Mercurial > repos > iuc > stacks2_kmerfilter
view test-data/populations/populations.log.distribs @ 4:c9b77ced9a78 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks2 commit 75f83e7b16127aecc68a58df2cb75062f2a9296a"
author | iuc |
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date | Wed, 01 Sep 2021 11:30:57 +0000 |
parents | b2e3553e1be2 |
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# Note: Individual distributions can be extracted using the `stacks-dist-extract` utility. # e.g. `stacks-dist-extract populations.log.distribs dist_name` BEGIN batch_progress Batch 1: analyzed 3 loci; filtered 0 loci; 3 loci seen. END batch_progress BEGIN samples_per_loc_prefilters # Distribution of valid samples matched to a catalog locus prior to filtering. n_samples n_loci 2 3 END samples_per_loc_prefilters BEGIN missing_samples_per_loc_prefilters # Distribution of missing samples for each catalog locus prior to filtering. # Absent samples at locus Count 0 3 END missing_samples_per_loc_prefilters BEGIN snps_per_loc_prefilters # Distribution of the number of SNPs per catalog locus prior to filtering. n_snps n_loci 2 3 END snps_per_loc_prefilters BEGIN samples_per_loc_postfilters # Distribution of valid samples matched to a catalog locus after filtering. n_samples n_loci 2 3 END samples_per_loc_postfilters BEGIN missing_samples_per_loc_postfilters # Distribution of missing samples for each catalog locus after filtering. # Absent samples at locus Count 0 3 END missing_samples_per_loc_postfilters BEGIN snps_per_loc_postfilters # Distribution of the number of SNPs per catalog locus (after filtering). n_snps n_loci 2 3 END snps_per_loc_postfilters