF1ab 57 0 57 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 57 1.0 0 1.0 0 57 57 . . 0 T NC_045512.2 Early Stopgain found at refpos 18878, aminoacid position 6204 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 18932 3 stopgain ORF1ab 65 8 57 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 65 1.0 1.0 1.0 8 57 65 . . 0 T NC_045512.2 Early Stopgain found at refpos 18932, aminoacid position 6222 stopgain supported by majority of fwd and rev reads
+NC_045512.2 18947 3 stopgain ORF1ab 65 8 57 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 65 1.0 1.0 1.0 8 57 65 . . 0 T NC_045512.2 Early Stopgain found at refpos 18947, aminoacid position 6227 stopgain supported by majority of fwd and rev reads
+NC_045512.2 19076 3 stopgain ORF1ab 16 8 8 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 16 1.0 1.0 1.0 8 8 16 . . 0 T NC_045512.2 Early Stopgain found at refpos 19076, aminoacid position 6270 stopgain supported by majority of fwd and rev reads
+NC_045512.2 19127 3 stopgain ORF1ab 16 8 8 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 16 1.0 1.0 1.0 8 8 16 . . 0 T NC_045512.2 Early Stopgain found at refpos 19127, aminoacid position 6287 stopgain supported by majority of fwd and rev reads
+NC_045512.2 19301 3 stopgain ORF1ab 104 104 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 104 1.0 1.0 0 104 0 104 . . 0 T NC_045512.2 Early Stopgain found at refpos 19301, aminoacid position 6345 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 19355 3 stopgain ORF1ab 104 104 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 104 1.0 1.0 0 104 0 104 . . 0 T NC_045512.2 Early Stopgain found at refpos 19355, aminoacid position 6363 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 19415 3 stopgain ORF1ab 201 101 100 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 201 1.0 1.0 1.0 101 100 201 . . 0 T NC_045512.2 Early Stopgain found at refpos 19415, aminoacid position 6383 stopgain supported by majority of fwd and rev reads
+NC_045512.2 19427 3 stopgain ORF1ab 200 100 100 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 200 1.0 1.0 1.0 100 100 200 . . 0 T NC_045512.2 Early Stopgain found at refpos 19427, aminoacid position 6387 stopgain supported by majority of fwd and rev reads
+NC_045512.2 19442 3 stopgain ORF1ab 197 96 101 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 197 1.0 1.0 1.0 96 101 197 . . 0 T NC_045512.2 Early Stopgain found at refpos 19442, aminoacid position 6392 stopgain supported by majority of fwd and rev reads
+NC_045512.2 19460 3 stopgain ORF1ab 108 7 101 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 108 1.0 1.0 1.0 7 101 108 . . 0 T NC_045512.2 Early Stopgain found at refpos 19460, aminoacid position 6398 stopgain supported by majority of fwd and rev reads
+NC_045512.2 19475 3 stopgain ORF1ab 103 0 103 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 103 1.0 0 1.0 0 103 103 . . 0 T NC_045512.2 Early Stopgain found at refpos 19475, aminoacid position 6403 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 19538 3 stopgain ORF1ab 103 0 103 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 103 1.0 0 1.0 0 103 103 . . 0 T NC_045512.2 Early Stopgain found at refpos 19538, aminoacid position 6424 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 19541 3 stopgain ORF1ab 103 0 103 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 103 1.0 0 1.0 0 103 103 . . 0 T NC_045512.2 Early Stopgain found at refpos 19541, aminoacid position 6425 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 19625 3 stopgain ORF1ab 39 39 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 39 1.0 1.0 0 39 0 39 . . 0 T NC_045512.2 Early Stopgain found at refpos 19625, aminoacid position 6453 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 19649 3 stopgain ORF1ab 40 39 1 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 40 1.0 1.0 1.0 39 1 40 . . 0 T NC_045512.2 Early Stopgain found at refpos 19649, aminoacid position 6461 stopgain supported by majority of fwd and rev reads
+NC_045512.2 19739 3 stopgain ORF1ab 78 39 39 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 78 1.0 1.0 1.0 39 39 78 . . 0 T NC_045512.2 Early Stopgain found at refpos 19739, aminoacid position 6491 stopgain supported by majority of fwd and rev reads
