Mercurial > repos > iuc > stringtie

comparison test-data/stringtie_out12.gtf @ 20:cef79931dda5 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stringtie commit 7f649c10c5d874f466122af0d24803a4c6affabb
author iuc
date Wed, 27 Jul 2022 09:28:15 +0000
parents 258d696dbd7e
children 914cfcba0ec8
comparison
equal deleted inserted replaced
19:333a6e13b622 20:cef79931dda5
1 # stringtie short_sorted.sam long_sorted.sam -E 25 -o /tmp/tmpgqe071sy/files/9/5/b/dataset_95b1ec38-2151-43e7-8584-aa4aff72e957.dat -p 1 -f 0.15 -m 200 -a 10 -j 1 -c 2 -g 50 -M 0.95 1 # StringTie version 2\.1\.7
2 # StringTie version 2.1.7 2 # stringtie short_sorted\.sam long_sorted\.sam -E 25 -o /[/.\-_A-Za-z0-9]+\.dat -p 2 -f 0\.15 -m 200 -a 10 -j 1 -c 2 -g 50 -M 0\.95
3 chr19 StringTie transcript 567221 571736 1000 - . gene_id "STRG.1"; transcript_id "STRG.1.1"; cov "5.043160"; FPKM "15396.282227"; TPM "50141.804688"; 3 chr16\tStringTie\texon\t784986\t786377\t1000\t-\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "1"; cov "33\.698273";
4 chr19 StringTie exon 567221 567648 1000 - . gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "1"; cov "5.815421"; 4 chr16\tStringTie\texon\t786827\t786928\t1000\t-\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "2"; cov "24\.970589";
5 chr19 StringTie exon 571440 571596 1000 - . gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "2"; cov "3.573089"; 5 chr16\tStringTie\texon\t787077\t787179\t1000\t-\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "3"; cov "24\.747572";
6 chr19 StringTie exon 571697 571736 1000 - . gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "3"; cov "2.550000"; 6 chr16\tStringTie\texon\t787354\t787477\t1000\t-\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "4"; cov "25\.967739";
7 chr19 StringTie transcript 571310 583493 1000 + . gene_id "STRG.2"; transcript_id "STRG.2.1"; cov "4.701019"; FPKM "14351.757812"; TPM "46740.058594"; 7 chr16\tStringTie\texon\t787556\t787744\t1000\t-\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "5"; cov "21\.576719";
8 chr19 StringTie exon 571310 571579 1000 + . gene_id "STRG.2"; transcript_id "STRG.2.1"; exon_number "1"; cov "5.888981"; 8 chr16\tStringTie\texon\t788256\t788300\t1000\t-\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "6"; cov "2\.600000";
9 chr19 StringTie exon 580379 580461 1000 + . gene_id "STRG.2"; transcript_id "STRG.2.1"; exon_number "2"; cov "4.879346"; 9 chr16\tStringTie\texon\t789075\t789125\t1000\t\+\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "1"; cov "2\.764706";
10 chr19 StringTie exon 580646 580782 1000 + . gene_id "STRG.2"; transcript_id "STRG.2.1"; exon_number "3"; cov "4.616338"; 10 chr16\tStringTie\texon\t789210\t789360\t1000\t\+\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "2"; cov "12\.516557";
11 chr19 StringTie exon 581315 581610 1000 + . gene_id "STRG.2"; transcript_id "STRG.2.1"; exon_number "4"; cov "4.479919"; 11 chr16\tStringTie\texon\t789547\t789715\t1000\t\+\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "3"; cov "20\.360947";
12 chr19 StringTie exon 582514 582582 1000 + . gene_id "STRG.2"; transcript_id "STRG.2.1"; exon_number "5"; cov "4.504012"; 12 chr16\tStringTie\texon\t790177\t790269\t1000\t\+\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "4"; cov "18\.048386";
13 chr19 StringTie exon 582750 583493 1000 + . gene_id "STRG.2"; transcript_id "STRG.2.1"; exon_number "6"; cov "4.371838"; 13 chr16\tStringTie\texon\t790347\t790399\t1000\t\+\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "5"; cov "21\.396227";
14 chr19 StringTie transcript 572567 583493 1000 + . gene_id "STRG.2"; transcript_id "STRG.2.2"; cov "6.933517"; FPKM "21167.359375"; TPM "68936.750000"; 14 chr16\tStringTie\texon\t790525\t790666\t1000\t\+\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "6"; cov "19\.359156";
