comparison stacks_stats.xml @ 4:a0c52b82b9d3 draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks commit 74ee33c6e30744a6da8deb7116d431d80ee80edb

3:93b16407d6e9

<tool id="stacks_stats" name="Stacks: statistics" version="@WRAPPER_VERSION@.0">
    <description>on stacks found for multiple samples</description>
    <expand macro="bio_tools"/>
    <macros>
        <import>macros.xml</import>
    </macros>
    <expand macro="requirements"/>
    <expand macro="stdio"/>
    <command><![CDATA[
        mkdir stacks_inputs

        <param name="program" type="select" argument="--stacks-prog" label="Program which generated the stacks">
            <option value="ustacks">ustacks (denovo)</option>
            <option value="pstacks">pstacks (refmap)</option>
        </param>

        <param name="logfile" argument="--logfile" format="txt" type="data" label="Log generated by the program" />

        <param name="input_col" format="tabular,txt" type="data_collection" collection_type="list" label="Output from ustacks or pstacks" />
    </inputs>

    <outputs>

4:a0c52b82b9d3

<tool id="stacks_stats" name="Stacks: statistics" version="@WRAPPER_VERSION@.0">
    <description>on stacks found for multiple samples</description>
    <macros>
        <import>macros.xml</import>
    </macros>
    <expand macro="bio_tools"/>
    <expand macro="requirements"/>
    <expand macro="stdio"/>
    <command><![CDATA[
        mkdir stacks_inputs

        <param name="program" type="select" argument="--stacks-prog" label="Program which generated the stacks">
            <option value="ustacks">ustacks (denovo)</option>
            <option value="pstacks">pstacks (refmap)</option>
        </param>

        <param argument="--logfile" format="txt" type="data" label="Log generated by the program" />

        <param name="input_col" format="tabular,txt" type="data_collection" collection_type="list" label="Output from ustacks or pstacks" />
    </inputs>

    <outputs>