comparison test-data/kmerfilter/kfreqdist.tsv @ 2:fcce77c09289 draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks2 commit f55e2407891a3c1f73f14a77b7ddadcd6f5eb1f8"
author iuc
date Thu, 16 Jul 2020 07:23:04 -0400
parents da351b9031de
children
comparison
equal deleted inserted replaced
1:f4aab9196d1e 2:fcce77c09289
1 # KmerFrequency Count 1 # Kmer Count
2 1 408 2 TAAGAGCATCGAGGG 1
3 2 136 3 CTCAGTTAAGAGCAT 1
4 ACTCAGTTAAGAGCA 1
5 CCACTCAGTTAAGAG 1
6 GCCACTCAGTTAAGA 1
7 GGCCACTCAGTTAAG 1
8 GGGCCACTCAGTTAA 1
9 CCGCGGGCCACTCAG 1
10 CCCGCGGGCCACTCA 1
11 CCCCGCGGGCCACTC 1
12 TTCGGACCCCGCGGG 1
13 GCTTCGGACCCCGCG 1
14 CGCTTCGGACCCCGC 1
15 AACGCTTCGGACCCC 1
16 GTAAACGCTTCGGAC 1
17 AGTAAACGCTTCGGA 1
18 AAGTAAACGCTTCGG 1
19 AAAGTAAACGCTTCG 1
20 CAAAGTAAACGCTTC 1
21 TCAAAGTAAACGCTT 1
22 TTTTCAAAGTAAACG 1
23 TTTTTTCAAAGTAAA 1
24 ATTTTTTCAAAGTAA 1
25 CTAATTTTTTCAAAG 1
26 CACTCTAATTTTTTC 1
27 AACACTCTAATTTTT 1
28 GAACACTCTAATTTT 1
29 CTTTGAACACTCTAA 1
30 GCTTTGAACACTCTA 1
31 TGCTTTGAACACTCT 1
32 CTGCTTTGAACACTC 1
33 TAAACGCTTCGGACC 1
34 CCTGCTTTGAACACT 1
35 GCCTGCTTTGAACAC 1
36 GGGCCTGCTTTGAAC 1
37 ACCGGGCCTGCTTTG 1
38 GACCGGGCCTGCTTT 1
39 ATTCAGGCGACCGGG 1
40 TATTCAGGCGACCGG 1
41 GTATTCAGGCGACCG 1
42 CGGTATTCAGGCGAC 1
43 ACACTCTAATTTTTT 1
44 GCGGTATTCAGGCGA 1
45 TGCGGTATTCAGGCG 1
46 CTGCGGTATTCAGGC 1
47 TAGCTGCGGTATTCA 1
48 CTAGCTGCGGTATTC 1
49 CCTAGCTGCGGTATT 1
50 TCCTAGCTGCGGTAT 1
51 TTCCTAGCTGCGGTA 1
52 CATTATTCCTAGCTG 1
53 CCATTATTCCTAGCT 1
54 ATTCCATTATTCCTA 1
55 TCCTATTCCATTATT 1
56 GTCCTATTCCATTAT 1
57 GAGTCCTATTCCATT 1
58 GGAGTCCTATTCCAT 1
59 AACCGGAGTCCTATT 1
60 GGACCCCGCGGGCCA 1
61 GAACCGGAGTCCTAT 1
62 AATAGAACCGGAGTC 1
63 AAATAGAACCGGAGT 1
64 AAAATAGAACCGGAG 1
65 ACAAAATAGAACCGG 1
66 CCACAAAATAGAACC 1
67 ACCCACAAAATAGAA 1
68 AACCCACAAAATAGA 1
69 AAACCCACAAAATAG 1
70 AAAACCCACAAAATA 1
71 AAAAACCCACAAAAT 1
72 GAAAAACCCACAAAA 1
73 TTAAGAGCATCGAGG 1
74 AGAAAAACCCACAAA 1
75 AAGAAAAACCCACAA 1
76 TGTTATAGCAGCAAA 1
77 GTACTCTGACCCTGG 2
78 GGTCGACATACTTTT 1
79 AGCAAAGGGGGGACC 1
80 TAGAACCGGAGTCCT 1
81 AGGCTGTTATAGCAG 1