+NC_045512.2 19778 3 stopgain ORF1ab 77 38 39 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 77 1.0 1.0 1.0 38 39 77 . . 0 T NC_045512.2 Early Stopgain found at refpos 19778, aminoacid position 6504 stopgain supported by majority of fwd and rev reads
+NC_045512.2 19826 3 stopgain ORF1ab 39 0 39 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 39 1.0 0 1.0 0 39 39 . . 0 T NC_045512.2 Early Stopgain found at refpos 19826, aminoacid position 6520 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 19871 3 stopgain ORF1ab 108 69 39 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 108 1.0 1.0 1.0 69 39 108 . . 0 T NC_045512.2 Early Stopgain found at refpos 19871, aminoacid position 6535 stopgain supported by majority of fwd and rev reads
+NC_045512.2 19931 3 stopgain ORF1ab 69 69 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 69 1.0 1.0 0 69 0 69 . . 0 T NC_045512.2 Early Stopgain found at refpos 19931, aminoacid position 6555 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 19940 3 stopgain ORF1ab 69 69 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 68 0.9855072463768116 0.9855072463768116 0 68 0 68 . . 0 T NC_045512.2 Early Stopgain found at refpos 19940, aminoacid position 6558 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 20012 3 stopgain ORF1ab 131 69 62 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 131 1.0 1.0 1.0 69 62 131 . . 0 T NC_045512.2 Early Stopgain found at refpos 20012, aminoacid position 6582 stopgain supported by majority of fwd and rev reads
+NC_045512.2 20084 3 stopgain ORF1ab 133 64 69 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 133 1.0 1.0 1.0 64 69 133 . . 0 T NC_045512.2 Early Stopgain found at refpos 20084, aminoacid position 6606 stopgain supported by majority of fwd and rev reads
+NC_045512.2 20120 3 stopgain ORF1ab 69 0 69 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 69 1.0 0 1.0 0 69 69 . . 0 T NC_045512.2 Early Stopgain found at refpos 20120, aminoacid position 6618 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 20135 3 stopgain ORF1ab 69 0 69 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 69 1.0 0 1.0 0 69 69 . . 0 T NC_045512.2 Early Stopgain found at refpos 20135, aminoacid position 6623 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 20534 3 stopgain ORF1ab 251 251 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 251 1.0 1.0 0 251 0 251 . . 0 T NC_045512.2 Early Stopgain found at refpos 20534, aminoacid position 6756 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 20537 3 stopgain ORF1ab 251 251 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 251 1.0 1.0 0 251 0 251 . . 0 T NC_045512.2 Early Stopgain found at refpos 20537, aminoacid position 6757 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 20558 3 stopgain ORF1ab 250 250 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 250 1.0 1.0 0 250 0 250 . . 0 T NC_045512.2 Early Stopgain found at refpos 20558, aminoacid position 6764 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 20579 3 stopgain ORF1ab 250 250 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 250 1.0 1.0 0 250 0 250 . . 0 T NC_045512.2 Early Stopgain found at refpos 20579, aminoacid position 6771 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 20633 3 stopgain ORF1ab 250 249 1 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 250 1.0 1.0 1.0 249 1 250 . . 0 T NC_045512.2 Early Stopgain found at refpos 20633, aminoacid position 6789 stopgain supported by majority of fwd and rev reads
+NC_045512.2 20723 3 stopgain ORF1ab 442 194 248 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 442 1.0 1.0 1.0 194 248 442 . . 0 T NC_045512.2 Early Stopgain found at refpos 20723, aminoacid position 6819 stopgain supported by majority of fwd and rev reads