15 chr19 StringTie exon 572567 572701 1000 + . gene_id "STRG.2"; transcript_id "STRG.2.2"; exon_number "1"; cov "3.325926"; 15 chr16\tStringTie\texon\t791161\t791370\t1000\t\+\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "7"; cov "22\.309525";
16 chr19 StringTie exon 577774 578121 1000 + . gene_id "STRG.2"; transcript_id "STRG.2.2"; exon_number "2"; cov "6.436781"; 16 chr16\tStringTie\texon\t791851\t791948\t1000\t\+\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "8"; cov "16\.336735";
17 chr19 StringTie exon 579500 579656 1000 + . gene_id "STRG.2"; transcript_id "STRG.2.2"; exon_number "3"; cov "7.000000"; 17 chr16\tStringTie\texon\t792224\t792347\t1000\t\+\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "9"; cov "19\.322580";
18 chr19 StringTie exon 580379 580461 1000 + . gene_id "STRG.2"; transcript_id "STRG.2.2"; exon_number "4"; cov "8.120653"; 18 chr16\tStringTie\texon\t792439\t792590\t1000\t\+\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "10"; cov "8\.835526";
19 chr19 StringTie exon 580646 580782 1000 + . gene_id "STRG.2"; transcript_id "STRG.2.2"; exon_number "5"; cov "7.682931"; 19 chr16\tStringTie\texon\t792718\t792811\t1000\t\+\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "11"; cov "21\.244680";
20 chr19 StringTie exon 581315 581610 1000 + . gene_id "STRG.2"; transcript_id "STRG.2.2"; exon_number "6"; cov "7.455892"; 20 chr16\tStringTie\texon\t792966\t793064\t1000\t\+\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "12"; cov "19\.494951";
21 chr19 StringTie exon 582514 582582 1000 + . gene_id "STRG.2"; transcript_id "STRG.2.2"; exon_number "7"; cov "7.495987"; 21 chr16\tStringTie\texon\t793144\t793274\t1000\t\+\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "13"; cov "16\.229008";
22 chr19 StringTie exon 582750 583493 1000 + . gene_id "STRG.2"; transcript_id "STRG.2.2"; exon_number "8"; cov "7.276011"; 22 chr16\tStringTie\texon\t794054\t794201\t1000\t\+\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "14"; cov "22\.121622";
23 chr19 StringTie transcript 589891 617159 1000 + . gene_id "STRG.3"; transcript_id "STRG.3.1"; cov "19.937536"; FPKM "60867.378906"; TPM "198229.687500"; 23 chr16\tStringTie\texon\t795132\t795356\t1000\t\+\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "15"; cov "30\.586666";
24 chr19 StringTie exon 589891 590577 1000 + . gene_id "STRG.3"; transcript_id "STRG.3.1"; exon_number "1"; cov "18.537117"; 24 chr16\tStringTie\texon\t795685\t795834\t1000\t\+\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "16"; cov "14\.393333";
25 chr19 StringTie exon 603544 603967 1000 + . gene_id "STRG.3"; transcript_id "STRG.3.1"; exon_number "2"; cov "21.000000"; 25 chr16\tStringTie\texon\t795947\t796077\t1000\t\+\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "17"; cov "27\.061069";
26 chr19 StringTie exon 605061 605222 1000 + . gene_id "STRG.3"; transcript_id "STRG.3.1"; exon_number "3"; cov "20.981482"; 26 chr16\tStringTie\texon\t796717\t796861\t1000\t\+\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "18"; cov "39\.082760";
27 chr19 StringTie exon 607964 608182 1000 + . gene_id "STRG.3"; transcript_id "STRG.3.1"; exon_number "4"; cov "21.000000"; 27 chr16\tStringTie\texon\t796961\t797092\t1000\t\+\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "19"; cov "43\.295456";
28 chr19 StringTie exon 610259 610405 1000 + . gene_id "STRG.3"; transcript_id "STRG.3.1"; exon_number "5"; cov "21.000000"; 28 chr16\tStringTie\texon\t797694\t797751\t1000\t\+\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "20"; cov "53\.689655";
29 chr19 StringTie exon 613248 613488 1000 + . gene_id "STRG.3"; transcript_id "STRG.3.1"; exon_number "6"; cov "21.000000"; 29 chr16\tStringTie\texon\t797839\t798048\t1000\t\+\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "21"; cov "44\.473808";