82 AGAACCGGAGTCCTA 1
83 GAGGCTGTTATAGCA 1
84 GGAGGCTGTTATAGC 1
85 AGAAGAGTGGAGGCT 1
86 CCAGAAGAGTGGAGG 1
87 TTCCTCTGTCCCATT 2
88 CCTTCCCAGAAGAGT 1
89 GCAGCAAAGGGGGGA 1
90 TTTTCGACCGAAACT 2
91 TCTAACATCTAGTGG 1
92 AGTGGAGGCTGTTAT 1
93 AGTTGACACACACAA 2
94 TCTAGTGGAAAGCCT 1
95 CTGATTGAAACGCTA 1
96 CAGTTAAGAGCATCG 1
97 ACGCTATTAGCGCGC 1
98 TTGACACACACAACA 2
99 GAACCACTACTTCAA 1
100 CACTCAGTTAAGAGC 1
101 CTAACATCTAGTGGA 1
102 GCTGCGGTATTCAGG 1
103 GAGATGTTTGACGAG 1
104 CGGAGTCCTATTCCA 1
105 ACCGAAACTACACAT 2
106 GAAGAGTGGAGGCTG 1
107 AAGCCTTCCCAGAAG 1
108 AACCTCCGATCCGCA 2
109 TGAGCAACCCTACAG 2
110 ACGTTCTAACATCTA 1
111 AACGTTCTAACATCT 1
112 TATTCCTAGCTGCGG 1
113 ATTATTCCTAGCTGC 1
114 ATGTTTGACGAGCAG 1
115 TCTCTCGCACCGGAA 2
116 ATGAGATGTTTGACG 1
117 GGCCTGCTTTGAACA 1
118 AGCCTTCCCAGAAGA 1
119 TTCCATTATTCCTAG 1
120 CAACGTTCTAACATC 1
121 ACTGATTGAAACGCT 1
122 CTAGTGGAAAGCCTT 1
123 TGAGATGTTTGACGA 1
124 TCTGTCCCATTTCCT 2
125 CCTCTGTCCCATTTC 2
126 CATTCCTCTGTCCCA 2
127 TTGAACACTCTAATT 1
128 GAATGAGATGTTTGA 1
129 ACACATTCCTCTGTC 2
130 ATTCCTAGCTGCGGT 1
131 CTCCATATTATTGCC 1
132 GACCGAAACTACACA 2
133 CGACCGAAACTACAC 2
134 ACTACACATTCCTCT 2
135 CTGCAGTACTCTGAC 2
136 TTCTAACATCTAGTG 1
137 CCGAAACTACACATT 2
138 ATCCGTTACATATGT 1
139 TACATATGTATGTAT 1
140 CAGTACTCTGACCCT 2
141 GTTCTAACATCTAGT 1
142 ACAGTTTTCGACCGA 2
143 TTGACGAGCAGGGGT 1
144 CTCTGTCCCATTTCC 2
145 CACAAAATAGAACCG 1
146 TACTCTGACCCTGGC 2
147 ATAGCAGCAAAGGGG 1
148 TGAATGAGATGTTTG 1
149 AACAGTTTTCGACCG 2
150 TCGGACCCCGCGGGC 1
151 ACCCTACAGTTGACA 2
152 TCTCTCTCGCACCGG 2
153 GTATGTATGTACACA 1
154 ACACAACAGTTTTCG 2
155 ACACACAACAGTTTT 2
156 TCCCAGAAGAGTGGA 1
157 ACCACCGCTAACTAG 1
158 GAGTGGAGGCTGTTA 1
159 ACACACACAACAGTT 2
160 AACGCTATTAGCGCG 1
161 GTAACTGATTGAAAC 1
162 GTCTCTCTCGCACCG 2
163 AACATCTAGTGGAAA 1
164 CTTCCCAGAAGAGTG 1
165 GTGGAAAGCCTTCCC 1
166 CTACTTCAACTCAAG 1
167 CGCGGGCCACTCAGT 1
168 AACCTGTCTCTCTCG 2
169 CTCGCACCGGAAACC 2
170 CGCACCGGAAACCTC 2
171 TATGTATGTACACAC 1
172 ATCCATTTCACATCC 1
173 ACTCTAATTTTTTCA 1
174 GCTGCAGTACTCTGA 2