+NC_045512.2 20777 3 stopgain ORF1ab 250 0 250 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 250 1.0 0 1.0 0 250 250 . . 0 T NC_045512.2 Early Stopgain found at refpos 20777, aminoacid position 6837 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 20780 3 stopgain ORF1ab 250 0 250 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 250 1.0 0 1.0 0 250 250 . . 0 T NC_045512.2 Early Stopgain found at refpos 20780, aminoacid position 6838 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 20783 3 stopgain ORF1ab 250 0 250 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 250 1.0 0 1.0 0 250 250 . . 0 T NC_045512.2 Early Stopgain found at refpos 20783, aminoacid position 6839 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 20819 3 stopgain ORF1ab 275 24 251 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 275 1.0 1.0 1.0 24 251 275 . . 0 T NC_045512.2 Early Stopgain found at refpos 20819, aminoacid position 6851 stopgain supported by majority of fwd and rev reads
+NC_045512.2 20828 3 stopgain ORF1ab 275 24 251 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 274 0.9963636363636363 1.0 0.9960159362549801 24 250 274 . . 0 T NC_045512.2 Early Stopgain found at refpos 20828, aminoacid position 6854 stopgain supported by majority of fwd and rev reads
+NC_045512.2 20834 3 stopgain ORF1ab 275 24 251 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 275 1.0 1.0 1.0 24 251 275 . . 0 T NC_045512.2 Early Stopgain found at refpos 20834, aminoacid position 6856 stopgain supported by majority of fwd and rev reads
+NC_045512.2 20852 3 stopgain ORF1ab 275 24 251 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 275 1.0 1.0 1.0 24 251 275 . . 0 T NC_045512.2 Early Stopgain found at refpos 20852, aminoacid position 6862 stopgain supported by majority of fwd and rev reads
+NC_045512.2 20912 3 stopgain ORF1ab 24 24 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 24 1.0 1.0 0 24 0 24 . . 0 T NC_045512.2 Early Stopgain found at refpos 20912, aminoacid position 6882 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 20990 3 stopgain ORF1ab 48 24 24 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 48 1.0 1.0 1.0 24 24 48 . . 0 T NC_045512.2 Early Stopgain found at refpos 20990, aminoacid position 6908 stopgain supported by majority of fwd and rev reads
+NC_045512.2 21140 3 stopgain ORF1ab 41 17 24 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 41 1.0 1.0 1.0 17 24 41 . . 0 T NC_045512.2 Early Stopgain found at refpos 21140, aminoacid position 6958 stopgain supported by majority of fwd and rev reads
+NC_045512.2 21164 3 stopgain ORF1ab 17 17 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 17 1.0 1.0 0 17 0 17 . . 0 T NC_045512.2 Early Stopgain found at refpos 21164, aminoacid position 6966 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 21170 3 stopgain ORF1ab 17 17 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 17 1.0 1.0 0 17 0 17 . . 0 T NC_045512.2 Early Stopgain found at refpos 21170, aminoacid position 6968 only fwd or rev reads available, stopgain supported by the majority of them
+NC_045512.2 21248 3 stopgain ORF1ab 34 17 17 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 34 1.0 1.0 1.0 17 17 34 . . 0 T NC_045512.2 Early Stopgain found at refpos 21248, aminoacid position 6994 stopgain supported by majority of fwd and rev reads
+NC_045512.2 21275 3 stopgain ORF1ab 34 17 17 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 34 1.0 1.0 1.0 17 17 34 . . 0 T NC_045512.2 Early Stopgain found at refpos 21275, aminoacid position 7003 stopgain supported by majority of fwd and rev reads
+NC_045512.2 21314 3 stopgain ORF1ab 31 14 17 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 31 1.0 1.0 1.0 14 17 31 . . 0 T NC_045512.2 Early Stopgain found at refpos 21314, aminoacid position 7016 stopgain supported by majority of fwd and rev reads
+NC_045512.2 21398 3 stopgain ORF1ab 21 4 17 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 21 1.0 1.0 1.0 4 17 21 . . 0 T NC_045512.2 Early Stopgain found at refpos 21398, aminoacid position 7044 stopgain supported by majority of fwd and rev reads
+NC_045512.2 21419 3 stopgain ORF1ab 21 4 17 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 21 1.0 1.0 1.0 4 17 21 . . 0 T NC_045512.2 Early Stopgain found at refpos 21419, aminoacid position 7051 stopgain supported by majority of fwd and rev reads
diff -r f079716f598c -r 029d90b0c4f6 test-data/frameshift_deletions_check_no_english.tsv
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/frameshift_deletions_check_no_english.tsv Fri Jul 14 22:07:22 2023 +0000
@@ -0,0 +1,140 @@
