Mercurial > repos > iuc > sra_tools
diff sra_macros.xml @ 14:1790dcf3c32d draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sra-tools commit 30ec06de1f3056967f5cc2d8ef57f9692d5533d7
| author | iuc |
|---|---|
| date | Tue, 04 Dec 2018 15:00:55 -0500 |
| parents | c38286ea7047 |
| children | f5ea3ce9b9b0 |
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--- a/sra_macros.xml Wed Oct 17 11:44:12 2018 -0400 +++ b/sra_macros.xml Tue Dec 04 15:00:55 2018 -0500 @@ -15,6 +15,7 @@ <macro name="requirements"> <requirements> <requirement type="package" version="2.9.1">sra-tools</requirement> + <requirement type="package" version="1.9">samtools</requirement> </requirements> </macro> <macro name="sanitize_query"> @@ -79,7 +80,7 @@ **How to generate accession lists** 1. Go to **SRA Run Selector** by clicking this link_ - 2. Find the study you are interested in by typing a search term within the **Search** box. This can be a word (e.g., *mitochondria*) or an accession you have gotten from a paper (e.g., *SRR1582967*). + 2. Find the study you are interested in by typing a search term within the **Search** box. This can be a word (e.g., *mitochondria*) or an accession you have gotten from a paper (e.g., *SRR1582967*). 3. Once you click on the study of interest you will see the number of datasets in this study within the **Related SRA data** box 4. Click on the Runs number 5. On the page that would open you will see **Accession List** button