Mercurial > repos > iuc > snp_sites

annotate test-data/output.vcf @ 0:efe8f0e53d3e draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/snp-sites commit 3a0370239dd8ee753194be5c580b1d9b8ec98bee
author iuc
date Fri, 30 Jun 2017 16:43:26 -0400
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Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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0
efe8f0e53d3e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/snp-sites commit 3a0370239dd8ee753194be5c580b1d9b8ec98bee
iuc
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diff changeset
1 ##fileformat=VCFv4.1
efe8f0e53d3e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/snp-sites commit 3a0370239dd8ee753194be5c580b1d9b8ec98bee
iuc
parents:
diff changeset
2 ##contig=<ID=1,length=12>
efe8f0e53d3e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/snp-sites commit 3a0370239dd8ee753194be5c580b1d9b8ec98bee
iuc
parents:
diff changeset
3 ##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
efe8f0e53d3e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/snp-sites commit 3a0370239dd8ee753194be5c580b1d9b8ec98bee
iuc
parents:
diff changeset
4 #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT sample1 sample1 sample1
efe8f0e53d3e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/snp-sites commit 3a0370239dd8ee753194be5c580b1d9b8ec98bee
iuc
parents:
diff changeset
5 1 2 . G A . . . GT 0 0 1
efe8f0e53d3e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/snp-sites commit 3a0370239dd8ee753194be5c580b1d9b8ec98bee
iuc
parents:
diff changeset
6 1 5 . A G . . . GT 0 0 1
efe8f0e53d3e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/snp-sites commit 3a0370239dd8ee753194be5c580b1d9b8ec98bee
iuc
parents:
diff changeset
7 1 8 . G *,T . . . GT 0 1 2