view repository_dependencies.xml @ 30:acc2f30cdfa8 draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/trinity commit ec26c475a013d89b0f973f29250d660e79d4751f
author iuc
date Wed, 20 Sep 2023 15:02:58 +0000
parents c69595f62d90
children
line wrap: on
line source

<?xml version="1.0" ?>
<repositories description="Trinity tools to assemble transcript sequences from Illumina RNA-Seq data.">
    <repository owner="iuc" name="describe_samples" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="3b36efd62b3e"/>
    <repository owner="iuc" name="trinity_run_de_analysis" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="24e94d84adc9"/>
    <repository owner="iuc" name="trinity_align_and_estimate_abundance" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="2fb4ee002432"/>
    <repository owner="iuc" name="trinity" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="8f1c3df4dd49"/>
    <repository owner="iuc" name="trinity_abundance_estimates_to_matrix" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="ba3720d7e68b"/>
    <repository owner="iuc" name="trinity_define_clusters_by_cutting_tree" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="65e7dea767ea"/>
    <repository owner="iuc" name="trinity_stats" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="b2ce45417d9e"/>
    <repository owner="iuc" name="trinity_gene_to_trans_map" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="7c7fbf13aadd"/>
    <repository owner="iuc" name="trinity_analyze_diff_expr" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="9ff3765e7172"/>
    <repository owner="iuc" name="trinity_samples_qccheck" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="04bb8bb7c198"/>
    <repository owner="iuc" name="trinity_super_transcripts" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="5c1fc038df6b"/>
    <repository owner="iuc" name="trinity_contig_exn50_statistic" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="870ac06dff8e"/>
    <repository owner="iuc" name="trinity_filter_low_expr_transcripts" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="a35cba31d904"/>
</repositories>