30 chr19 StringTie exon 613852 614016 1000 + . gene_id "STRG.3"; transcript_id "STRG.3.1"; exon_number "7"; cov "21.000000"; 30 chr16\tStringTie\texon\t854482\t854706\t1000\t-\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "1"; cov "3\.262222";
31 chr19 StringTie exon 615795 617159 1000 + . gene_id "STRG.3"; transcript_id "STRG.3.1"; exon_number "8"; cov "19.587545"; 31 chr16\tStringTie\texon\t868944\t869056\t1000\t-\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "2"; cov "9\.176991";
32 chr16 StringTie transcript 784986 788300 1000 - . gene_id "STRG.4"; transcript_id "STRG.4.1"; cov "30.393349"; FPKM "92787.968750"; TPM "302187.000000"; 32 chr16\tStringTie\texon\t869883\t870066\t1000\t-\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "3"; cov "11\.130435";
33 chr16 StringTie exon 784986 786377 1000 - . gene_id "STRG.4"; transcript_id "STRG.4.1"; exon_number "1"; cov "33.698273"; 33 chr16\tStringTie\texon\t870729\t870882\t1000\t-\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "4"; cov "10\.467532";
34 chr16 StringTie exon 786827 786928 1000 - . gene_id "STRG.4"; transcript_id "STRG.4.1"; exon_number "2"; cov "24.970589"; 34 chr16\tStringTie\texon\t871161\t871341\t1000\t-\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "5"; cov "3\.563536";
35 chr16 StringTie exon 787077 787179 1000 - . gene_id "STRG.4"; transcript_id "STRG.4.1"; exon_number "3"; cov "24.747572"; 35 chr16\tStringTie\texon\t879570\t879737\t1000\t-\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "6"; cov "2\.625000";
36 chr16 StringTie exon 787354 787477 1000 - . gene_id "STRG.4"; transcript_id "STRG.4.1"; exon_number "4"; cov "25.967739"; 36 chr16\tStringTie\texon\t893007\t893072\t1000\t-\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "7"; cov "3\.242424";
37 chr16 StringTie exon 787556 787744 1000 - . gene_id "STRG.4"; transcript_id "STRG.4.1"; exon_number "5"; cov "21.576719"; 37 chr16\tStringTie\texon\t910931\t911074\t1000\t-\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "8"; cov "2\.770833";
38 chr16 StringTie exon 788256 788300 1000 - . gene_id "STRG.4"; transcript_id "STRG.4.1"; exon_number "6"; cov "2.600000"; 38 chr16\tStringTie\texon\t934126\t934254\t1000\t-\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "1"; cov "1\.131783";
39 chr16 StringTie transcript 789075 798048 1000 + . gene_id "STRG.5"; transcript_id "STRG.5.1"; cov "24.152929"; FPKM "73736.570312"; TPM "240141.406250"; 39 chr16\tStringTie\texon\t954357\t954666\t1000\t-\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "2"; cov "4\.341936";
40 chr16 StringTie exon 789075 789125 1000 + . gene_id "STRG.5"; transcript_id "STRG.5.1"; exon_number "1"; cov "2.764706"; 40 chr16\tStringTie\texon\t970788\t970901\t1000\t-\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "3"; cov "1\.798246";
41 chr16 StringTie exon 789210 789360 1000 + . gene_id "STRG.5"; transcript_id "STRG.5.1"; exon_number "2"; cov "12.516557"; 41 chr16\tStringTie\ttranscript\t784986\t788300\t1000\t-\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; cov "30\.393349"; FPKM "92787\.968750"; TPM "302187\.000000";
42 chr16 StringTie exon 789547 789715 1000 + . gene_id "STRG.5"; transcript_id "STRG.5.1"; exon_number "3"; cov "20.360947"; 42 chr16\tStringTie\ttranscript\t789075\t798048\t1000\t\+\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; cov "24\.152929"; FPKM "73736\.570312"; TPM "240141\.406250";
43 chr16 StringTie exon 790177 790269 1000 + . gene_id "STRG.5"; transcript_id "STRG.5.1"; exon_number "4"; cov "18.048386"; 43 chr16\tStringTie\ttranscript\t854482\t911074\t1000\t-\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; cov "5\.773279"; FPKM "17625\.265625"; TPM "57401\.042969";
44 chr16 StringTie exon 790347 790399 1000 + . gene_id "STRG.5"; transcript_id "STRG.5.1"; exon_number "5"; cov "21.396227"; 44 chr16\tStringTie\ttranscript\t934126\t970901\t1000\t-\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; cov "3\.068716"; FPKM "9368\.495117"; TPM "30510\.824219";
