Mercurial > repos > iuc > stringtie
diff test-data/stringtie_out12.gtf @ 22:ae618321f34a draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stringtie commit 12bd91ad0bc0a6471f34d1dd342c943f222a17d2
| author | iuc |
|---|---|
| date | Mon, 30 Jan 2023 12:01:28 +0000 |
| parents | 914cfcba0ec8 |
| children |
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--- a/test-data/stringtie_out12.gtf Mon Oct 31 20:08:02 2022 +0000 +++ b/test-data/stringtie_out12.gtf Mon Jan 30 12:01:28 2023 +0000 @@ -1,5 +1,5 @@ # StringTie version 2\.2\.1 -# stringtie /[-_/a-zA-Z0-9]+\.dat /[-_/a-zA-Z0-9]+\.dat -E 25 -o /[-_/a-zA-Z0-9]+\.dat -p [0-9]+ -f 0\.15 -m 200 -a 10 -j 1 -c 2 -g 50 -M 0\.95 +# stringtie /[-_/a-zA-Z0-9]+\.dat /[-_/a-zA-Z0-9]+\.dat -E 25 -o /[-_/a-zA-Z0-9]+\.dat -p [0-9]+ -f 0\.01 -m 200 -a 10 -j 1 -c 1 -g 50 -M 1 chr16\tStringTie\texon\t784986\t786377\t1000\t-\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "1"; cov "33\.698273"; chr16\tStringTie\texon\t786827\t786928\t1000\t-\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "2"; cov "24\.970589"; chr16\tStringTie\texon\t787077\t787179\t1000\t-\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "3"; cov "24\.747572";