Mercurial > repos > iuc > stringtie
diff test-data/stringtie_out2.gtf @ 5:f504b3b7e49d draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stringtie commit 65c9ce2fdc2b4ce892df8e456f18b859a85c410a
| author | iuc |
|---|---|
| date | Wed, 21 Oct 2015 16:07:42 -0400 |
| parents | 520e0988ec1c |
| children | d0bb240d7525 |
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--- a/test-data/stringtie_out2.gtf Wed Aug 12 07:07:40 2015 -0400 +++ b/test-data/stringtie_out2.gtf Wed Oct 21 16:07:42 2015 -0400 @@ -1,4 +1,6 @@ -test_chromosome StringTie transcript 53 550 1000 + . gene_id "STRG.1"; transcript_id "STRG.1.1"; cov "44.724823"; FPKM "3276543.750000"; -test_chromosome StringTie exon 53 250 1000 + . gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "1"; cov "49.011967"; +# stringtie /tmp/tmpoOYb63/files/000/dataset_9.dat -o /tmp/tmpoOYb63/files/000/dataset_10.dat -p 1 -l STRG -f 0.17 -m 200 -a 10 -j 1 -c 2 -g 50 -M 0.95 +# StringTie version 1.1.0 +test_chromosome StringTie transcript 53 550 1000 + . gene_id "STRG.1"; transcript_id "STRG.1.1"; cov "44.682419"; FPKM "3273437.500000"; TPM "995243.375000"; +test_chromosome StringTie exon 53 250 1000 + . gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "1"; cov "48.948147"; test_chromosome StringTie exon 351 400 1000 + . gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "2"; cov "51.382565"; test_chromosome StringTie exon 501 550 1000 + . gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "3"; cov "21.090000";