45 chr16 StringTie exon 790525 790666 1000 + . gene_id "STRG.5"; transcript_id "STRG.5.1"; exon_number "6"; cov "19.359156"; 45 chr19\tStringTie\texon\t567221\t567648\t1000\t-\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "1"; cov "5\.815421";
46 chr16 StringTie exon 791161 791370 1000 + . gene_id "STRG.5"; transcript_id "STRG.5.1"; exon_number "7"; cov "22.309525"; 46 chr19\tStringTie\texon\t571310\t571579\t1000\t\+\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "1"; cov "5\.888981";
47 chr16 StringTie exon 791851 791948 1000 + . gene_id "STRG.5"; transcript_id "STRG.5.1"; exon_number "8"; cov "16.336735"; 47 chr19\tStringTie\texon\t571440\t571596\t1000\t-\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "2"; cov "3\.573089";
48 chr16 StringTie exon 792224 792347 1000 + . gene_id "STRG.5"; transcript_id "STRG.5.1"; exon_number "9"; cov "19.322580"; 48 chr19\tStringTie\texon\t571697\t571736\t1000\t-\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "3"; cov "2\.550000";
49 chr16 StringTie exon 792439 792590 1000 + . gene_id "STRG.5"; transcript_id "STRG.5.1"; exon_number "10"; cov "8.835526"; 49 chr19\tStringTie\texon\t572567\t572701\t1000\t\+\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "1"; cov "3\.325926";
50 chr16 StringTie exon 792718 792811 1000 + . gene_id "STRG.5"; transcript_id "STRG.5.1"; exon_number "11"; cov "21.244680"; 50 chr19\tStringTie\texon\t577774\t578121\t1000\t\+\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "2"; cov "6\.436781";
51 chr16 StringTie exon 792966 793064 1000 + . gene_id "STRG.5"; transcript_id "STRG.5.1"; exon_number "12"; cov "19.494951"; 51 chr19\tStringTie\texon\t579500\t579656\t1000\t\+\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "3"; cov "7\.000000";
52 chr16 StringTie exon 793144 793274 1000 + . gene_id "STRG.5"; transcript_id "STRG.5.1"; exon_number "13"; cov "16.229008"; 52 chr19\tStringTie\texon\t580379\t580461\t1000\t\+\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "2"; cov "4\.879346";
53 chr16 StringTie exon 794054 794201 1000 + . gene_id "STRG.5"; transcript_id "STRG.5.1"; exon_number "14"; cov "22.121622"; 53 chr19\tStringTie\texon\t580379\t580461\t1000\t\+\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "4"; cov "8\.120653";
54 chr16 StringTie exon 795132 795356 1000 + . gene_id "STRG.5"; transcript_id "STRG.5.1"; exon_number "15"; cov "30.586666"; 54 chr19\tStringTie\texon\t580646\t580782\t1000\t\+\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "3"; cov "4\.616338";
55 chr16 StringTie exon 795685 795834 1000 + . gene_id "STRG.5"; transcript_id "STRG.5.1"; exon_number "16"; cov "14.393333"; 55 chr19\tStringTie\texon\t580646\t580782\t1000\t\+\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "5"; cov "7\.682931";
56 chr16 StringTie exon 795947 796077 1000 + . gene_id "STRG.5"; transcript_id "STRG.5.1"; exon_number "17"; cov "27.061069"; 56 chr19\tStringTie\texon\t581315\t581610\t1000\t\+\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "4"; cov "4\.479919";
57 chr16 StringTie exon 796717 796861 1000 + . gene_id "STRG.5"; transcript_id "STRG.5.1"; exon_number "18"; cov "39.082760"; 57 chr19\tStringTie\texon\t581315\t581610\t1000\t\+\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "6"; cov "7\.455892";
58 chr16 StringTie exon 796961 797092 1000 + . gene_id "STRG.5"; transcript_id "STRG.5.1"; exon_number "19"; cov "43.295456"; 58 chr19\tStringTie\texon\t582514\t582582\t1000\t\+\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "5"; cov "4\.504012";
59 chr16 StringTie exon 797694 797751 1000 + . gene_id "STRG.5"; transcript_id "STRG.5.1"; exon_number "20"; cov "53.689655"; 59 chr19\tStringTie\texon\t582514\t582582\t1000\t\+\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "7"; cov "7\.495987";
