rif_resistant Report

Lineage Info
Lineage Lineage support fraction Family RD
lineage2 0.9940119760479041 East-Asian RD105
lineage2.2.2 1.0 East-Asian (Beijing) RD105;RD207

Lineage Family Spoligotype RD Agreement
CHR GENE LOCUS PRODUCT IS_SNV EFFECT POS REF ALT BIOTYPE NUCLEOTIDE CONSEQUENCE IMPACT PATHWAY
Chromosome Rv0014c GENE_Rv0014c

NA

True synonymous_variant 15890 G A protein_coding c.1581C>T p.Ser527Ser LOW

NA

Chromosome Rv0127 GENE_Rv0127

NA

True synonymous_variant 154990 G T protein_coding c.759G>T p.Arg253Arg LOW

NA

Chromosome Rv0284 GENE_Rv0284

NA

True synonymous_variant 346693 G T protein_coding c.1059G>T p.Ser353Ser LOW

NA

Chromosome Rv0372c GENE_Rv0372c

NA

True synonymous_variant 449194 G A protein_coding c.192C>T p.Gly64Gly LOW

NA

Chromosome Rv0411c GENE_Rv0411c

NA

True synonymous_variant 497491 G A protein_coding c.810C>T p.Asp270Asp LOW

NA

Chromosome Rv0667 GENE_Rv0667

NA

True missense_variant 761110 A T protein_coding c.1304A>T p.Asp435Val MODERATE

NA

Chromosome Rv0715 GENE_Rv0715

NA

True synonymous_variant 811753 C T protein_coding c.12C>T p.His4His LOW

NA

Chromosome Rv1391 GENE_Rv1391

NA

True synonymous_variant 1565566 C T protein_coding c.126C>T p.Pro42Pro LOW

NA

Chromosome Rv1630 GENE_Rv1630

NA

True synonymous_variant 1834177 A C protein_coding c.636A>C p.Arg212Arg LOW

NA

Chromosome Rv1640c GENE_Rv1640c

NA

True synonymous_variant 1849051 C T protein_coding c.2985G>A p.Pro995Pro LOW

NA

Chromosome Rv2231c GENE_Rv2231c

NA

True synonymous_variant 2505085 G A protein_coding c.615C>T p.Ala205Ala LOW

NA

Chromosome Rv2268c GENE_Rv2268c

NA

True synonymous_variant 2543395 T C protein_coding c.882A>G p.Glu294Glu LOW

NA

Chromosome Rv2357c GENE_Rv2357c

NA

True synonymous_variant 2640807 G A protein_coding c.258C>T p.Val86Val LOW

NA

Chromosome Rv2472 GENE_Rv2472

NA

True synonymous_variant 2775361 C T protein_coding c.90C>T p.Arg30Arg LOW

NA

Chromosome Rv2483c GENE_Rv2483c

NA

True synonymous_variant 2789798 G T protein_coding c.1225C>A p.Arg409Arg LOW

NA

Chromosome Rv3109 GENE_Rv3109

NA

True synonymous_variant 3477942 A G protein_coding c.294A>G p.Thr98Thr LOW

NA

Chromosome Rv3210c GENE_Rv3210c

NA

True synonymous_variant 3587446 G A protein_coding c.94C>T p.Leu32Leu LOW

NA

Chromosome Rv3799c GENE_Rv3799c

NA

True synonymous_variant 4254431 G A protein_coding c.1518C>T p.Asp506Asp LOW

NA

Chromosome Rv3799c GENE_Rv3799c

NA

True missense_variant 4254477 T C protein_coding c.1472A>G p.His491Arg MODERATE

NA

CHR GENE LOCUS PRODUCT TYPE EFFECT POS REF ALT BIOTYPE NUCLEOTIDE CONSEQUENCE IMPACT PATHWAY