Mercurial > repos > iuc > stringtie
diff test-data/stringtie_out6.gtf @ 16:eba36e001f45 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stringtie commit 7dbb0fbe5446140f40fed36e45f42ec8d34bbc78
| author | iuc |
|---|---|
| date | Fri, 03 May 2019 11:05:13 -0400 |
| parents | dd4df992d93d |
| children | 1ebd14235b92 |
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--- a/test-data/stringtie_out6.gtf Tue Jul 24 10:23:37 2018 -0400 +++ b/test-data/stringtie_out6.gtf Fri May 03 11:05:13 2019 -0400 @@ -1,6 +1,6 @@ -# stringtie /tmp/tmpSoPTYX/files/000/dataset_1.dat -o /tmp/tmpSoPTYX/files/000/dataset_3.dat -p 1 -G guide.gff -C /tmp/tmpSoPTYX/files/000/dataset_4.dat -e -b ./special_de_output/sample1/ -f 0.15 -m 200 -a 10 -j 1 -c 2 -g 50 -M 0.95 -# StringTie version 1.3.4d -test_chromosome StringTie transcript 53 550 1000 + . gene_id "CUFF.1"; transcript_id "CUFF.1.1"; cov "45.795296"; FPKM "3354966.750000"; TPM "1000000.000000"; +# stringtie /tmp/tmpcy98bsa4/files/000/dataset_20.dat -o /tmp/tmpcy98bsa4/files/000/dataset_22.dat -p 1 -G guide.gff -C /tmp/tmpcy98bsa4/files/000/dataset_23.dat -e -b ./special_de_output/sample1/ -f 0.15 -m 200 -a 10 -j 1 -c 2 -g 50 -M 0.95 +# StringTie version 1.3.6 +test_chromosome StringTie transcript 53 550 1000 + . gene_id "CUFF.1"; transcript_id "CUFF.1.1"; cov "45.795296"; FPKM "3354966.739927"; TPM "1000000.006216"; test_chromosome StringTie exon 53 250 1000 + . gene_id "CUFF.1"; transcript_id "CUFF.1.1"; exon_number "1"; cov "49.777779"; test_chromosome StringTie exon 351 400 1000 + . gene_id "CUFF.1"; transcript_id "CUFF.1.1"; exon_number "2"; cov "54.160004"; test_chromosome StringTie exon 501 550 1000 + . gene_id "CUFF.1"; transcript_id "CUFF.1.1"; exon_number "3"; cov "21.660000";