Mercurial > repos > iuc > stringtie

diff stringtie.xml @ 14:eafd5dc95228 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stringtie commit 57441e46de7ca04f25df6e43152dc210d4b32712
author iuc
date Fri, 04 May 2018 08:37:37 -0400
parents a305d75e13f2
children dd4df992d93d
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--- a/stringtie.xml	Thu Apr 12 17:30:07 2018 -0400
+++ b/stringtie.xml	Fri May 04 08:37:37 2018 -0400
@@ -103,9 +103,9 @@
         #end if
         ## Sort count files on the first column
         &&
-        tail -n +2 gene_counts.csv | sort -t"\${TAB}" -k1 >> '$gene_counts'
+        tail -n +2 gene_counts.csv | sort -t"\${TAB}" -k1,1 >> '$gene_counts'
         &&
-        tail -n +2 transcript_counts.csv | sort -t"\${TAB}" -k1 >> '$transcript_counts'
+        tail -n +2 transcript_counts.csv | sort -t"\${TAB}" -k1,1 >> '$transcript_counts'
     #end if
 #end if
     ]]></command>