175 ACATGAGCAACCCTA 2
176 GACCCCGCGGGCCAC 1
177 AAGAGTGGAGGCTGT 1
178 CCGGAAACCTCCGAT 2
179 GCAGCAACGTTCTAA 1
180 GAAACTACACATTCC 2
181 CTGACCCTGGCCACC 2
182 ACCTCAACCTGTCTC 2
183 AAACTACACATTCCT 2
184 AGAGTGGAGGCTGTT 1
185 GCGACCGGGCCTGCT 1
186 CATCTAGTGGAAAGC 1
187 CAGAAACATGAGCAA 2
188 ACTTCAACTCAAGGT 1
189 CGGGCCACTCAGTTA 1
190 AGAAACATGAGCAAC 2
191 CTATTCCATTATTCC 1
192 TTTTGAATGAGATGT 1
193 GGCGACCGGGCCTGC 1
194 ACATCTAGTGGAAAG 1
195 TAGCAGCAAAGGGGG 1
196 GGACCAACTCCATAT 1
197 GACATTGGCTGCAGT 2
198 CCTATTCCATTATTC 1
199 CAGTTTTCGACCGAA 2
200 CAACCCTACAGTTGA 2
201 TTTGACGAGCAGGGG 1
202 GACGTAACTGATTGA 1
203 CAGGCGACCGGGCCT 1
204 ACTCTGACCCTGGCC 2
205 CCGGGCCTGCTTTGA 1
206 AGTGGAAAGCCTTCC 1
207 TTGAAACGCTATTAG 1
208 CGTTCTAACATCTAG 1
209 TTGAGGATGCAGCAA 1
210 CTCAAAGCGAGTGAC 1
211 GGACATTGGCTGCAG 2
212 ACCTGTCTCTCTCGC 2
213 TTTGAACACTCTAAT 1
214 TGACACACACAACAG 2
215 CACATTCCTCTGTCC 2
216 GTTTTCGACCGAAAC 2
217 GCAGAAACATGAGCA 2
218 CTGGCCACCTCAACC 2
219 GATCCGCAGAAACAT 2
220 TCCGATCCGCAGAAA 2
221 AACCACTACTTCAAC 1
222 GCTGTTATAGCAGCA 1
223 AACTAGCTATCCATT 1
224 CATGAGCAACCCTAC 2
225 TCGACCGAAACTACA 2
226 CCTACAGTTGACACA 2
227 AAGGGGAACCACTAC 1
228 AAAGCCTTCCCAGAA 1
229 CACAACAGTTTTCGA 2
230 GGAACCACTACTTCA 1
231 CCTCAACCTGTCTCT 2
232 AAACCTCCGATCCGC 2
233 CTTCGGACCCCGCGG 1
234 GGGGAACCACTACTT 1
235 GGCTGCAGTACTCTG 2
236 TTGGCTGCAGTACTC 2
237 GAGCAAGGGGAACCA 1
238 AGCAACGTTCTAACA 1
239 TGCAGTACTCTGACC 2
240 TGGCCACCTCAACCT 2
241 GACTTTTGAATGAGA 1
242 CAGAAGAAAAACCCA 1
243 CACCTCAACCTGTCT 2
244 CCGATCCGCAGAAAC 2
245 GTTATAGCAGCAAAG 1
246 TGGCTGCAGTACTCT 2
247 CTGTCCCATTTCCTC 2
248 AGATGTTTGACGAGC 1
249 TACTTCAACTCAAGG 1
250 AGCAGGGGTCGACAT 1
251 CTTTTGAATGAGATG 1
252 TCAACTCAAGGTCTC 1
253 ACCGCTAACTAGCTA 1
254 GCCACCTCAACCTGT 2
255 TGACTTTTGAATGAG 1
256 ACCACTACTTCAACT 1
257 CCACCTCAACCTGTC 2
258 CCATATTATTGCCCA 1
259 CATTGGCTGCAGTAC 2
260 CTCTAATTTTTTCAA 1
261 ATCTAGTGGAAAGCC 1
262 AGTACTCTGACCCTG 2
263 TTCGACCGAAACTAC 2
264 CGGAAACCTCCGATC 2
265 AGCTATCCATTTCAC 1
266 TGACCCTGGCCACCT 2
267 CCGCGGCCCTTGCAG 1
