Mercurial > repos > iuc > squirrel_phylo
changeset 3:46a0e11a7607 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/squirrel commit 68ea06281ba78b828b8d1947745161697dc0fbc5
| author | iuc |
|---|---|
| date | Tue, 10 Jun 2025 13:32:43 +0000 |
| parents | f793ae405fd1 |
| children | |
| files | macros.xml squirrel-phylo.xml |
| diffstat | 2 files changed, 5 insertions(+), 5 deletions(-) [+] |
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--- a/macros.xml Tue Mar 11 09:14:19 2025 +0000 +++ b/macros.xml Tue Jun 10 13:32:43 2025 +0000 @@ -1,7 +1,7 @@ <?xml version="1.0"?> <macros> <token name="@TOOL_VERSION@">1.0.13</token> - <token name="@VERSION_SUFFIX@">0</token> + <token name="@VERSION_SUFFIX@">1</token> <xml name="requirements"> <requirements> <requirement type="package" version="@TOOL_VERSION@">squirrel</requirement> @@ -29,4 +29,4 @@ </citation> </citations> </xml> -</macros> \ No newline at end of file +</macros>
--- a/squirrel-phylo.xml Tue Mar 11 09:14:19 2025 +0000 +++ b/squirrel-phylo.xml Tue Jun 10 13:32:43 2025 +0000 @@ -130,7 +130,7 @@ <outputs> <!-- standard outputs--> - <data name="tree" format="newick" label="${tool.name} - phylogenetic tree" /> + <data name="tree" format="nexus" label="${tool.name} - phylogenetic tree" /> <data name="alignment" format="fasta" label="${tool.name} - aligned sequences" /> <!-- apobec3 outputs--> <data name="svg" format="svg" label="${tool.name} - phylotree svg image"> @@ -139,10 +139,10 @@ <data name="png" format="png" label="${tool.name} - phylotree png image"> <filter>apobec3</filter> </data> - <data name="aa_recon" format="png" label="${tool.name} - aa mutations ancestral reconstruction"> + <data name="aa_recon" format="csv" label="${tool.name} - aa mutations ancestral reconstruction"> <filter>apobec3</filter> </data> - <data name="branch_snps" format="png" label="${tool.name} - apobec3 nt mutations"> + <data name="branch_snps" format="csv" label="${tool.name} - apobec3 nt mutations"> <filter>apobec3</filter> </data> </outputs>