Mercurial > repos > iuc > snippy
diff test-data/fna_ref/snps.gff @ 2:776ebd1239da draft
planemo upload commit dcedcb76831fd639d1468a308a78ac359ecd2496
| author | iuc |
|---|---|
| date | Mon, 18 Mar 2019 10:59:29 -0400 |
| parents | 82f2b6f20fa2 |
| children |
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--- a/test-data/fna_ref/snps.gff Sat Jan 26 14:36:48 2019 -0500 +++ b/test-data/fna_ref/snps.gff Mon Mar 18 10:59:29 2019 -0400 @@ -1,17 +1,16 @@ ##gff-version 3 -Wildtype snippy:3.2-dev variation 24388 24388 . . 0 note=snp A=>G G:22 A:0 -Wildtype snippy:3.2-dev variation 29479 29479 . . 0 note=snp T=>G G:21 T:0 -Wildtype snippy:3.2-dev variation 47299 47299 . . 0 note=snp T=>A A:25 T:0 -Wildtype snippy:3.2-dev variation 102969 102969 . . 0 note=snp G=>C C:16 G:0 -Wildtype snippy:3.2-dev variation 103048 103048 . . 0 note=snp T=>A A:21 T:0 -Wildtype snippy:3.2-dev variation 103379 103379 . . 0 note=del GAAAATAG=>GAAATAG GAAATAG:11 GAAAATAG:0 -Wildtype snippy:3.2-dev variation 106602 106602 . . 0 note=snp T=>G G:22 T:0 -Wildtype snippy:3.2-dev variation 106722 106722 . . 0 note=ins GTTTTTAAC=>GTTTTTTAAC GTTTTTTAAC:11 GTTTTTAAC:0 -Wildtype snippy:3.2-dev variation 109833 109833 . . 0 note=snp T=>A A:17 T:0 -Wildtype snippy:3.2-dev variation 114540 114540 . . 0 note=del ATTGTGA=>ATGTGA ATGTGA:26 ATTGTGA:0 -Wildtype snippy:3.2-dev variation 129881 129881 . . 0 note=mnp GT=>AA AA:19 GT:0 -Wildtype snippy:3.2-dev variation 138877 138877 . . 0 note=snp G=>C C:14 G:0 -Wildtype snippy:3.2-dev variation 138920 138920 . . 0 note=snp A=>G G:10 A:0 -Wildtype snippy:3.2-dev variation 138954 138954 . . 0 note=snp A=>G G:10 A:0 -Wildtype snippy:3.2-dev variation 160547 160547 . . 0 note=del GTC=>GC GC:18 GTC:0 -Wildtype snippy:3.2-dev variation 190866 190866 . . 0 note=del GTTTTCTTTAA=>GTTTCTTTAA GTTTCTTTAA:17 GTTTTCTTTAA:0 +Wildtype snippy:4.3.6 variation 24388 24388 . . 0 note=snp A=>G G:22 A:0 +Wildtype snippy:4.3.6 variation 29479 29479 . . 0 note=snp T=>G G:21 T:0 +Wildtype snippy:4.3.6 variation 47299 47299 . . 0 note=snp T=>A A:25 T:0 +Wildtype snippy:4.3.6 variation 102969 102969 . . 0 note=snp G=>C C:18 G:0 +Wildtype snippy:4.3.6 variation 103048 103048 . . 0 note=snp T=>A A:23 T:0 +Wildtype snippy:4.3.6 variation 103379 103379 . . 0 note=del GA=>G G:9 GA:0 +Wildtype snippy:4.3.6 variation 106602 106602 . . 0 note=snp T=>G G:22 T:0 +Wildtype snippy:4.3.6 variation 106722 106722 . . 0 note=ins G=>GT GT:11 G:0 +Wildtype snippy:4.3.6 variation 109833 109833 . . 0 note=snp T=>A A:17 T:0 +Wildtype snippy:4.3.6 variation 114540 114540 . . 0 note=del AT=>A A:26 AT:0 +Wildtype snippy:4.3.6 variation 129881 129881 . . 0 note=mnp GT=>AA AA:19 GT:0 +Wildtype snippy:4.3.6 variation 138877 138877 . . 0 note=snp G=>C C:14 G:0 +Wildtype snippy:4.3.6 variation 138954 138954 . . 0 note=snp A=>G G:10 A:0 +Wildtype snippy:4.3.6 variation 160547 160547 . . 0 note=del GT=>G G:19 GT:0 +Wildtype snippy:4.3.6 variation 190866 190866 . . 0 note=del GT=>G G:17 GT:0 \ No newline at end of file