+ref_id start_position length VARIANT gene_region aa_position stop_mismatches stoploss_nt reads_all reads_fwd reads_rev deletions freq_del freq_del_fwd freq_del_rev deletions_fwd deletions_rev insertions freq_insert freq_insert_fwd freq_insert_rev insertions_fwd insertions_rev stops freq_stop freq_stop_fwd freq_stop_rev stops_fwd stops_rev matches_ref pos_critical_inserts pos_critical_dels homopolymeric ref_base cons_id
+NC_045512.2 5600 2 deletion ORF1ab . 0 . 40 40 0 23 0.575 0.575 0 23 0 0 0.0 0.0 0 0 0 0 0 0 0 0 0 17 21101 8740,18800 1 T NC_045512.2
+NC_045512.2 5602 3 stopgain ORF1ab 1779 0 . 40 40 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 40 1.0 1.0 0 40 0 40 . . 0 T NC_045512.2
+NC_045512.2 5635 3 stopgain ORF1ab 1790 0 . 40 40 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 40 1.0 1.0 0 40 0 40 . . 0 T NC_045512.2
+NC_045512.2 5707 3 stopgain ORF1ab 1814 0 . 63 39 24 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 63 1.0 1.0 1.0 39 24 63 . . 0 T NC_045512.2
+NC_045512.2 5713 3 stopgain ORF1ab 1816 0 . 72 39 33 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 72 1.0 1.0 1.0 39 33 72 . . 0 T NC_045512.2
+NC_045512.2 5737 3 stopgain ORF1ab 1824 0 . 79 39 40 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 79 1.0 1.0 1.0 39 40 79 . . 0 T NC_045512.2
+NC_045512.2 5740 3 stopgain ORF1ab 1825 0 . 79 39 40 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 79 1.0 1.0 1.0 39 40 79 . . 0 T NC_045512.2
+NC_045512.2 5752 3 stopgain ORF1ab 1829 0 . 79 39 40 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 79 1.0 1.0 1.0 39 40 79 . . 0 T NC_045512.2
+NC_045512.2 5773 3 stopgain ORF1ab 1836 0 . 78 38 40 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 78 1.0 1.0 1.0 38 40 78 . . 0 T NC_045512.2
+NC_045512.2 5788 3 stopgain ORF1ab 1841 0 . 74 34 40 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 74 1.0 1.0 1.0 34 40 74 . . 0 T NC_045512.2
+NC_045512.2 5911 3 stopgain ORF1ab 1882 0 . 45 5 40 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 45 1.0 1.0 1.0 5 40 45 . . 0 T NC_045512.2
+NC_045512.2 6043 3 stopgain ORF1ab 1926 0 . 10 5 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 10 1.0 1.0 1.0 5 5 10 . . 0 T NC_045512.2
+NC_045512.2 6049 3 stopgain ORF1ab 1928 0 . 10 5 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 10 1.0 1.0 1.0 5 5 10 . . 0 T NC_045512.2
+NC_045512.2 6061 3 stopgain ORF1ab 1932 0 . 10 5 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 10 1.0 1.0 1.0 5 5 10 . . 0 T NC_045512.2
+NC_045512.2 6064 3 stopgain ORF1ab 1933 0 . 10 5 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 10 1.0 1.0 1.0 5 5 10 . . 0 T NC_045512.2
+NC_045512.2 6079 3 stopgain ORF1ab 1938 0 . 10 5 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 10 1.0 1.0 1.0 5 5 10 . . 0 T NC_045512.2
+NC_045512.2 6082 3 stopgain ORF1ab 1939 0 . 10 5 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 10 1.0 1.0 1.0 5 5 10 . . 0 T NC_045512.2
+NC_045512.2 6106 3 stopgain ORF1ab 1947 0 . 10 5 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 10 1.0 1.0 1.0 5 5 10 . . 0 T NC_045512.2
+NC_045512.2 6202 3 stopgain ORF1ab 1979 0 . 86 81 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 86 1.0 1.0 1.0 81 5 86 . . 0 T NC_045512.2
+NC_045512.2 6214 3 stopgain ORF1ab 1983 0 . 86 81 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 86 1.0 1.0 1.0 81 5 86 . . 0 T NC_045512.2
+NC_045512.2 6226 3 stopgain ORF1ab 1987 0 . 86 81 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 86 1.0 1.0 1.0 81 5 86 . . 0 T NC_045512.2
+NC_045512.2 6247 3 stopgain ORF1ab 1994 0 . 86 81 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 86 1.0 1.0 1.0 81 5 86 . . 0 T NC_045512.2
+NC_045512.2 6259 3 stopgain ORF1ab 1998 0 . 81 81 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 81 1.0 1.0 0 81 0 81 . . 0 T NC_045512.2
+NC_045512.2 6262 3 stopgain ORF1ab 1999 0 . 81 81 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 81 1.0 1.0 0 81 0 81 . . 0 T NC_045512.2
+NC_045512.2 6274 3 stopgain ORF1ab 2003 0 . 80 80 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 80 1.0 1.0 0 80 0 80 . . 0 T NC_045512.2
+NC_045512.2 6322 3 stopgain ORF1ab 2019 0 . 153 80 73 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 153 1.0 1.0 1.0 80 73 153 . . 0 T NC_045512.2
+NC_045512.2 6340 3 stopgain ORF1ab 2025 0 . 157 80 77 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 157 1.0 1.0 1.0 80 77 157 . . 0 T NC_045512.2