268 CTTCAACTCAAGGTC 1
269 TTAGCGCGCACCACC 1
270 GTGGAGGCTGTTATA 1
271 CACCGGAAACCTCCG 2
272 GATTGAGGATGCAGC 1
273 AAACGCTTCGGACCC 1
274 ACAGTTGACACACAC 2
275 CGACCGGGCCTGCTT 1
276 AGTCCTATTCCATTA 1
277 AAGGTCTCAAAGCGA 1
278 ACCCTGGCCACCTCA 2
279 ACAACAGTTTTCGAC 2
280 CTCTCTCGCACCGGA 2
281 TGTCTCTCTCGCACC 2
282 CAAAGCGAGTGACGT 1
283 TTTTTCAAAGTAAAC 1
284 TCTCGCACCGGAAAC 2
285 GGCCACCTCAACCTG 2
286 ATGCCGCGGCCCTTG 1
287 TGTTTGACGAGCAGG 1
288 CCCACAAAATAGAAC 1
289 GAGGATGCAGCAACG 1
290 AACCCTACAGTTGAC 2
291 CCTGTCTCTCTCGCA 2
292 TGCAGCAACGTTCTA 1
293 AGCAAGGGGAACCAC 1
294 TCTGACCCTGGCCAC 2
295 GGCCCTTGCAGAGCA 1
296 TAATTTTTTCAAAGT 1
297 CTGTCTCTCTCGCAC 2
298 ATAGAACCGGAGTCC 1
299 GACCCTGGCCACCTC 2
300 TGATTGAAACGCTAT 1
301 GCGGGCCACTCAGTT 1
302 TCAGAAGAAAAACCC 1
303 TGGAGGCTGTTATAG 1
304 AGCGCGCACCACCGC 1
305 TCGCACCGGAAACCT 2
306 TCAGTTAAGAGCATC 1
307 ATTCCTCTGTCCCAT 2
308 GACGAGCAGGGGTCG 1
309 CCACTACTTCAACTC 1
310 TCAACCTGTCTCTCT 2
311 ACCGGAAACCTCCGA 2
312 CCCTGGCCACCTCAA 2
313 GAAACATGAGCAACC 2
314 GCTAACTAGCTATCC 1
315 AGTTTTCGACCGAAA 2
316 CACACACAACAGTTT 2
317 ATTTCACATCCGTTA 1
318 TATTCCATTATTCCT 1
319 CGATCCGCAGAAACA 2
320 GGCTGTTATAGCAGC 1
321 GGAAACCTCCGATCC 2
322 GCAACGTTCTAACAT 1
323 AGCAACCCTACAGTT 2
324 TTATTCCTAGCTGCG 1
325 CTCTGACCCTGGCCA 2
326 CAGCAAAGGGGGGAC 1
327 CAGAAGAGTGGAGGC 1
328 TACAGTTGACACACA 2
329 TAGCGCGCACCACCG 1
330 AAACATGAGCAACCC 2
331 AAACGCTATTAGCGC 1
332 GAAACCTCCGATCCG 2
333 GCCCATGACTTTTGA 1
334 TCCATATTATTGCCC 1
335 ACATTGGCTGCAGTA 2
336 CAGTTGACACACACA 2
337 TCAAGGTCTCAAAGC 1
338 ATCCGCAGAAACATG 2
339 CACACAACAGTTTTC 2
340 GGATGCAGCAACGTT 1
341 TTCAAAGTAAACGCT 1
342 AACATGAGCAACCCT 2
343 GAGTGACGTAACTGA 1
344 CTGTTATAGCAGCAA 1
345 TAACATCTAGTGGAA 1
346 CTCTCGCACCGGAAA 2
347 CGCAGAAACATGAGC 2
348 GGATTGAGGATGCAG 1
349 TCCTCTGTCCCATTT 2
350 GGTATTCAGGCGACC 1
351 ATGAGCAACCCTACA 2
352 TGGAAAGCCTTCCCA 1
353 AGGCGACCGGGCCTG 1
354 ACCTCCGATCCGCAG 2
355 TCCATTATTCCTAGC 1
356 ACTACTTCAACTCAA 1
357 GAGCAACCCTACAGT 2
358 GCAACCCTACAGTTG 2
359 AGCTGCGGTATTCAG 1
360 ACTAGCTATCCATTT 1
