diff test-data/gstacks/gstacks.log.distribs @ 4:405a212b32ab draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks2 commit 75f83e7b16127aecc68a58df2cb75062f2a9296a"
author iuc
date Wed, 01 Sep 2021 11:24:18 +0000
parents 421c33b8bf17
children
line wrap: on
line diff
--- a/test-data/gstacks/gstacks.log.distribs	Tue Apr 27 09:33:15 2021 +0000
+++ b/test-data/gstacks/gstacks.log.distribs	Wed Sep 01 11:24:18 2021 +0000
@@ -19,25 +19,25 @@
 Num. threads: 1
 Parallel time: 0.0
 Average thread time spent:
-     0.0  reading (3.0%)
-     0.0  processing (95.7%)
-             0.0 pre-alignments block (74.4%)
-             0.0  reformatting fw-reads (0.2%)
-             0.0  assembling (27.3%)
-             0.0  initializing alignments (8.7%)
-             0.0  aligning (36.6%)
+     0.0  reading (2.8%)
+     0.0  processing (95.9%)
+             0.0 pre-alignments block (76.1%)
+             0.0  reformatting fw-reads (0.1%)
+             0.0  assembling (17.5%)
+             0.0  initializing alignments (4.0%)
+             0.0  aligning (52.9%)
              0.0  merging read pairs (1.6%)
-             0.0 post-alignments block (19.8%)
+             0.0 post-alignments block (18.7%)
              0.0  filtering reads (0.0%)
-             0.0  counting nucleotides (3.2%)
-             0.0  genotyping (1.5%)
-             0.0  haplotyping (0.9%)
+             0.0  counting nucleotides (2.8%)
+             0.0  genotyping (1.2%)
+             0.0  haplotyping (1.0%)
              0.0  computing consensus (0.1%)
              0.0  building_fa (0.1%)
-             0.0  building_vcf (14.0%)
+             0.0  building_vcf (13.4%)
      0.0  writing_fa (0.0%)
      0.0  writing_vcf (0.9%)
-     0.0  clocking (0.1%)
-Total time spent writing vcf: 0.0 (0.8%)
+     0.0  clocking (0.2%)
+Total time spent writing vcf: 0.0 (0.9%)
 VCFwrite block size: mean=1.0(n=3); max=1
 END clockings