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view test-data/populations/batch_1.vcf @ 0:fe6be53294c9 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks commit dc23703c260d004a28fe24a2a7c00cb4371bc32e
author iuc
date Thu, 27 Apr 2017 04:18:05 -0400
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##fileformat=VCFv4.2
##fileDate=20160926
##source="Stacks v1.42"
##INFO=<ID=NS,Number=1,Type=Integer,Description="Number of Samples With Data">
##INFO=<ID=AF,Number=.,Type=Float,Description="Allele Frequency">
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read Depth">
##FORMAT=<ID=AD,Number=1,Type=Integer,Description="Allele Depth">
##FORMAT=<ID=GL,Number=.,Type=Float,Description="Genotype Likelihood">
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	PopA_01	PopA_02
un	35	1_33	A	C	.	PASS	NS=2;AF=0.500	GT:DP:AD:GL	0/1:18:9,9:.,19.78,.	0/1:10:6,4:.,13.18,.
un	90	1_88	A	C	.	PASS	NS=2;AF=0.500	GT:DP:AD:GL	0/1:18:9,9:.,19.78,.	0/1:10:4,6:.,13.18,.