comparison snpEff_download.xml @ 30:c7275bd8b4d6 draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/snpeff commit 280d5247becaa9a70db9c5c4a2f1fc50d302838a

29:ca2b512e8d7c

<tool id="snpEff_download" name="SnpEff download:" version="@SNPEFF_VERSION@+galaxy@WRAPPER_VERSION@" profile="23.0">
    <description> download a pre-built database</description>
    <macros>
        <import>snpEff_macros.xml</import>
    </macros>
    <requirements>

        <param name="genome_version" type="text" value="" label="Select the annotation database you want to download (e.g. GRCh38.86, mm10 etc.)" help="The list of available databases can be obtained with 'SnpEff databases' tool">
            <validator type="empty_field" message="A genome version name is required" />
        </param>
    </inputs>
    <outputs>
        <data name="snpeff_db" format="snpeffdb" label="${tool.name} @SNPEFF_VERSION@ ${genome_version}"/>
    </outputs>
    <tests>
        <test>
            <param name="genome_version" value="ebola_zaire"/>
            <output name="snpeff_db">

30:c7275bd8b4d6

<tool id="snpEff_download" name="SnpEff download:" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="23.0">
    <description> download a pre-built database</description>
    <macros>
        <import>snpEff_macros.xml</import>
    </macros>
    <requirements>

        <param name="genome_version" type="text" value="" label="Select the annotation database you want to download (e.g. GRCh38.86, mm10 etc.)" help="The list of available databases can be obtained with 'SnpEff databases' tool">
            <validator type="empty_field" message="A genome version name is required" />
        </param>
    </inputs>
    <outputs>
        <data name="snpeff_db" format="snpeffdb" label="@SNPEFF_VERSION@ ${genome_version} database"/>
    </outputs>
    <tests>
        <test>
            <param name="genome_version" value="ebola_zaire"/>
            <output name="snpeff_db">