+NC_045512.2 6376 3 stopgain ORF1ab 2037 0 . 157 78 79 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 157 1.0 1.0 1.0 78 79 157 . . 0 T NC_045512.2
+NC_045512.2 6409 3 stopgain ORF1ab 2048 0 . 152 71 81 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 152 1.0 1.0 1.0 71 81 152 . . 0 T NC_045512.2
+NC_045512.2 6451 3 stopgain ORF1ab 2062 0 . 81 0 81 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 81 1.0 0 1.0 0 81 81 . . 0 T NC_045512.2
+NC_045512.2 6457 3 stopgain ORF1ab 2064 0 . 81 0 81 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 81 1.0 0 1.0 0 81 81 . . 0 T NC_045512.2
+NC_045512.2 6496 3 stopgain ORF1ab 2077 0 . 86 5 81 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 86 1.0 1.0 1.0 5 81 86 . . 0 T NC_045512.2
+NC_045512.2 6508 3 stopgain ORF1ab 2081 0 . 86 5 81 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 86 1.0 1.0 1.0 5 81 86 . . 0 T NC_045512.2
+NC_045512.2 6511 3 stopgain ORF1ab 2082 0 . 86 5 81 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 86 1.0 1.0 1.0 5 81 86 . . 0 T NC_045512.2
+NC_045512.2 6655 3 stopgain ORF1ab 2130 0 . 10 5 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 10 1.0 1.0 1.0 5 5 10 . . 0 T NC_045512.2
+NC_045512.2 6658 3 stopgain ORF1ab 2131 0 . 10 5 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 10 1.0 1.0 1.0 5 5 10 . . 0 T NC_045512.2
+NC_045512.2 6682 3 stopgain ORF1ab 2139 0 . 10 5 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 10 1.0 1.0 1.0 5 5 10 . . 0 T NC_045512.2
+NC_045512.2 6691 3 stopgain ORF1ab 2142 0 . 10 5 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 10 1.0 1.0 1.0 5 5 10 . . 0 T NC_045512.2
+NC_045512.2 7342 3 stopgain ORF1ab 2359 0 . 173 169 4 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 173 1.0 1.0 1.0 169 4 173 . . 0 T NC_045512.2
+NC_045512.2 7345 3 stopgain ORF1ab 2360 0 . 173 169 4 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 173 1.0 1.0 1.0 169 4 173 . . 0 T NC_045512.2
+NC_045512.2 7372 3 stopgain ORF1ab 2369 0 . 173 169 4 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 173 1.0 1.0 1.0 169 4 173 . . 0 T NC_045512.2
+NC_045512.2 7408 3 stopgain ORF1ab 2381 0 . 168 168 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 168 1.0 1.0 0 168 0 168 . . 0 T NC_045512.2
+NC_045512.2 7477 3 stopgain ORF1ab 2404 0 . 330 167 163 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 330 1.0 1.0 1.0 167 163 330 . . 0 T NC_045512.2
+NC_045512.2 7510 3 stopgain ORF1ab 2415 0 . 334 166 168 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 334 1.0 1.0 1.0 166 168 334 . . 0 T NC_045512.2
+NC_045512.2 7513 3 stopgain ORF1ab 2416 0 . 333 165 168 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 333 1.0 1.0 1.0 165 168 333 . . 0 T NC_045512.2
+NC_045512.2 7546 3 stopgain ORF1ab 2427 0 . 309 141 168 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 309 1.0 1.0 1.0 141 168 309 . . 0 T NC_045512.2
+NC_045512.2 7555 3 stopgain ORF1ab 2430 0 . 289 121 168 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 289 1.0 1.0 1.0 121 168 289 . . 0 T NC_045512.2
+NC_045512.2 7579 3 stopgain ORF1ab 2438 0 . 169 0 169 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 169 1.0 0 1.0 0 169 169 . . 0 T NC_045512.2
+NC_045512.2 7588 3 stopgain ORF1ab 2441 0 . 169 0 169 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 169 1.0 0 1.0 0 169 169 . . 0 T NC_045512.2
+NC_045512.2 7624 3 stopgain ORF1ab 2453 0 . 170 0 170 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 170 1.0 0 1.0 0 170 170 . . 0 T NC_045512.2
+NC_045512.2 7630 3 stopgain ORF1ab 2455 0 . 170 0 170 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 170 1.0 0 1.0 0 170 170 . . 0 T NC_045512.2
+NC_045512.2 7648 3 stopgain ORF1ab 2461 0 . 170 0 170 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 170 1.0 0 1.0 0 170 170 . . 0 T NC_045512.2
+NC_045512.2 7660 3 stopgain ORF1ab 2465 0 . 176 6 170 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 176 1.0 1.0 1.0 6 170 176 . . 0 T NC_045512.2
+NC_045512.2 7663 3 stopgain ORF1ab 2466 0 . 176 6 170 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 173 0.9829545454545454 1.0 0.9823529411764705 6 167 173 . . 0 T NC_045512.2
