comparison macros.xml @ 12:fa016f1eea1a draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/snippy commit 7dec701af24e00b3328459f0a823eefd461237bb"

11:5bbf9eada9c2

<macros>
    <xml name="requirements">
        <requirements>
            <requirement type="package" version="@VERSION@">snippy</requirement>
            <requirement type="package" version="1.32">tar</requirement>
            <yield />
        </requirements>
    </xml>

    <xml name="version_command">
        <version_command><![CDATA[snippy --version]]></version_command>
    </xml>

                        <validator type="no_options" message="No reference genomes are available" />
                    </options>
                </param>
            </when>
            <when value="history">
                <param name="ref_file" type="data" format="fasta,genbank" label="Use the following dataset as the reference sequence" help="You can upload a FASTA or FASTQ sequence to the history and use it as reference" />
            </when>
        </conditional>
    </xml>

    <token name="@VERSION@">4.5.0</token>

    <xml name="citations">
      <citations>
          <citation type="bibtex">@UNPUBLISHED{Seemann2013,
              author = "Seemann T",

12:fa016f1eea1a

<macros>
    <xml name="requirements">
        <requirements>
            <requirement type="package" version="@WRAPPER_VERSION@">snippy</requirement>
            <requirement type="package" version="1.32">tar</requirement>
            <yield />
        </requirements>
    </xml>

    <token name="@WRAPPER_VERSION@">4.5.0</token>
    <token name="@VERSION_SUFFIX@">1</token>

    <xml name="version_command">
        <version_command><![CDATA[snippy --version]]></version_command>
    </xml>

                        <validator type="no_options" message="No reference genomes are available" />
                    </options>
                </param>
            </when>
            <when value="history">
                <param name="ref_file" type="data" format="fasta,fasta.gz,genbank" label="Use the following dataset as the reference sequence" help="You can upload a FASTA or FASTQ sequence to the history and use it as reference" />
            </when>
        </conditional>
    </xml>

    <xml name="citations">
      <citations>
          <citation type="bibtex">@UNPUBLISHED{Seemann2013,
              author = "Seemann T",