# HG changeset patch
# User iuc
# Date 1481658268 18000
# Node ID 731ea530f416277b6ffe25eea87936c3a4df8db8
# Parent  05df12d1cf1fff88de35bbb15753fca0f839063c
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/trinity commit b9a2194247d728ef4d5a3c5511aa6ea63e9b2bcb

diff -r 05df12d1cf1f -r 731ea530f416 repository_dependencies.xml
--- a/repository_dependencies.xml	Mon Nov 21 12:01:37 2016 -0500
+++ b/repository_dependencies.xml	Tue Dec 13 14:44:28 2016 -0500
@@ -1,11 +1,12 @@
 <?xml version="1.0"?>
-<repositories description="Trinity tools to assemble transcript sequences from Illumina RNA-Seq data.">  <repository changeset_revision="d4128a4e49ca" name="trinity_analyze_diff_expr" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="5a97898c6e63" name="trinity_abundance_estimates_to_matrix" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="475652cd7d37" name="trinity" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="fba1f34838e6" name="trinity_align_and_estimate_abundance" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="34635f944495" name="trinity_run_de_analysis" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="77d0667d3207" name="trinity_samples_qccheck" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="a12bd0e2142e" name="describe_samples" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="2d2e0769164c" name="trinity_gene_to_trans_map" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="fddb6c42d432" name="trinity_filter_low_expr_transcripts" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+<repositories description="Trinity tools to assemble transcript sequences from Illumina RNA-Seq data.">  <repository changeset_revision="30c79eb31ae1" name="trinity_abundance_estimates_to_matrix" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="515119330a55" name="trinity_align_and_estimate_abundance" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="c8efaf2e5ed5" name="trinity_analyze_diff_expr" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="acff96adcbec" name="trinity_define_clusters_by_cutting_tree" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="709dc9512bca" name="describe_samples" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="3cfcc31552f3" name="trinity_filter_low_expr_transcripts" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="4ffe49475169" name="trinity_gene_to_trans_map" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="83fa9ede1259" name="trinity_run_de_analysis" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="343aa30510ca" name="trinity_samples_qccheck" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="44056084d3bc" name="trinity" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
 </repositories>