Mercurial > repos > iuc > tooldistillator

comparison test-data/abricate/report.tsv @ 0:6e868bf6c38e draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tooldistillator commit 491c6fc94851aab68cb7529dd6b6fbc6caa84bf2
author iuc
date Tue, 30 Apr 2024 08:42:33 +0000
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comparison
equal deleted inserted replaced
-1:000000000000 0:6e868bf6c38e
1 #FILE SEQUENCE START END STRAND GENE COVERAGE COVERAGE_MAP GAPS %COVERAGE %IDENTITY DATABASE ACCESSION PRODUCT RESISTANCE
2 /storage/scratch/piemari/60579281/abricate/10_Enterococcus_faecalis_S17_L001.fasta contig00002 142975 143985 + bopD 1-1011/1011 =============== 0/0 100.00 98.91 vfdb NP_814691 (bopD) sugar-binding transcriptional regulator LacI family [BopD (VF0362)] [Enterococcus faecalis V583]
3 /storage/scratch/piemari/60579281/abricate/10_Enterococcus_faecalis_S17_L001.fasta contig00003 7884 11111 - fss3 1-3228/3228 =============== 0/0 100.00 99.38 vfdb NP_815578 (fss3) Enterococcus faecalis surface protein Fss3 fibrinogen binding protein [Fibrinogen binding protein (AI273)] [Enterococcus faecalis V583]
4 /storage/scratch/piemari/60579281/abricate/10_Enterococcus_faecalis_S17_L001.fasta contig00003 162314 163240 + efaA 1-927/927 =============== 0/0 100.00 99.89 vfdb NP_815739 (efaA) endocarditis specific antigen [EfaA (VF0354)] [Enterococcus faecalis V583]
5 /storage/scratch/piemari/60579281/abricate/10_Enterococcus_faecalis_S17_L001.fasta contig00006 33703 37014 + ebpA 1-3312/3312 =============== 0/0 100.00 99.49 vfdb NP_814821 (ebpA) endocarditis and biofilm-associated pilus tip protein EbpA [Ebp pili (VF0538)] [Enterococcus faecalis V583]
6 /storage/scratch/piemari/60579281/abricate/10_Enterococcus_faecalis_S17_L001.fasta contig00006 37018 38448 + ebpB 1-1431/1431 =============== 0/0 100.00 99.30 vfdb NP_814822 (ebpB) endocarditis and biofilm-associated pilus minor subunit EbpB [Ebp pili (VF0538)] [Enterococcus faecalis V583]
7 /storage/scratch/piemari/60579281/abricate/10_Enterococcus_faecalis_S17_L001.fasta contig00006 38445 40328 + ebpC 1-1878/1878 ========/====== 1/6 100.00 98.99 vfdb NP_814823 (ebpC) endocarditis and biofilm-associated pilus major subunit EbpC [Ebp pili (VF0538)] [Enterococcus faecalis V583]
8 /storage/scratch/piemari/60579281/abricate/10_Enterococcus_faecalis_S17_L001.fasta contig00006 40422 41276 + srtC 1-855/855 =============== 0/0 100.00 99.30 vfdb NP_814824 (srtC) sortase [Ebp pili (VF0538)] [Enterococcus faecalis V583]
9 /storage/scratch/piemari/60579281/abricate/10_Enterococcus_faecalis_S17_L001.fasta contig00006 44356 46374 + ace 1-2025/2025 ========/====== 2/6 99.70 96.74 vfdb NP_814829 (ace) collagen adhesin protein [Ace (VF0355)] [Enterococcus faecalis V583]
10 /storage/scratch/piemari/60579281/abricate/10_Enterococcus_faecalis_S17_L001.fasta contig00010 49447 50301 - sprE 1-855/855 =============== 0/0 100.00 98.36 vfdb NP_815515 (sprE) serine proteinase V8 family [SprE (VF0358)] [Enterococcus faecalis V583]
11 /storage/scratch/piemari/60579281/abricate/10_Enterococcus_faecalis_S17_L001.fasta contig00010 50350 51882 - gelE 1-1533/1533 =============== 0/0 100.00 98.96 vfdb NP_815516 (gelE) coccolysin [Gelatinase (VF0357)] [Enterococcus faecalis V583]
12 /storage/scratch/piemari/60579281/abricate/10_Enterococcus_faecalis_S17_L001.fasta contig00010 52117 53200 - fsrC 261-1344/1344 ..============= 0/0 80.65 99.26 vfdb NP_815517 (fsrC) histidine kinase putative [Fsr (VF0360)] [Enterococcus faecalis V583]