+NC_045512.2 7666 3 stopgain ORF1ab 2467 0 . 176 6 170 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 176 1.0 1.0 1.0 6 170 176 . . 0 T NC_045512.2
+NC_045512.2 7780 3 stopgain ORF1ab 2505 0 . 11 6 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 11 1.0 1.0 1.0 6 5 11 . . 0 T NC_045512.2
+NC_045512.2 7783 3 stopgain ORF1ab 2506 0 . 11 6 5 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 11 1.0 1.0 1.0 6 5 11 . . 0 T NC_045512.2
+NC_045512.2 7804 3 stopgain ORF1ab 2513 0 . 12 6 6 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 12 1.0 1.0 1.0 6 6 12 . . 0 T NC_045512.2
+NC_045512.2 7831 3 stopgain ORF1ab 2522 0 . 12 6 6 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 12 1.0 1.0 1.0 6 6 12 . . 0 T NC_045512.2
+NC_045512.2 7852 3 stopgain ORF1ab 2529 0 . 12 6 6 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 12 1.0 1.0 1.0 6 6 12 . . 0 T NC_045512.2
+NC_045512.2 7855 3 stopgain ORF1ab 2530 0 . 12 6 6 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 12 1.0 1.0 1.0 6 6 12 . . 0 T NC_045512.2
+NC_045512.2 7861 3 stopgain ORF1ab 2532 0 . 11 5 6 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 11 1.0 1.0 1.0 5 6 11 . . 0 T NC_045512.2
+NC_045512.2 7999 3 stopgain ORF1ab 2578 0 . 23 23 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 23 1.0 1.0 0 23 0 23 . . 0 T NC_045512.2
+NC_045512.2 8008 3 stopgain ORF1ab 2581 0 . 23 23 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 23 1.0 1.0 0 23 0 23 . . 0 T NC_045512.2
+NC_045512.2 8011 3 stopgain ORF1ab 2582 0 . 23 23 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 23 1.0 1.0 0 23 0 23 . . 0 T NC_045512.2
+NC_045512.2 8029 3 stopgain ORF1ab 2588 0 . 23 23 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 23 1.0 1.0 0 23 0 23 . . 0 T NC_045512.2
+NC_045512.2 8038 3 stopgain ORF1ab 2591 0 . 23 23 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 23 1.0 1.0 0 23 0 23 . . 0 T NC_045512.2
+NC_045512.2 8050 3 stopgain ORF1ab 2595 0 . 23 23 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 23 1.0 1.0 0 23 0 23 . . 0 T NC_045512.2
+NC_045512.2 8071 3 stopgain ORF1ab 2602 0 . 23 23 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 23 1.0 1.0 0 23 0 23 . . 0 T NC_045512.2
+NC_045512.2 8119 3 stopgain ORF1ab 2618 0 . 46 23 23 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 46 1.0 1.0 1.0 23 23 46 . . 0 T NC_045512.2
+NC_045512.2 8191 3 stopgain ORF1ab 2642 0 . 42 19 23 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 42 1.0 1.0 1.0 19 23 42 . . 0 T NC_045512.2
+NC_045512.2 8209 3 stopgain ORF1ab 2648 0 . 23 0 23 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 23 1.0 0 1.0 0 23 23 . . 0 T NC_045512.2
+NC_045512.2 8221 3 stopgain ORF1ab 2652 0 . 23 0 23 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 23 1.0 0 1.0 0 23 23 . . 0 T NC_045512.2
+NC_045512.2 8230 3 stopgain ORF1ab 2655 0 . 23 0 23 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 23 1.0 0 1.0 0 23 23 . . 0 T NC_045512.2
+NC_045512.2 8248 3 stopgain ORF1ab 2661 0 . 23 0 23 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 23 1.0 0 1.0 0 23 23 . . 0 T NC_045512.2
+NC_045512.2 8269 3 stopgain ORF1ab 2668 0 . 23 0 23 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 23 1.0 0 1.0 0 23 23 . . 0 T NC_045512.2
+NC_045512.2 8275 3 stopgain ORF1ab 2670 0 . 23 0 23 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 23 1.0 0 1.0 0 23 23 . . 0 T NC_045512.2
+NC_045512.2 8278 3 stopgain ORF1ab 2671 0 . 23 0 23 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 23 1.0 0 1.0 0 23 23 . . 0 T NC_045512.2
+NC_045512.2 8296 3 stopgain ORF1ab 2677 0 . 23 0 23 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 23 1.0 0 1.0 0 23 23 . . 0 T NC_045512.2
+NC_045512.2 8305 3 stopgain ORF1ab 2680 0 . 23 0 23 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 23 1.0 0 1.0 0 23 23 . . 0 T NC_045512.2
+NC_045512.2 8656 3 stopgain ORF1ab 2797 0 . 10 10 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 10 1.0 1.0 0 10 0 10 . . 0 T NC_045512.2
+NC_045512.2 8665 3 stopgain ORF1ab 2800 0 . 10 10 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 10 1.0 1.0 0 10 0 10 . . 0 T NC_045512.2
+NC_045512.2 8677 3 stopgain ORF1ab 2804 0 . 10 10 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 10 1.0 1.0 0 10 0 10 . . 0 T NC_045512.2
