Mercurial > repos > iuc > stringtie
diff test-data/stringtie_out12.gtf @ 21:914cfcba0ec8 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stringtie commit 8923485156dc1150213ad1f324aa16aaef4ae643
author | iuc |
---|---|
date | Mon, 31 Oct 2022 20:08:02 +0000 |
parents | cef79931dda5 |
children | ae618321f34a |
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--- a/test-data/stringtie_out12.gtf Wed Jul 27 09:28:15 2022 +0000 +++ b/test-data/stringtie_out12.gtf Mon Oct 31 20:08:02 2022 +0000 @@ -1,5 +1,5 @@ -# StringTie version 2\.1\.7 -# stringtie short_sorted\.sam long_sorted\.sam -E 25 -o /[/.\-_A-Za-z0-9]+\.dat -p 2 -f 0\.15 -m 200 -a 10 -j 1 -c 2 -g 50 -M 0\.95 +# StringTie version 2\.2\.1 +# stringtie /[-_/a-zA-Z0-9]+\.dat /[-_/a-zA-Z0-9]+\.dat -E 25 -o /[-_/a-zA-Z0-9]+\.dat -p [0-9]+ -f 0\.15 -m 200 -a 10 -j 1 -c 2 -g 50 -M 0\.95 chr16\tStringTie\texon\t784986\t786377\t1000\t-\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "1"; cov "33\.698273"; chr16\tStringTie\texon\t786827\t786928\t1000\t-\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "2"; cov "24\.970589"; chr16\tStringTie\texon\t787077\t787179\t1000\t-\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "3"; cov "24\.747572";