comparison snpeff.py @ 1:2b53f59de80c draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/datatypes/snpeff_datatypes commit e511f2e85cd3d39f34fc0ed6e0ea5bc7b9a11e9e

0:d78b2b2a3388

    MetadataElement( name="annotation", default=[], desc="Annotation Names", readonly=True, visible=True, no_value=[], optional=True)

    def __init__( self, **kwd ):
        Text.__init__( self, **kwd )

    "" The SnpEff version line was added in SnpEff version 4.1 
    def getSnpeffVersionFromFile(self, path):
        snpeff_version = None
        try:
            fh = gzip.open(path, 'rb')
            buf = fh.read(100)

1:2b53f59de80c

    MetadataElement( name="annotation", default=[], desc="Annotation Names", readonly=True, visible=True, no_value=[], optional=True)

    def __init__( self, **kwd ):
        Text.__init__( self, **kwd )

    # The SnpEff version line was added in SnpEff version 4.1 
    def getSnpeffVersionFromFile(self, path):
        snpeff_version = None
        try:
            fh = gzip.open(path, 'rb')
            buf = fh.read(100)