Mercurial > repos > iuc > snpeff

diff readme.rst @ 7:7adfd0589f49 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/snpeff commit 5c6d595ecbf2e4e39c25662a165c9e475e01ecd1
author iuc
date Tue, 18 Apr 2017 09:33:56 -0400
parents 500832f27cbc
children ce135864629c
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--- a/readme.rst	Mon Dec 19 11:56:53 2016 -0500
+++ b/readme.rst	Tue Apr 18 09:33:56 2017 -0400
@@ -6,14 +6,6 @@
 
 .. _SnpEff: http://snpeff.sourceforge.net/
 
-
-This repository let you automatically install SnpEff and SnpSift.
-This will use the default location for genome reference downloads from the ``snpEff.config`` file:
-
-  data_dir = ~/snpEff/data/
-
-You can manually edit the installed ``snpEff.config`` file and change the location, or you can create a symbolic link to the desired data location from ``~/snpEff``.
-
 The genome reference options used by the tools "SnpEff" (snpEff.xml) and "SnpEff Download" (snpEff_download.xml) are taken from the ``tool-data/snpeffect_genomedb.loc`` file.
 You can fill this file by running the following command:
 
@@ -35,4 +27,3 @@
 .. _Cingolani2012using: http://journal.frontiersin.org/Journal/10.3389/fgene.2012.00035/
 
 Wrapper authors: Jim Johnson
-