Mercurial > repos > iuc > stringtie
diff test-data/stringtie_out3.gtf @ 5:f504b3b7e49d draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stringtie commit 65c9ce2fdc2b4ce892df8e456f18b859a85c410a
| author | iuc |
|---|---|
| date | Wed, 21 Oct 2015 16:07:42 -0400 |
| parents | 520e0988ec1c |
| children | d0bb240d7525 |
line wrap: on
line diff
--- a/test-data/stringtie_out3.gtf Wed Aug 12 07:07:40 2015 -0400 +++ b/test-data/stringtie_out3.gtf Wed Oct 21 16:07:42 2015 -0400 @@ -1,4 +1,6 @@ -test_chromosome StringTie transcript 53 550 1000 + . gene_id "STRG.1"; transcript_id "STRG.1.1"; reference_id "CUFF.1.1"; ref_gene_id "CUFF.1"; cov "44.724823"; FPKM "3276543.750000"; +# stringtie /tmp/tmpoOYb63/files/000/dataset_16.dat -o /tmp/tmpoOYb63/files/000/dataset_18.dat -p 1 -C /tmp/tmpoOYb63/files/000/dataset_20.dat -G /tmp/tmpoOYb63/files/000/dataset_17.dat +# StringTie version 1.1.0 +test_chromosome StringTie transcript 53 550 1000 + . gene_id "STRG.1"; transcript_id "STRG.1.1"; reference_id "CUFF.1.1"; ref_gene_id "CUFF.1"; cov "44.724823"; FPKM "3276543.750000"; TPM "996187.875000"; test_chromosome StringTie exon 53 250 1000 + . gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "1"; reference_id "CUFF.1.1"; ref_gene_id "CUFF.1"; cov "49.011967"; test_chromosome StringTie exon 351 400 1000 + . gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "2"; reference_id "CUFF.1.1"; ref_gene_id "CUFF.1"; cov "51.382565"; test_chromosome StringTie exon 501 550 1000 + . gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "3"; reference_id "CUFF.1.1"; ref_gene_id "CUFF.1"; cov "21.090000";