Mercurial > repos > iuc > stringtie
comparison stringtie_merge.xml @ 15:dd4df992d93d draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stringtie commit a834a41c94d184df80e45ffa2339723826a075b1
| author | iuc |
|---|---|
| date | Tue, 24 Jul 2018 10:23:37 -0400 |
| parents | 6e45b443ef1f |
| children | 258d696dbd7e |
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| 14:eafd5dc95228 | 15:dd4df992d93d |
|---|---|
| 1 <tool id="stringtie_merge" name="StringTie merge" version="1.3.3"> | 1 <tool id="stringtie_merge" name="StringTie merge" version="@TOOL_VERSION@"> |
| 2 <description>transcripts</description> | 2 <description>transcripts</description> |
| 3 <macros> | 3 <macros> |
| 4 <import>macros.xml</import> | 4 <import>macros.xml</import> |
| 5 </macros> | 5 </macros> |
| 6 <expand macro="requirements" /> | 6 <expand macro="requirements" /> |
| 38 </outputs> | 38 </outputs> |
| 39 <tests> | 39 <tests> |
| 40 <test> | 40 <test> |
| 41 <param name="input_gtf" ftype="gtf" value="stringtie_out1.gtf,stringtie_out2.gtf,stringtie_out3.gtf,stringtie_out4.gtf" /> | 41 <param name="input_gtf" ftype="gtf" value="stringtie_out1.gtf,stringtie_out2.gtf,stringtie_out3.gtf,stringtie_out4.gtf" /> |
| 42 <param name="guide_gff" ftype="gtf" value="stringtie_in.gtf" /> | 42 <param name="guide_gff" ftype="gtf" value="stringtie_in.gtf" /> |
| 43 <output name="out_gtf" file="stringtie_merge_out1.gtf" ftype="gtf" lines_diff="2" /> | 43 <output name="out_gtf" file="stringtie_merge_out1.gtf" ftype="gtf" lines_diff="4" /> |
| 44 </test> | 44 </test> |
| 45 <test> | 45 <test> |
| 46 <param name="input_gtf" ftype="gtf" value="stringtie_merge_in1.gtf,stringtie_merge_in2.gtf" /> | 46 <param name="input_gtf" ftype="gtf" value="stringtie_merge_in1.gtf,stringtie_merge_in2.gtf" /> |
| 47 <param name="guide_gff" ftype="gtf" value="stringtie_merge_in3.gtf" /> | 47 <param name="guide_gff" ftype="gtf" value="stringtie_merge_in3.gtf" /> |
| 48 <output name="out_gtf" file="stringtie_merge_out2.gtf" ftype="gtf" lines_diff="2" /> | 48 <output name="out_gtf" file="stringtie_merge_out2.gtf" ftype="gtf" lines_diff="4" /> |
| 49 </test> | 49 </test> |
| 50 <test> | 50 <test> |
| 51 <param name="input_gtf" ftype="gtf" value="stringtie_merge_in1.gtf,stringtie_merge_in2.gtf" /> | 51 <param name="input_gtf" ftype="gtf" value="stringtie_merge_in1.gtf,stringtie_merge_in2.gtf" /> |
| 52 <output name="out_gtf" ftype="gtf"> | 52 <output name="out_gtf" ftype="gtf"> |
| 53 <assert_contents> | 53 <assert_contents> |