Mercurial > repos > iuc > sra_tools
comparison macros.xml @ 33:6591f049cf7e draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sra-tools commit 09541df3d3341a9ca442161117fa0e577d0d0bd5
| author | iuc |
|---|---|
| date | Wed, 25 Oct 2023 20:02:46 +0000 |
| parents | fb723c531be5 |
| children | e407b9da183a |
comparison
equal
deleted
inserted
replaced
| 32:fb723c531be5 | 33:6591f049cf7e |
|---|---|
| 114 </macro> | 114 </macro> |
| 115 <macro name="minMapq"> | 115 <macro name="minMapq"> |
| 116 <param name="minMapq" type="integer" min="0" max="42" label="Minimum mapping quality" optional="true" help="Minimum mapping quality an alignment has to have, to be dumped." argument="--min-mapq"/> | 116 <param name="minMapq" type="integer" min="0" max="42" label="Minimum mapping quality" optional="true" help="Minimum mapping quality an alignment has to have, to be dumped." argument="--min-mapq"/> |
| 117 </macro> | 117 </macro> |
| 118 <macro name="region"> | 118 <macro name="region"> |
| 119 <param format="text" name="region" type="text" label="aligned region" optional="true" | 119 <param name="region" type="text" label="aligned region" optional="true" |
| 120 help="Filter by position on genome. Can be either accession.version (ex: NC_000001.10), chromosome name (ex:chr1 or 1) or 1-based coordinates (ex: chr1:1-101)." argument="--aligned-region"/> | 120 help="Filter by position on genome. Can be either accession.version (ex: NC_000001.10), chromosome name (ex:chr1 or 1) or 1-based coordinates (ex: chr1:1-101)." argument="--aligned-region"/> |
| 121 </macro> | 121 </macro> |
| 122 <macro name="matepairDist"> | 122 <macro name="matepairDist"> |
| 123 <param name="matepairDist" type="text" label="mate-pair distance (from-to|unknown)" optional="true" | 123 <param name="matepairDist" type="text" label="mate-pair distance (from-to|unknown)" optional="true" |
| 124 help="Filter by distance between matepairs. Use unknown to find matepairs split between the references. Use from-to (inclusive) to limit matepair distance on the same reference" argument="--matepair-distance"/> | 124 help="Filter by distance between matepairs. Use unknown to find matepairs split between the references. Use from-to (inclusive) to limit matepair distance on the same reference" argument="--matepair-distance"/> |