361 AGAAGAAAAACCCAC 1
362 CCCTACAGTTGACAC 2
363 CTACAGTTGACACAC 2
364 CAAGGGGAACCACTA 1
365 AGGATGCAGCAACGT 1
366 TTATAGCAGCAAAGG 1
367 GTTAAGAGCATCGAG 1
368 TATAGCAGCAAAGGG 1
369 GCAAAGGGGGGACCA 1
370 CAAAGGGGGGACCAA 1
371 ACCCCGCGGGCCACT 1
372 GACCAACTCCATATT 1
373 ACATATGTATGTATG 1
374 AAGGGGGGACCAACT 1
375 ACATTCCTCTGTCCC 2
376 GCACCACCGCTAACT 1
377 CCGCAGAAACATGAG 2
378 AGGGGGGACCAACTC 1
379 GGGGGGACCAACTCC 1
380 GGGGGACCAACTCCA 1
381 GCACCGGAAACCTCC 2
382 GGGGACCAACTCCAT 1
383 GCAGTACTCTGACCC 2
384 ACCAACTCCATATTA 1
385 CCAACTCCATATTAT 1
386 ACATCCGTTACATAT 1
387 TATTGCCCATGACTT 1
388 CAACTCCATATTATT 1
389 CTCAAGGTCTCAAAG 1
390 CTATTAGCGCGCACC 1
391 AACTCCATATTATTG 1
392 ATTGAGGATGCAGCA 1
393 CATATTATTGCCCAT 1
394 GGGAACCACTACTTC 1
395 ATATTATTGCCCATG 1
396 TATTATTGCCCATGA 1
397 TCTAATTTTTTCAAA 1
398 TTTCGACCGAAACTA 2
399 ATTATTGCCCATGAC 1
400 ACTCCATATTATTGC 1
401 CCGCTAACTAGCTAT 1
402 TTATTGCCCATGACT 1
403 CAACAGTTTTCGACC 2
404 ATTGCCCATGACTTT 1
405 TTGCCCATGACTTTT 1
406 TGAGGATGCAGCAAC 1
407 TGCCCATGACTTTTG 1
408 CGCACCACCGCTAAC 1
409 CCCATGACTTTTGAA 1
410 TTCACATCCGTTACA 1
411 CCATGACTTTTGAAT 1
412 ATGACTTTTGAATGA 1
413 ATGCAGCAACGTTCT 1
414 GCGCACCACCGCTAA 1
415 ACTTTTGAATGAGAT 1
416 CATGACTTTTGAATG 1
417 TTTGAATGAGATGTT 1
418 AATTTTTTCAAAGTA 1
419 ATGTATGTACACACA 1
420 TCCGCAGAAACATGA 2
421 TTGAATGAGATGTTT 1
422 GATGTTTGACGAGCA 1
423 TCACATCCGTTACAT 1
424 ACGAGCAGGGGTCGA 1
425 GAAGAAAAACCCACA 1
426 CCCAGAAGAGTGGAG 1
427 CGAGCAGGGGTCGAC 1
428 GAGCAGGGGTCGACA 1
429 GCAGAGCAAGGGGAA 1
430 GTTGACACACACAAC 2
431 GCAGGGGTCGACATA 1
432 CGGACCCCGCGGGCC 1
433 GATTGAAACGCTATT 1
434 CAGGGGTCGACATAC 1
435 ATTGAAACGCTATTA 1
436 CAGCAACGTTCTAAC 1
437 CAGAGCAAGGGGAAC 1
438 AATGAGATGTTTGAC 1
439 AGGGGTCGACATACT 1
440 CTCCGATCCGCAGAA 2
441 GGGGTCGACATACTT 1
442 CAACCTGTCTCTCTC 2
443 GGGTCGACATACTTT 1
444 CAAAATAGAACCGGA 1
445 TACACATTCCTCTGT 2
446 AACTCAAGGTCTCAA 1
447 TGCCGCGGCCCTTGC 1
448 GCCGCGGCCCTTGCA 1
449 CGCGGCCCTTGCAGA 1
450 GCGGCCCTTGCAGAG 1
451 CGGCCCTTGCAGAGC 1
452 TTTCAAAGTAAACGC 1
