Mercurial > repos > iuc > stringtie

comparison test-data/stringtie_out1.gtf @ 6:d0bb240d7525 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stringtie commit acdc3dfe5fd6317ae57899aa0e83130dff7460e7
author iuc
date Wed, 13 Jul 2016 14:48:26 -0400
parents f504b3b7e49d
children c84d44519b2e
comparison
equal deleted inserted replaced
5:f504b3b7e49d 6:d0bb240d7525
1 # stringtie /tmp/tmpoOYb63/files/000/dataset_1.dat -o /tmp/tmpoOYb63/files/000/dataset_2.dat -p 1 1 # stringtie /var/folders/s0/0v_znjzj3kb3jbhlqt9kyb800000gn/T/tmpd2SP9G/files/000/dataset_1.dat -o /var/folders/s0/0v_znjzj3kb3jbhlqt9kyb800000gn/T/tmpd2SP9G/files/000/dataset_2.dat -p 1
2 # StringTie version 1.1.0 2 # StringTie version 1.2.3
3 test_chromosome StringTie transcript 53 550 1000 + . gene_id "STRG.1"; transcript_id "STRG.1.1"; cov "44.682419"; FPKM "3273437.500000"; TPM "995243.375000"; 3 test_chromosome StringTie transcript 53 550 1000 + . gene_id "STRG.1"; transcript_id "STRG.1.1"; cov "44.682419"; FPKM "3273437.500000"; TPM "975770.250000";
4 test_chromosome StringTie exon 53 250 1000 + . gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "1"; cov "48.948147"; 4 test_chromosome StringTie exon 53 250 1000 + . gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "1"; cov "48.948147";
5 test_chromosome StringTie exon 351 400 1000 + . gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "2"; cov "51.382565"; 5 test_chromosome StringTie exon 351 400 1000 + . gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "2"; cov "51.382565";
6 test_chromosome StringTie exon 501 550 1000 + . gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "3"; cov "21.090000"; 6 test_chromosome StringTie exon 501 550 1000 + . gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "3"; cov "21.090000";