+NC_045512.2 8701 3 stopgain ORF1ab 2812 0 . 10 10 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 10 1.0 1.0 0 10 0 10 . . 0 T NC_045512.2
+NC_045512.2 8719 3 stopgain ORF1ab 2818 0 . 10 10 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 10 1.0 1.0 0 10 0 10 . . 0 T NC_045512.2
+NC_045512.2 8740 1 deletion ORF1ab . 0 . 20 10 10 10 0.5 0.5 0.5 5 5 0 0.0 0.0 0.0 0 0 0 0 0 0 0 0 10 21101 5600,5601,18800 1 T NC_045512.2
+NC_045512.2 9791 3 stopgain ORF1ab 3175 1 . 23 0 23 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 23 1.0 0 1.0 0 23 0 . . 0 G NC_045512.2
+NC_045512.2 18800 1 deletion ORF1ab . 0 . 111 54 57 66 0.5945945945945946 0.5925925925925926 0.5964912280701754 32 34 0 0.0 0.0 0.0 0 0 0 0 0 0 0 0 45 21101 5600,5601,8740 1 A NC_045512.2
+NC_045512.2 18845 3 stopgain ORF1ab 6193 0 . 104 47 57 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 104 1.0 1.0 1.0 47 57 104 . . 0 T NC_045512.2
+NC_045512.2 18866 3 stopgain ORF1ab 6200 0 . 57 0 57 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 57 1.0 0 1.0 0 57 57 . . 0 T NC_045512.2
+NC_045512.2 18878 3 stopgain ORF1ab 6204 0 . 57 0 57 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 57 1.0 0 1.0 0 57 57 . . 0 T NC_045512.2
+NC_045512.2 18932 3 stopgain ORF1ab 6222 0 . 65 8 57 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 65 1.0 1.0 1.0 8 57 65 . . 0 T NC_045512.2
+NC_045512.2 18947 3 stopgain ORF1ab 6227 0 . 65 8 57 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 65 1.0 1.0 1.0 8 57 65 . . 0 T NC_045512.2
+NC_045512.2 19076 3 stopgain ORF1ab 6270 0 . 16 8 8 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 16 1.0 1.0 1.0 8 8 16 . . 0 T NC_045512.2
+NC_045512.2 19127 3 stopgain ORF1ab 6287 0 . 16 8 8 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 16 1.0 1.0 1.0 8 8 16 . . 0 T NC_045512.2
+NC_045512.2 19301 3 stopgain ORF1ab 6345 0 . 104 104 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 104 1.0 1.0 0 104 0 104 . . 0 T NC_045512.2
+NC_045512.2 19355 3 stopgain ORF1ab 6363 0 . 104 104 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 104 1.0 1.0 0 104 0 104 . . 0 T NC_045512.2
+NC_045512.2 19415 3 stopgain ORF1ab 6383 0 . 201 101 100 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 201 1.0 1.0 1.0 101 100 201 . . 0 T NC_045512.2
+NC_045512.2 19427 3 stopgain ORF1ab 6387 0 . 200 100 100 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 200 1.0 1.0 1.0 100 100 200 . . 0 T NC_045512.2
+NC_045512.2 19442 3 stopgain ORF1ab 6392 0 . 197 96 101 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 197 1.0 1.0 1.0 96 101 197 . . 0 T NC_045512.2
+NC_045512.2 19460 3 stopgain ORF1ab 6398 0 . 108 7 101 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 108 1.0 1.0 1.0 7 101 108 . . 0 T NC_045512.2
+NC_045512.2 19475 3 stopgain ORF1ab 6403 0 . 103 0 103 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 103 1.0 0 1.0 0 103 103 . . 0 T NC_045512.2
+NC_045512.2 19538 3 stopgain ORF1ab 6424 0 . 103 0 103 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 103 1.0 0 1.0 0 103 103 . . 0 T NC_045512.2
+NC_045512.2 19541 3 stopgain ORF1ab 6425 0 . 103 0 103 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 103 1.0 0 1.0 0 103 103 . . 0 T NC_045512.2
+NC_045512.2 19625 3 stopgain ORF1ab 6453 0 . 39 39 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 39 1.0 1.0 0 39 0 39 . . 0 T NC_045512.2
+NC_045512.2 19649 3 stopgain ORF1ab 6461 0 . 40 39 1 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 40 1.0 1.0 1.0 39 1 40 . . 0 T NC_045512.2
+NC_045512.2 19739 3 stopgain ORF1ab 6491 0 . 78 39 39 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 78 1.0 1.0 1.0 39 39 78 . . 0 T NC_045512.2
+NC_045512.2 19778 3 stopgain ORF1ab 6504 0 . 77 38 39 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 77 1.0 1.0 1.0 38 39 77 . . 0 T NC_045512.2
+NC_045512.2 19826 3 stopgain ORF1ab 6520 0 . 39 0 39 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 39 1.0 0 1.0 0 39 39 . . 0 T NC_045512.2
+NC_045512.2 19871 3 stopgain ORF1ab 6535 0 . 108 69 39 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 108 1.0 1.0 1.0 69 39 108 . . 0 T NC_045512.2
+NC_045512.2 19931 3 stopgain ORF1ab 6555 0 . 69 69 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 69 1.0 1.0 0 69 0 69 . . 0 T NC_045512.2