453 GCCTTCCCAGAAGAG 1
454 TTTCACATCCGTTAC 1
455 CCCTTGCAGAGCAAG 1
456 CGGGCCTGCTTTGAA 1
457 CTTGCAGAGCAAGGG 1
458 TTGCAGAGCAAGGGG 1
459 AAAGGGGGGACCAAC 1
460 CCTTGCAGAGCAAGG 1
461 TGCAGAGCAAGGGGA 1
462 AGAGCAAGGGGAACC 1
463 CCGGAGTCCTATTCC 1
464 GCAAGGGGAACCACT 1
465 TCCGTTACATATGTA 1
466 AGGGGAACCACTACT 1
467 CCTCCGATCCGCAGA 2
468 CCTGGCCACCTCAAC 2
469 CACTACTTCAACTCA 1
470 TTCCCAGAAGAGTGG 1
471 TTCAACTCAAGGTCT 1
472 CAACTCAAGGTCTCA 1
473 ACTCAAGGTCTCAAA 1
474 GGTCTCAAAGCGAGT 1
475 ACGCTTCGGACCCCG 1
476 ATTGGCTGCAGTACT 2
477 CAAGGTCTCAAAGCG 1
478 GCTATCCATTTCACA 1
479 GGGACCAACTCCATA 1
480 TATCCATTTCACATC 1
481 AACTACACATTCCTC 2
482 AGGTCTCAAAGCGAG 1
483 GATGCAGCAACGTTC 1
484 GTCTCAAAGCGAGTG 1
485 TGAACACTCTAATTT 1
486 TGTATGTATGTACAC 1
487 TCTCAAAGCGAGTGA 1
488 TCAAAGCGAGTGACG 1
489 AAGCGAGTGACGTAA 1
490 CACCGCTAACTAGCT 1
491 AGCGAGTGACGTAAC 1
492 TTCAGGCGACCGGGC 1
493 CACCACCGCTAACTA 1
494 GCGAGTGACGTAACT 1
495 AGTGACGTAACTGAT 1
496 GTGACGTAACTGATT 1
497 TATGTATGTATGTAC 1
498 TGACGTAACTGATTG 1
499 ACGTAACTGATTGAA 1
500 CTCAACCTGTCTCTC 2
501 CGTAACTGATTGAAA 1
502 TAGTGGAAAGCCTTC 1
503 TAACTGATTGAAACG 1
504 GGAAAGCCTTCCCAG 1
505 AACTGATTGAAACGC 1
506 AGCAGCAAAGGGGGG 1
507 TGAAACGCTATTAGC 1
508 GAAACGCTATTAGCG 1
509 CGCTATTAGCGCGCA 1
510 GCTATTAGCGCGCAC 1
511 AAAGCGAGTGACGTA 1
512 TATTAGCGCGCACCA 1
513 TCAGGCGACCGGGCC 1
514 ATTAGCGCGCACCAC 1
515 GCGCGCACCACCGCT 1
516 ACCGGAGTCCTATTC 1
517 CGCGCACCACCGCTA 1
518 CCACCGCTAACTAGC 1
519 GAAAGCCTTCCCAGA 1
520 CGCTAACTAGCTATC 1
521 CTAACTAGCTATCCA 1
522 TAACTAGCTATCCAT 1
523 GACACACACAACAGT 2
524 CTAGCTATCCATTTC 1
525 GCCCTTGCAGAGCAA 1
526 TAGCTATCCATTTCA 1
527 TGACGAGCAGGGGTC 1
528 CTATCCATTTCACAT 1
529 TCCATTTCACATCCG 1
530 GTTTGACGAGCAGGG 1
531 CATTTCACATCCGTT 1
532 AGTTAAGAGCATCGA 1
533 CACATCCGTTACATA 1
534 ATGTATGTATGTACA 1
535 CTACACATTCCTCTG 2
536 CATCCGTTACATATG 1
537 CCGTTACATATGTAT 1
538 CGAGTGACGTAACTG 1
539 CGTTACATATGTATG 1
540 CCATTTCACATCCGT 1
541 GTTACATATGTATGT 1
542 TTACATATGTATGTA 1
543 CGAAACTACACATTC 2
544 CATATGTATGTATGT 1
545 ATATGTATGTATGTA 1