Mercurial > repos > iuc > spades_rnaviralspades

comparison rnaviralspades.xml @ 6:48cf45a53456 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/spades commit 35f71aa486d8754ee6a8387659032fc7c93d1be3
author iuc
date Wed, 10 Aug 2022 13:14:28 +0000
parents b3490b036c5a
children d5fb354f745d
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5:b3490b036c5a 6:48cf45a53456
16 #end if 16 #end if
17 @PREPROCESS_NANOPORE_PACBIO_FILES@ 17 @PREPROCESS_NANOPORE_PACBIO_FILES@
18 @PREPROCESS_CONTIGS_FILES@ 18 @PREPROCESS_CONTIGS_FILES@
19 @PREPROCESS_SANGER_FILES@ 19 @PREPROCESS_SANGER_FILES@
20 20
21 @OMP_THREADS@
21 ## run 22 ## run
22 spades.py --rnaviral 23 spades.py --rnaviral
23 -o 'output' 24 -o 'output'
24 @RESOURCES@ 25 @RESOURCES@
25 @INPUT_READS_MAIN@ 26 @INPUT_READS_MAIN@
349 350
350 .. class:: infomark 351 .. class:: infomark
351 352
352 **References** 353 **References**
353 354
354 More information are available on `github <https://github.com/ablab/spades>`_ and on the `project website <http://cab.spbu.ru/software/spades>`_. 355 More information are available on `github <https://github.com/ablab/spades>`_.
355 ]]></help> 356 ]]></help>
356 <expand macro="citations"/> 357 <expand macro="citations"/>
357 </tool> 358 </tool>