Mercurial > repos > iuc > suite_bcftools_1_3

changeset 9:0e6867bb62f2 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 2684e1443f03bfe2ae20c31d23817415ec8f7e69
author iuc
date Thu, 21 Feb 2019 16:11:15 -0500
parents 488e382af384
children 79bdd611a200
files repository_dependencies.xml
diffstat 1 files changed, 35 insertions(+), 34 deletions(-) [+]
line wrap: on
line diff
--- a/repository_dependencies.xml	Tue Dec 12 14:06:37 2017 -0500
+++ b/repository_dependencies.xml	Thu Feb 21 16:11:15 2019 -0500
@@ -1,34 +1,35 @@
-<?xml version="1.0"?>
-<repositories description="A suite of Galaxy tools designed to work with version 1.3 of the bcftools package.">  <repository changeset_revision="1829900b5dcd" name="bcftools_consensus" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="71186bb66ca2" name="bcftools_plugin_color_chrs" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="0594ea1417c8" name="bcftools_plugin_tag2tag" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="b641062a2587" name="bcftools_stats" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="85ee7e6c4204" name="bcftools_merge" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="d43eb39b989e" name="bcftools_reheader" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="a404f786a94c" name="bcftools_norm" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="157ffcdd3fa7" name="bcftools_plugin_fixploidy" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="0fe007201caf" name="bcftools_plugin_dosage" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="bca7ce81688f" name="bcftools_plugin_fill_tags" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="96d2000977ab" name="bcftools_plugin_frameshifts" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="501bfb078342" name="bcftools_gtcheck" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="a367a15c6de5" name="bcftools_plugin_mendelian" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="265fe0f9ea64" name="bcftools_annotate" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="96d0145c041a" name="bcftools_plugin_missing2ref" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="963a3635b2e1" name="bcftools_filter" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="7cbf3c66d4ad" name="bcftools_csq" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="5296d26b0373" name="bcftools_roh" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="adee7e8b746f" name="bcftools_query_list_samples" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="1f2183a23823" name="bcftools_convert_to_vcf" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="c9935c9e8a24" name="bcftools_query" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="c803c34361e0" name="bcftools_isec" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="f430a1ec7ee4" name="bcftools_concat" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="46eb13bc2c73" name="bcftools_plugin_setgt" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="3a233c8eb814" name="bcftools_view" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="92c0aff8b53e" name="bcftools_convert_from_vcf" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="29ba253e2e05" name="bcftools_plugin_impute_info" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="5ad5d4243987" name="bcftools_plugin_counts" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="b03984136ce4" name="bcftools_call" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="9c711df3258d" name="bcftools_mpileup" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="0a62420cb9cd" name="bcftools_plugin_fill_an_ac" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="8408bffd5616" name="bcftools_cnv" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-</repositories>
+<?xml version="1.0" ?>
+<repositories description="A suite of Galaxy tools designed to work with version 1.3 of the bcftools package.">
+    <repository changeset_revision="2363ef414c9b" name="bcftools_consensus" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="71186bb66ca2" name="bcftools_plugin_color_chrs" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="6cbb9c47795c" name="bcftools_plugin_tag2tag" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="baa8823f8073" name="bcftools_stats" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="7ba36babba2d" name="bcftools_merge" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="2a9cfd8f653e" name="bcftools_reheader" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="19905c025d2a" name="bcftools_norm" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="12152af85697" name="bcftools_plugin_fixploidy" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="d31a2e310a52" name="bcftools_plugin_dosage" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="e493702b19eb" name="bcftools_plugin_fill_tags" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="96d2000977ab" name="bcftools_plugin_frameshifts" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="a1213a0b7b66" name="bcftools_gtcheck" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="3ff5654b4e7d" name="bcftools_plugin_mendelian" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="6a88248893c4" name="bcftools_annotate" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="31c096c6b156" name="bcftools_plugin_missing2ref" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="cdb7b4927742" name="bcftools_filter" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="039ea3f1dea9" name="bcftools_csq" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="b0d39ef600a7" name="bcftools_roh" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="473f814b74d5" name="bcftools_query_list_samples" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="367ba501b6eb" name="bcftools_convert_to_vcf" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="e0ad88dec40d" name="bcftools_query" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="709dd8291b83" name="bcftools_isec" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="62ca6da715bf" name="bcftools_concat" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="09f5e45a8212" name="bcftools_plugin_setgt" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="d1f8f55f564d" name="bcftools_view" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="09f37afb3621" name="bcftools_convert_from_vcf" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="6f8e223f78f3" name="bcftools_plugin_impute_info" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="71c78e0eea52" name="bcftools_plugin_counts" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="0fba2c15b40d" name="bcftools_call" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="cf06b44624c7" name="bcftools_mpileup" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="026a989b7cee" name="bcftools_plugin_fill_an_ac" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="bf1f4994f104" name="bcftools_cnv" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
+</repositories>
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