diff test-data/procrad/process_radtags.out @ 5:4e280b27a831 draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks2 commit 16654f3b3faaba994cea5fda8d4907ea4f059605"
author iuc
date Thu, 14 Apr 2022 09:25:46 +0000
parents ad7a60726fc3
children
line wrap: on
line diff
--- a/test-data/procrad/process_radtags.out	Wed Sep 01 11:23:22 2021 +0000
+++ b/test-data/procrad/process_radtags.out	Thu Apr 14 09:25:46 2022 +0000
@@ -1,13 +1,16 @@
-process_radtags v2.2, executed 2018-11-23 13:34:27
-process_radtags -p stacks_inputs/ -i fastq -b /tmp/tmp2_xu5h/files/000/dataset_2.dat --inline_null -e ecoRI -o stacks_outputs
+process_radtags v2.55, executed 2022-01-04 19:49:25 (zlib-1.2.11)
+process_radtags -p stacks_inputs/ -i fastq -b /tmp/tmp1omqb2_d/files/2/a/2/dataset_2a2dd860-d29c-4b1a-9d82-80c8f91d4013.dat --inline_null -o stacks_outputs -e ecoRI
 File	Retained Reads	Low Quality	Barcode Not Found	RAD cutsite Not Found	Total
-R1.fastq	2222	0	0	4778	7000
+R1_01.fastq	1375	0	0	801	2176
+R1_02.fastq	97	0	0	2078	2175
+R1_03.fastq	749	0	0	1427	2176
+R1_04.fastq	0	0	0	470	470
 
-Total Sequences	7000
+Total Sequences	6997
 Barcode Not Found	0
 Low Quality	0
-RAD Cutsite Not Found	4778
-Retained Reads	2222
+RAD Cutsite Not Found	4776
+Retained Reads	2221
 
 Barcode	Filename	Total	NoRadTag	LowQuality	Retained
 ATGGGG	PopA_01	160	94	0	66
@@ -22,7 +25,7 @@
 TGTGAG	PopA_10	168	128	0	40
 ATAGTT	PopA_11	200	132	0	68
 GGAAGG	PopA_12	178	136	0	42
-TTTGTG	PopA_13	190	152	0	38
+TTTGTG	PopA_13	189	151	0	38
 TTAAAT	PopA_14	166	96	0	70
 AATAAG	PopA_15	152	74	0	78
 AAGAGG	PopA_16	174	112	0	62
@@ -42,13 +45,13 @@
 GGGAAT	PopB_09	198	126	0	72
 AGTAAT	PopB_10	164	120	0	44
 GGGATA	PopB_11	146	90	0	56
-GAGAAG	PopB_12	162	110	0	52
+GAGAAG	PopB_12	161	110	0	51
 AGTAGA	PopB_13	204	146	0	58
 AAGGAT	PopB_14	180	128	0	52
 AGGGTA	PopB_15	134	72	0	62
 TGTTTT	PopB_16	138	98	0	40
 ATGATG	PopB_17	142	100	0	42
-GAGTTA	PopB_18	160	112	0	48
+GAGTTA	PopB_18	159	111	0	48
 ATGTAG	PopB_19	146	104	0	42
 
 Sequences not recorded