Mercurial > repos > iuc > stacks2_tsv2bam
view test-data/populations/populations.log.distribs @ 2:bf0e43ab0416 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks2 commit f55e2407891a3c1f73f14a77b7ddadcd6f5eb1f8"
author | iuc |
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date | Wed, 15 Jul 2020 17:29:50 -0400 |
parents | 1b270fc77c81 |
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# Note: Individual distributions can be extracted using the `stacks-dist-extract` utility. # e.g. `stacks-dist-extract populations.log.distribs dist_name` BEGIN batch_progress Batch 1: analyzed 3 loci; filtered 0 loci; 3 loci seen. END batch_progress BEGIN samples_per_loc_prefilters # Distribution of valid samples matched to a catalog locus prior to filtering. n_samples n_loci 2 3 END samples_per_loc_prefilters BEGIN missing_samples_per_loc_prefilters # Distribution of missing samples for each catalog locus prior to filtering. # Absent samples at locus Count 0 3 END missing_samples_per_loc_prefilters BEGIN snps_per_loc_prefilters # Distribution of the number of SNPs per catalog locus prior to filtering. n_snps n_loci 2 3 END snps_per_loc_prefilters BEGIN samples_per_loc_postfilters # Distribution of valid samples matched to a catalog locus after filtering. n_samples n_loci 2 3 END samples_per_loc_postfilters BEGIN missing_samples_per_loc_postfilters # Distribution of missing samples for each catalog locus after filtering. # Absent samples at locus Count 0 3 END missing_samples_per_loc_postfilters BEGIN snps_per_loc_postfilters # Distribution of the number of SNPs per catalog locus (after filtering). n_snps n_loci 2 3 END snps_per_loc_postfilters