Mercurial > repos > iuc > sra_tools

diff sam_dump.xml @ 26:83c7d564b128 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sra-tools commit 21f935ba50d3e4b455246c681e54d5c57c67032f"
author iuc
date Fri, 03 Sep 2021 16:17:53 +0000
parents 653e89d73fc4
children 9a776b080193
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--- a/sam_dump.xml	Tue Apr 27 08:55:34 2021 +0000
+++ b/sam_dump.xml	Fri Sep 03 16:17:53 2021 +0000
@@ -1,5 +1,6 @@
 <tool id="sam_dump" name="Download and Extract Reads in BAM" version="@VERSION@+galaxy0" profile="18.01">
     <description>format from NCBI SRA</description>
+    <expand macro="bio_tools"/>
     <macros>
         <import>sra_macros.xml</import>
     </macros>
@@ -167,7 +168,7 @@
 -----
 
 .. _BAM: https://samtools.github.io/hts-specs/SAMv1.pdf
-.. _sam-dump: https://ncbi.github.io/sra-tools/sam-dump.html
+.. _sam-dump: https://trace.ncbi.nlm.nih.gov/Traces/sra/sra.cgi?view=toolkit_doc&f=sam-dump
 .. _collection: https://galaxyproject.org/tutorials/collections/
 .. _link: https://trace.ncbi.nlm.nih.gov/Traces/sra/sra.cgi?view=studies