+NC_045512.2 19940 3 stopgain ORF1ab 6558 0 . 69 69 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 68 0.9855072463768116 0.9855072463768116 0 68 0 68 . . 0 T NC_045512.2
+NC_045512.2 20012 3 stopgain ORF1ab 6582 0 . 131 69 62 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 131 1.0 1.0 1.0 69 62 131 . . 0 T NC_045512.2
+NC_045512.2 20084 3 stopgain ORF1ab 6606 0 . 133 64 69 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 133 1.0 1.0 1.0 64 69 133 . . 0 T NC_045512.2
+NC_045512.2 20120 3 stopgain ORF1ab 6618 0 . 69 0 69 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 69 1.0 0 1.0 0 69 69 . . 0 T NC_045512.2
+NC_045512.2 20135 3 stopgain ORF1ab 6623 0 . 69 0 69 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 69 1.0 0 1.0 0 69 69 . . 0 T NC_045512.2
+NC_045512.2 20534 3 stopgain ORF1ab 6756 0 . 251 251 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 251 1.0 1.0 0 251 0 251 . . 0 T NC_045512.2
+NC_045512.2 20537 3 stopgain ORF1ab 6757 0 . 251 251 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 251 1.0 1.0 0 251 0 251 . . 0 T NC_045512.2
+NC_045512.2 20558 3 stopgain ORF1ab 6764 0 . 250 250 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 250 1.0 1.0 0 250 0 250 . . 0 T NC_045512.2
+NC_045512.2 20579 3 stopgain ORF1ab 6771 0 . 250 250 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 250 1.0 1.0 0 250 0 250 . . 0 T NC_045512.2
+NC_045512.2 20633 3 stopgain ORF1ab 6789 0 . 250 249 1 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 250 1.0 1.0 1.0 249 1 250 . . 0 T NC_045512.2
+NC_045512.2 20723 3 stopgain ORF1ab 6819 0 . 442 194 248 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 442 1.0 1.0 1.0 194 248 442 . . 0 T NC_045512.2
+NC_045512.2 20777 3 stopgain ORF1ab 6837 0 . 250 0 250 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 250 1.0 0 1.0 0 250 250 . . 0 T NC_045512.2
+NC_045512.2 20780 3 stopgain ORF1ab 6838 0 . 250 0 250 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 250 1.0 0 1.0 0 250 250 . . 0 T NC_045512.2
+NC_045512.2 20783 3 stopgain ORF1ab 6839 0 . 250 0 250 0 0.0 0 0.0 0 0 0 0.0 0 0.0 0 0 250 1.0 0 1.0 0 250 250 . . 0 T NC_045512.2
+NC_045512.2 20819 3 stopgain ORF1ab 6851 0 . 275 24 251 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 275 1.0 1.0 1.0 24 251 275 . . 0 T NC_045512.2
+NC_045512.2 20828 3 stopgain ORF1ab 6854 0 . 275 24 251 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 274 0.9963636363636363 1.0 0.9960159362549801 24 250 274 . . 0 T NC_045512.2
+NC_045512.2 20834 3 stopgain ORF1ab 6856 0 . 275 24 251 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 275 1.0 1.0 1.0 24 251 275 . . 0 T NC_045512.2
+NC_045512.2 20852 3 stopgain ORF1ab 6862 0 . 275 24 251 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 275 1.0 1.0 1.0 24 251 275 . . 0 T NC_045512.2
+NC_045512.2 20912 3 stopgain ORF1ab 6882 0 . 24 24 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 24 1.0 1.0 0 24 0 24 . . 0 T NC_045512.2
+NC_045512.2 20990 3 stopgain ORF1ab 6908 0 . 48 24 24 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 48 1.0 1.0 1.0 24 24 48 . . 0 T NC_045512.2
+NC_045512.2 21140 3 stopgain ORF1ab 6958 0 . 41 17 24 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 41 1.0 1.0 1.0 17 24 41 . . 0 T NC_045512.2
+NC_045512.2 21164 3 stopgain ORF1ab 6966 0 . 17 17 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 17 1.0 1.0 0 17 0 17 . . 0 T NC_045512.2
+NC_045512.2 21170 3 stopgain ORF1ab 6968 0 . 17 17 0 0 0.0 0.0 0 0 0 0 0.0 0.0 0 0 0 17 1.0 1.0 0 17 0 17 . . 0 T NC_045512.2
+NC_045512.2 21248 3 stopgain ORF1ab 6994 0 . 34 17 17 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 34 1.0 1.0 1.0 17 17 34 . . 0 T NC_045512.2
+NC_045512.2 21275 3 stopgain ORF1ab 7003 0 . 34 17 17 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 34 1.0 1.0 1.0 17 17 34 . . 0 T NC_045512.2
+NC_045512.2 21314 3 stopgain ORF1ab 7016 0 . 31 14 17 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 31 1.0 1.0 1.0 14 17 31 . . 0 T NC_045512.2
+NC_045512.2 21398 3 stopgain ORF1ab 7044 0 . 21 4 17 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 21 1.0 1.0 1.0 4 17 21 . . 0 T NC_045512.2
+NC_045512.2 21419 3 stopgain ORF1ab 7051 0 . 21 4 17 0 0.0 0.0 0.0 0 0 0 0.0 0.0 0.0 0 0 21 1.0 1.0 1.0 4 17 21 . . 0 T NC_045512.2