Mercurial > repos > iuc > stacks_pstacks
changeset 5:c9413b0ba604 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks commit 9401451df4a985ef5686864eaadafa077ffc0877
| author | iuc |
|---|---|
| date | Mon, 27 Feb 2017 05:44:24 -0500 |
| parents | 77e29e6a6101 |
| children | d7aeb194291f |
| files | macros.xml stacks_pstacks.xml |
| diffstat | 2 files changed, 3 insertions(+), 3 deletions(-) [+] |
line wrap: on
line diff
--- a/macros.xml Mon Sep 26 11:45:03 2016 -0400 +++ b/macros.xml Mon Feb 27 05:44:24 2017 -0500 @@ -38,9 +38,9 @@ **Project links:** -`Stacks website <http://creskolab.uoregon.edu/stacks/>`_ +`Stacks website <http://catchenlab.life.illinois.edu/stacks/>`_ -`Stacks manual <http://creskolab.uoregon.edu/stacks/stacks_manual.pdf>`_ +`Stacks manual <http://catchenlab.life.illinois.edu/stacks/manual/>`_ `Stacks google group <http://groups.google.com/group/stacks-users>`_ ]]></token>
--- a/stacks_pstacks.xml Mon Sep 26 11:45:03 2016 -0400 +++ b/stacks_pstacks.xml Mon Feb 27 05:44:24 2017 -0500 @@ -13,7 +13,7 @@ && - #if $sample.ext == "sam": + #if $sample.is_of_type('sam'): #set $data_path = splitext($sample.element_identifier)[0] #set $data_path = re.sub(r'\.1$', '', $data_path) #set $data_path = "stacks_inputs/" + $data_path + ".sam"