# HG changeset patch
# User iuc
# Date 1737391531 0
# Node ID 7d72ee0e427ef45fbe8200e81e21a7c32c9b352e
# Parent  a76ee6c94324257955c9f59a6a0b3d02ddf42581
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71

diff -r a76ee6c94324 -r 7d72ee0e427e repository_dependencies.xml
--- a/repository_dependencies.xml	Sat Dec 14 00:01:14 2024 +0000
+++ b/repository_dependencies.xml	Mon Jan 20 16:45:31 2025 +0000
@@ -1,20 +1,28 @@
 <?xml version="1.0" ?>
 <repositories description="A suite of Galaxy tools designed to work with the cnvkit python library.">
-    <repository owner="iuc" name="cnvkit_autobin" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="505e6bbaee59"/>
-    <repository owner="iuc" name="cnvkit_access" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="25bba7640b06"/>
-    <repository owner="iuc" name="cnvkit_diagram" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="27ecb3477d34"/>
-    <repository owner="iuc" name="cnvkit_heatmap" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="26554a14f841"/>
-    <repository owner="iuc" name="cnvkit_genemetrics" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="3e1d74c9e715"/>
-    <repository owner="iuc" name="cnvkit_segment" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="33be231ce128"/>
-    <repository owner="iuc" name="cnvkit_reference" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="b45fa373a972"/>
-    <repository owner="iuc" name="cnvkit_coverage" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="5699301a3bd1"/>
-    <repository owner="iuc" name="cnvkit_fix" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="49ecf6b6f9f4"/>
-    <repository owner="iuc" name="cnvkit_breaks" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="384fa596e5d9"/>
-    <repository owner="iuc" name="cnvkit_scatter" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="02446206f574"/>
-    <repository owner="iuc" name="cnvkit_antitarget" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="dd54b5c36317"/>
-    <repository owner="iuc" name="cnvkit_batch" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="97d2b6742760"/>
-    <repository owner="iuc" name="cnvkit_target" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="428b93a3acb4"/>
-    <repository owner="iuc" name="cnvkit_segmetrics" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="86392285203a"/>
-    <repository owner="iuc" name="cnvkit_call" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="978ddcbedd60"/>
-    <repository owner="iuc" name="cnvkit_sex" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="0b34f56003dc"/>
+    <repository owner="iuc" name="cnvkit_theta" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="b10391f2e328"/>
+    <repository owner="iuc" name="cnvkit_autobin" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="9940a098cfc8"/>
+    <repository owner="iuc" name="cnvkit_access" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="45805c2763d2"/>
+    <repository owner="iuc" name="cnvkit_diagram" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="ce2ed9352a40"/>
+    <repository owner="iuc" name="cnvkit_heatmap" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="c76ce257611a"/>
+    <repository owner="iuc" name="cnvkit_genemetrics" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="86662c490315"/>
+    <repository owner="iuc" name="cnvkit_export_nexus_basic" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="5f3e6356a8de"/>
+    <repository owner="iuc" name="cnvkit_segment" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="c576f0480c66"/>
+    <repository owner="iuc" name="cnvkit_reference" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="ee80db1d39c0"/>
+    <repository owner="iuc" name="cnvkit_coverage" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="9fd2e592743f"/>
+    <repository owner="iuc" name="cnvkit_fix" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="b02eb4c918f2"/>
+    <repository owner="iuc" name="cnvkit_export_bed" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="9aeac47c89d1"/>
+    <repository owner="iuc" name="cnvkit_breaks" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="7a3b124bbe23"/>
+    <repository owner="iuc" name="cnvkit_export_cdt" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="5406089c2db7"/>
+    <repository owner="iuc" name="cnvkit_scatter" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="f96c79d645b6"/>
+    <repository owner="iuc" name="cnvkit_export_nexus_ogt" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="9ca92159a21a"/>
+    <repository owner="iuc" name="cnvkit_antitarget" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="98a7ce7d42b8"/>
+    <repository owner="iuc" name="cnvkit_batch" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="71f99b30a7f1"/>
+    <repository owner="iuc" name="cnvkit_export_vcf" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="d06c8938713a"/>
+    <repository owner="iuc" name="cnvkit_export_seg" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="dbdb21b1d395"/>
+    <repository owner="iuc" name="cnvkit_target" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="d14cfbdd41f0"/>
+    <repository owner="iuc" name="cnvkit_segmetrics" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="b28346e240f3"/>
+    <repository owner="iuc" name="cnvkit_call" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="519d405738ee"/>
+    <repository owner="iuc" name="cnvkit_export_jtv" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="d30f7b4c0722"/>
+    <repository owner="iuc" name="cnvkit_sex" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="94975590f584"/>
 </repositories>
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