Mercurial > repos > iuc > spades_metaplasmidspades
comparison metaplasmidspades.xml @ 5:21da31ed41a1 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/spades commit a09a5e3ee3c76550526f082b97de8da75181a1dd
| author | iuc |
|---|---|
| date | Wed, 13 Jul 2022 07:43:38 +0000 |
| parents | 32ab23671cc1 |
| children | 4a01e0d2892c |
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| 4:6b5a5842531e | 5:21da31ed41a1 |
|---|---|
| 118 <has_text_matching expression=">NODE\_1\_length\_9645\_cov\_.+"/> | 118 <has_text_matching expression=">NODE\_1\_length\_9645\_cov\_.+"/> |
| 119 </assert_contents> | 119 </assert_contents> |
| 120 </output> | 120 </output> |
| 121 <output name="out_cs"> | 121 <output name="out_cs"> |
| 122 <assert_contents> | 122 <assert_contents> |
| 123 <has_n_lines n="1"/> | 123 <has_n_lines n="2"/> |
| 124 <has_text_matching expression="#name	length	coverage"/> | 124 <has_text_matching expression="#name	length	coverage"/> |
| 125 <has_text_matching expression="NODE_1	9645	13.774865_cutoff_0_type_circular"/> | |
| 125 </assert_contents> | 126 </assert_contents> |
| 126 </output> | 127 </output> |
| 127 <output_collection name="out_cr" type="list" count="3"> | 128 <output_collection name="out_cr" type="list" count="3"> |
| 128 <element name="pl1.fq.gz.fastq.00.0_0.cor"> | 129 <element name="pl1.fq.gz.fastq.00.0_0.cor"> |
| 129 <assert_contents> | 130 <assert_contents> |
| 147 <has_text_matching expression=">NODE\_1\_length\_9645\_cov\_.+"/> | 148 <has_text_matching expression=">NODE\_1\_length\_9645\_cov\_.+"/> |
| 148 </assert_contents> | 149 </assert_contents> |
| 149 </output> | 150 </output> |
| 150 <output name="out_ss"> | 151 <output name="out_ss"> |
| 151 <assert_contents> | 152 <assert_contents> |
| 152 <has_n_lines n="1"/> | 153 <has_n_lines n="2"/> |
| 153 <has_text_matching expression="#name	length	coverage"/> | 154 <has_text_matching expression="#name	length	coverage"/> |
| 155 <has_text_matching expression="NODE_1	9645	13.774865_cutoff_0_type_circula"/> | |
| 154 </assert_contents> | 156 </assert_contents> |
| 155 </output> | 157 </output> |
| 156 <output name="out_l"> | 158 <output name="out_l"> |
| 157 <assert_contents> | 159 <assert_contents> |
| 158 <has_text_matching expression="Thank you for using SPAdes!"/> | 160 <has_text_matching expression="Thank you for using SPAdes!"/> |