13 /storage/scratch/piemari/60579281/abricate/10_Enterococcus_faecalis_S17_L001.fasta contig00018 14420 15232 - cpsK 1-813/813 =============== 0/0 100.00 99.88 vfdb NP_816131 (cpsK) ABC transporter permease protein [Capsule (VF0361)] [Enterococcus faecalis V583]
14 /storage/scratch/piemari/60579281/abricate/10_Enterococcus_faecalis_S17_L001.fasta contig00018 15232 16575 - cpsJ 1-1344/1344 =============== 0/0 100.00 98.96 vfdb NP_816132 (cpsJ) ABC transporter ATP-binding protein [Capsule (VF0361)] [Enterococcus faecalis V583]
15 /storage/scratch/piemari/60579281/abricate/10_Enterococcus_faecalis_S17_L001.fasta contig00018 16601 17739 - cpsI 1-1140/1140 ========/====== 1/1 99.91 98.33 vfdb NP_816133 (cpsI) UDP-galactopyranose mutase [Capsule (VF0361)] [Enterococcus faecalis V583]
16 /storage/scratch/piemari/60579281/abricate/10_Enterococcus_faecalis_S17_L001.fasta contig00018 17798 18196 - cpsH 1-399/399 =============== 0/0 100.00 97.49 vfdb NP_816134 (cpsH) lipoprotein [Capsule (VF0361)] [Enterococcus faecalis V583]
17 /storage/scratch/piemari/60579281/abricate/10_Enterococcus_faecalis_S17_L001.fasta contig00018 18214 20666 - cpsG 1-2454/2454 ========/====== 1/1 99.96 99.51 vfdb NP_816135 (cpsG) MurB family protein [Capsule (VF0361)] [Enterococcus faecalis V583]
18 /storage/scratch/piemari/60579281/abricate/10_Enterococcus_faecalis_S17_L001.fasta contig00018 20736 23245 - cpsE 1-2510/2511 =============== 0/0 99.96 99.40 vfdb NP_816137 (cpsE) glycosyl transferase group 2 family protein [Capsule (VF0361)] [Enterococcus faecalis V583]
19 /storage/scratch/piemari/60579281/abricate/10_Enterococcus_faecalis_S17_L001.fasta contig00018 23315 24781 - cpsD 1-1467/1467 =============== 0/0 100.00 98.91 vfdb NP_816138 (cpsD) glycosyl transferase group 2 family protein [Capsule (VF0361)] [Enterococcus faecalis V583]
20 /storage/scratch/piemari/60579281/abricate/10_Enterococcus_faecalis_S17_L001.fasta contig00018 24800 25969 - cpsC 1-1170/1170 =============== 0/0 100.00 99.57 vfdb NP_816139 (cpsC) teichoic acid biosynthesis protein putative [Capsule (VF0361)] [Enterococcus faecalis V583]
21 /storage/scratch/piemari/60579281/abricate/10_Enterococcus_faecalis_S17_L001.fasta contig00018 26443 27243 - cpsB 1-801/801 =============== 0/0 100.00 99.50 vfdb NP_816140 (cpsB) phosphatidate cytidylyltransferase [Capsule (VF0361)] [Enterococcus faecalis V583]
22 /storage/scratch/piemari/60579281/abricate/10_Enterococcus_faecalis_S17_L001.fasta contig00018 27240 28055 - cpsA 1-816/816 =============== 0/0 100.00 99.51 vfdb NP_816141 (cpsA) undecaprenyl diphosphate synthase [Capsule (VF0361)] [Enterococcus faecalis V583]
23 /storage/scratch/piemari/60579281/abricate/10_Enterococcus_faecalis_S17_L001.fasta contig00018 36270 40580 - fss2 1-4305/4956 ========/=====. 11/22 86.70 92.92 vfdb NP_816151 (fss2) Enterococcus faecalis surface protein Fss2 fibrinogen binding protein [Fibrinogen binding protein (AI272)] [Enterococcus faecalis V583]
24 /storage/scratch/piemari/60579281/abricate/10_Enterococcus_faecalis_S17_L001.fasta contig00023 14087 18004 + prgB/asc10 1-3918/3918 ========/====== 2/4 99.95 94.26 vfdb NP_817031 (prgB/asc10) aggregation substance PrgB/Asc10 [AS (VF0352)] [Enterococcus faecalis V583]
25 /storage/scratch/piemari/60579281/abricate/10_Enterococcus_faecalis_S17_L001.fasta contig00042 2539 8502 - fss1 1-5964/5964 =============== 0/0 100.00 98.31 vfdb NP_813892 (fss1) Enterococcus faecalis surface protein Fss1 fibrinogen binding protein [Fibrinogen binding protein (AI271)] [Enterococcus faecalis V583]