60 chr16 StringTie exon 797839 798048 1000 + . gene_id "STRG.5"; transcript_id "STRG.5.1"; exon_number "21"; cov "44.473808"; 60 chr19\tStringTie\texon\t582750\t583493\t1000\t\+\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "6"; cov "4\.371838";
61 chr16 StringTie transcript 854482 911074 1000 - . gene_id "STRG.6"; transcript_id "STRG.6.1"; cov "5.773279"; FPKM "17625.265625"; TPM "57401.042969"; 61 chr19\tStringTie\texon\t582750\t583493\t1000\t\+\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "8"; cov "7\.276011";
62 chr16 StringTie exon 854482 854706 1000 - . gene_id "STRG.6"; transcript_id "STRG.6.1"; exon_number "1"; cov "3.262222"; 62 chr19\tStringTie\texon\t589891\t590577\t1000\t\+\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "1"; cov "18\.537117";
63 chr16 StringTie exon 868944 869056 1000 - . gene_id "STRG.6"; transcript_id "STRG.6.1"; exon_number "2"; cov "9.176991"; 63 chr19\tStringTie\texon\t603544\t603967\t1000\t\+\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "2"; cov "21\.000000";
64 chr16 StringTie exon 869883 870066 1000 - . gene_id "STRG.6"; transcript_id "STRG.6.1"; exon_number "3"; cov "11.130435"; 64 chr19\tStringTie\texon\t605061\t605222\t1000\t\+\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "3"; cov "20\.981482";
65 chr16 StringTie exon 870729 870882 1000 - . gene_id "STRG.6"; transcript_id "STRG.6.1"; exon_number "4"; cov "10.467532"; 65 chr19\tStringTie\texon\t607964\t608182\t1000\t\+\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "4"; cov "21\.000000";
66 chr16 StringTie exon 871161 871341 1000 - . gene_id "STRG.6"; transcript_id "STRG.6.1"; exon_number "5"; cov "3.563536"; 66 chr19\tStringTie\texon\t610259\t610405\t1000\t\+\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "5"; cov "21\.000000";
67 chr16 StringTie exon 879570 879737 1000 - . gene_id "STRG.6"; transcript_id "STRG.6.1"; exon_number "6"; cov "2.625000"; 67 chr19\tStringTie\texon\t613248\t613488\t1000\t\+\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "6"; cov "21\.000000";
68 chr16 StringTie exon 893007 893072 1000 - . gene_id "STRG.6"; transcript_id "STRG.6.1"; exon_number "7"; cov "3.242424"; 68 chr19\tStringTie\texon\t613852\t614016\t1000\t\+\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "7"; cov "21\.000000";
69 chr16 StringTie exon 910931 911074 1000 - . gene_id "STRG.6"; transcript_id "STRG.6.1"; exon_number "8"; cov "2.770833"; 69 chr19\tStringTie\texon\t615795\t617159\t1000\t\+\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "8"; cov "19\.587545";
70 chr16 StringTie transcript 934126 970901 1000 - . gene_id "STRG.7"; transcript_id "STRG.7.1"; cov "3.068716"; FPKM "9368.495117"; TPM "30510.824219"; 70 chr19\tStringTie\ttranscript\t567221\t571736\t1000\t-\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; cov "5\.043160"; FPKM "15396\.282227"; TPM "50141\.804688";
71 chr16 StringTie exon 934126 934254 1000 - . gene_id "STRG.7"; transcript_id "STRG.7.1"; exon_number "1"; cov "1.131783"; 71 chr19\tStringTie\ttranscript\t571310\t583493\t1000\t\+\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; cov "4\.701019"; FPKM "14351\.757812"; TPM "46740\.058594";
72 chr16 StringTie exon 954357 954666 1000 - . gene_id "STRG.7"; transcript_id "STRG.7.1"; exon_number "2"; cov "4.341936"; 72 chr19\tStringTie\ttranscript\t572567\t583493\t1000\t\+\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; cov "6\.933517"; FPKM "21167\.359375"; TPM "68936\.750000";
73 chr16 StringTie exon 970788 970901 1000 - . gene_id "STRG.7"; transcript_id "STRG.7.1"; exon_number "3"; cov "1.798246"; 73 chr19\tStringTie\ttranscript\t589891\t617159\t1000\t\+\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; cov "19\.937536"; FPKM "60867\.378906"; TPM "198229\.687500";