Mercurial > repos > iuc > staramr

annotate test-data/staramr_database.loc @ 4:6d5c8a6ceea0 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/staramr commit a190acff54b88a92e398b5b314b25d64ce2bf8eb
author iuc
date Tue, 09 Sep 2025 15:45:23 +0000
parents 6edfb4b6db85
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Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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6edfb4b6db85 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/staramr commit 45daaecba3332d984a900727bf348ffb07a07154
iuc
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1 #This is a tab separated file describing the location of StarAMR databases
6edfb4b6db85 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/staramr commit 45daaecba3332d984a900727bf348ffb07a07154
iuc
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2 #used for the StarAMR tool
6edfb4b6db85 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/staramr commit 45daaecba3332d984a900727bf348ffb07a07154
iuc
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3 #
6edfb4b6db85 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/staramr commit 45daaecba3332d984a900727bf348ffb07a07154
iuc
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4 #file has this format (white space characters are TAB characters)
6edfb4b6db85 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/staramr commit 45daaecba3332d984a900727bf348ffb07a07154
iuc
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5 #
6edfb4b6db85 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/staramr commit 45daaecba3332d984a900727bf348ffb07a07154
iuc
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6 #The columns are:
6edfb4b6db85 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/staramr commit 45daaecba3332d984a900727bf348ffb07a07154
iuc
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7 #value name path resfinder_commit pointfinder_commit plasmidfinder_commit
6edfb4b6db85 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/staramr commit 45daaecba3332d984a900727bf348ffb07a07154
iuc
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8 #
6edfb4b6db85 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/staramr commit 45daaecba3332d984a900727bf348ffb07a07154
iuc
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9 #For example
6edfb4b6db85 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/staramr commit 45daaecba3332d984a900727bf348ffb07a07154
iuc
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10 #staramr_downloaded_20241004_resfinder_d1e607b_pointfinder_694919f_plasmidfinder_3e77502 ResFinder: tag 4.6.0, commit d1e607b, 2024-08-06 - PointFinder: tag 4.1.1, commit 694919f, 2024-08-08 - PlasmidFinder: commit 3e77502, 2024-03-07 (downloaded 20241004) /path/to/data d1e607b 694919f 3e77502
6edfb4b6db85 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/staramr commit 45daaecba3332d984a900727bf348ffb07a07154
iuc
parents:
diff changeset
11 staramr_downloaded_20112024_resfinder_d1e607b_pointfinder_694919f_plasmidfinder_3e77502 starAMR databases with ResFinder: 2.4.0_d1e607b_2024-08-06, PointFinder: 4.1.1_694919f_2024-08-08, PlasmidFinder: 3e77502_2024-03-07 resfinder_d1e607b_pointfinder_694919f_plasmidfinder_3e77502 d1e607b 694919f 3e77502