Mercurial > repos > iuc > sra_tools

diff sra_pileup.xml @ 2:f256cb398262 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sra-tools commit 4e83a7f6d542cd3129eb14a142f74c127f91d026
author iuc
date Fri, 16 Sep 2016 17:24:03 -0400
parents b723c120161a
children 4732693f4661
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--- a/sra_pileup.xml	Tue May 17 14:14:50 2016 -0400
+++ b/sra_pileup.xml	Fri Sep 16 17:24:03 2016 -0400
@@ -1,4 +1,4 @@
-<tool id="sra_pileup" name="Generate pileup format" version="1.2.5">
+<tool id="sra_pileup" name="Generate pileup format" version="2.6.2">
     <description>from NCBI sra.</description>
     <macros>
         <import>sra_macros.xml</import>
@@ -8,8 +8,8 @@
     <command>
         <![CDATA[
         ## Need to set the home directory to the current working directory,
-        ## else the tool tries to write to home/.ncbi and fails when used 
-        ## with a cluster manager. 
+        ## else the tool tries to write to home/.ncbi and fails when used
+        ## with a cluster manager.
         export HOME=\$PWD &&
         vdb-config --restore-defaults &&
         vdb-config -s "/repository/user/main/public/root=\$PWD" &&