Mercurial > repos > iuc > stacks2_denovomap
diff test-data/procrad/process_radtags.out @ 5:04db7fd6b238 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks2 commit 16654f3b3faaba994cea5fda8d4907ea4f059605"
author | iuc |
---|---|
date | Thu, 14 Apr 2022 09:20:20 +0000 |
parents | b9822370f843 |
children |
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--- a/test-data/procrad/process_radtags.out Wed Sep 01 11:24:18 2021 +0000 +++ b/test-data/procrad/process_radtags.out Thu Apr 14 09:20:20 2022 +0000 @@ -1,13 +1,16 @@ -process_radtags v2.2, executed 2018-11-23 13:34:27 -process_radtags -p stacks_inputs/ -i fastq -b /tmp/tmp2_xu5h/files/000/dataset_2.dat --inline_null -e ecoRI -o stacks_outputs +process_radtags v2.55, executed 2022-01-04 19:49:25 (zlib-1.2.11) +process_radtags -p stacks_inputs/ -i fastq -b /tmp/tmp1omqb2_d/files/2/a/2/dataset_2a2dd860-d29c-4b1a-9d82-80c8f91d4013.dat --inline_null -o stacks_outputs -e ecoRI File Retained Reads Low Quality Barcode Not Found RAD cutsite Not Found Total -R1.fastq 2222 0 0 4778 7000 +R1_01.fastq 1375 0 0 801 2176 +R1_02.fastq 97 0 0 2078 2175 +R1_03.fastq 749 0 0 1427 2176 +R1_04.fastq 0 0 0 470 470 -Total Sequences 7000 +Total Sequences 6997 Barcode Not Found 0 Low Quality 0 -RAD Cutsite Not Found 4778 -Retained Reads 2222 +RAD Cutsite Not Found 4776 +Retained Reads 2221 Barcode Filename Total NoRadTag LowQuality Retained ATGGGG PopA_01 160 94 0 66 @@ -22,7 +25,7 @@ TGTGAG PopA_10 168 128 0 40 ATAGTT PopA_11 200 132 0 68 GGAAGG PopA_12 178 136 0 42 -TTTGTG PopA_13 190 152 0 38 +TTTGTG PopA_13 189 151 0 38 TTAAAT PopA_14 166 96 0 70 AATAAG PopA_15 152 74 0 78 AAGAGG PopA_16 174 112 0 62 @@ -42,13 +45,13 @@ GGGAAT PopB_09 198 126 0 72 AGTAAT PopB_10 164 120 0 44 GGGATA PopB_11 146 90 0 56 -GAGAAG PopB_12 162 110 0 52 +GAGAAG PopB_12 161 110 0 51 AGTAGA PopB_13 204 146 0 58 AAGGAT PopB_14 180 128 0 52 AGGGTA PopB_15 134 72 0 62 TGTTTT PopB_16 138 98 0 40 ATGATG PopB_17 142 100 0 42 -GAGTTA PopB_18 160 112 0 48 +GAGTTA PopB_18 159 111 0 48 ATGTAG PopB_19 146 104 0 42 Sequences not recorded